Cow genome map

Conread name: rdbla0112_h19.y1

Conread position: 141-336
Cow position: chr22:44469012-44468810 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 68

Conread position: 145-438
Cow position: chr22:5927762-5928049 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 144, 96

Conread position: 148-324
Cow position: chr22:17074567-17074393 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 153-427
Cow position: chr22:139118-139377 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 139, 50

Conread position: 160-427
Cow position: chr22:17780541-17780799 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 159

Conread position: 160-437
Cow position: chr22:34675707-34675434 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 157

Conread position: 160-438
Cow position: chr22:5622537-5622805 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 20

Conread position: 161-380
Cow position: chr22:22999778-22999556 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 130, 101

Conread position: 161-383
Cow position: chr22:7301657-7301876 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 137, 13

Conread position: 164-290
Cow position: chr22:30919429-30919303 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 166-377
Cow position: chr22:4753575-4753790 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 89

Conread position: 166-425
Cow position: chr22:15358427-15358172 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 208

Conread position: 167-309
Cow position: chr22:3063571-3063712 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 134, 12

Conread position: 167-324
Cow position: chr22:23751001-23751161 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 125, 8

Conread position: 167-347
Cow position: chr22:32690260-32690439 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 124, 74

Conread position: 167-389
Cow position: chr22:41245430-41245201 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 98, 25

Conread position: 167-420
Cow position: chr22:13274669-13274414 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 157

Conread position: 167-427
Cow position: chr22:11778431-11778685 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 32

Conread position: 167-427
Cow position: chr22:27224307-27224051 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 64, 37

Conread position: 167-438
Cow position: chr22:15914554-15914804 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 10

Conread position: 167-438
Cow position: chr22:19652791-19653073 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 120, 38

Conread position: 168-374
Cow position: chr22:39983017-39983228 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 170-347
Cow position: chr22:6859062-6859234 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 19

Conread position: 170-427
Cow position: chr22:33386333-33386582 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 31

Conread position: 171-303
Cow position: chr22:20840045-20839913 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 123

Conread position: 171-359
Cow position: chr22:13235700-13235507 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 74

Conread position: 171-391
Cow position: chr22:30429791-30429570 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 90, 33

Conread position: 171-427
Cow position: chr22:43262624-43262381 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 31

Conread position: 173-365
Cow position: chr22:7287686-7287487 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 173-376
Cow position: chr22:43352015-43352223 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 17

Conread position: 173-381
Cow position: chr22:31192403-31192612 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 118, 143

Conread position: 173-385
Cow position: chr22:5384827-5384613 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 54

Conread position: 173-387
Cow position: chr22:9594370-9594147 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 103, 19

Conread position: 173-389
Cow position: chr22:16234329-16234107 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 173-419
Cow position: chr22:18486755-18486993 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 140, 68

Conread position: 173-422
Cow position: chr22:29441090-29441331 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 191

Conread position: 173-426
Cow position: chr22:19040194-19040440 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 33

Conread position: 173-438
Cow position: chr22:13188053-13187793 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 31

Conread position: 173-438
Cow position: chr22:25715179-25714919 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 68

Conread position: 173-438
Cow position: chr22:42612634-42612371 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 82

Conread position: 174-293
Cow position: chr22:10555328-10555445 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 174-293
Cow position: chr22:27469079-27468959 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 174-302
Cow position: chr22:33763311-33763437 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 174-353
Cow position: chr22:23037572-23037757 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 148

Conread position: 174-366
Cow position: chr22:15424308-15424112 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 69, 29

Conread position: 174-371
Cow position: chr22:876453-876247 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 174-371
Cow position: chr22:4036748-4036553 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 17

Conread position: 174-376
Cow position: chr22:17184512-17184720 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 112, 0

Conread position: 174-377
Cow position: chr22:2434387-2434179 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 37

Conread position: 174-381
Cow position: chr22:29868440-29868644 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 143, 30

Conread position: 174-385
Cow position: chr22:28672326-28672099 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 12

Conread position: 174-387
Cow position: chr22:28685499-28685286 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 112, 67

Conread position: 174-427
Cow position: chr22:9466782-9466536 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 32

Conread position: 174-427
Cow position: chr22:41389280-41389032 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 117, 67

Conread position: 174-437
Cow position: chr22:23009770-23010026 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 63, 154

Conread position: 174-438
Cow position: chr22:32221804-32221556 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 251, 16

Conread position: 174-438
Cow position: chr22:45355550-45355291 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 119, 67

Conread position: 175-282
Cow position: chr22:21368958-21369063 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 91

Conread position: 175-330
Cow position: chr22:33067129-33066973 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 136

Conread position: 175-427
Cow position: chr22:22210070-22210319 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 41

Conread position: 175-427
Cow position: chr22:44835827-44835572 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 31

Conread position: 175-431
Cow position: chr22:42945881-42946136 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 51

Conread position: 176-284
Cow position: chr22:10414565-10414673 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 176-338
Cow position: chr22:32053545-32053382 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 179-372
Cow position: chr22:13921516-13921329 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 179-427
Cow position: chr22:2913445-2913196 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 66

Conread position: 179-427
Cow position: chr22:13057538-13057771 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 123

Conread position: 180-302
Cow position: chr22:30521063-30520941 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-367
Cow position: chr22:29004260-29004443 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 181-356
Cow position: chr22:45291487-45291311 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 150

Conread position: 181-427
Cow position: chr22:23580679-23580916 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 120, 150

Conread position: 181-438
Cow position: chr22:19738422-19738660 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 246, 76

Conread position: 181-438
Cow position: chr22:26941954-26941707 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 115, 25

Conread position: 182-359
Cow position: chr22:1081954-1081771 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 83, 73

Conread position: 183-319
Cow position: chr22:17835301-17835167 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 183-331
Cow position: chr22:37554352-37554502 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 82

Conread position: 183-437
Cow position: chr22:21349355-21349602 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 73

Conread position: 183-438
Cow position: chr22:26764192-26763944 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 109, 23

Conread position: 184-426
Cow position: chr22:44923894-44924134 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 63

Conread position: 186-438
Cow position: chr22:6574906-6574652 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 55

Conread position: 193-438
Cow position: chr22:4651334-4651093 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 188

Conread position: 194-367
Cow position: chr22:15398424-15398602 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 197-337
Cow position: chr22:19208117-19207973 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 48

Conread position: 197-342
Cow position: chr22:23270196-23270346 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 198-369
Cow position: chr22:19262979-19263159 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 200-427
Cow position: chr22:1563-1353 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 41

Conread position: 201-438
Cow position: chr22:22997623-22997390 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 97, 160

Conread position: 202-438
Cow position: chr22:26760858-26760628 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 88, 64

Conread position: 204-427
Cow position: chr22:26057527-26057304 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 109

Conread position: 209-354
Cow position: chr22:1277208-1277063 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 82, 63

Conread position: 213-427
Cow position: chr22:14119111-14118904 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 88, 100

Conread position: 213-438
Cow position: chr22:23861021-23861236 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 143

Conread position: 214-431
Cow position: chr22:10649647-10649858 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 164

Conread position: 222-438
Cow position: chr22:39293618-39293832 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 32

Conread position: 224-418
Cow position: chr22:12535659-12535846 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 34

Conread position: 236-374
Cow position: chr22:23016847-23016989 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 31

Conread position: 254-438
Cow position: chr22:26376359-26376183 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 63

Conread position: 259-427
Cow position: chr22:36280331-36280166 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 110

Conread position: 266-427
Cow position: chr22:42605719-42605555 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 116

Conread position: 290-438
Cow position: chr22:11745852-11745994 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 139, 13

Conread position: 317-429
Cow position: chr22:15666238-15666134 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Show alignments to all cow chromosomes.