Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               141-336
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               145-438
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               144, 96
               

               Conread position:
               148-324
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               153-427
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 159
               

               Conread position:
               160-437
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 157
               

               Conread position:
               160-438
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               161-380
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               130, 101
               

               Conread position:
               161-383
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               137, 13
               

               Conread position:
               164-290
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-377
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               104, 89
               

               Conread position:
               166-425
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 208
               

               Conread position:
               167-309
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               134, 12
               

               Conread position:
               167-324
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               125, 8
               

               Conread position:
               167-347
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               167-389
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               98, 25
               

               Conread position:
               167-420
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 157
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               125, 10
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               120, 38
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               170-347
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               170-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 31
               

               Conread position:
               171-303
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 123
               

               Conread position:
               171-359
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               171-391
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               171-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 31
               

               Conread position:
               173-365
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               173-376
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               173-381
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               118, 143
               

               Conread position:
               173-385
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               173-387
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               173-389
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               173-419
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               173-422
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 191
               

               Conread position:
               173-426
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 68
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 82
               

               Conread position:
               174-293
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               174-293
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               174-302
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               174-353
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               61, 148
               

               Conread position:
               174-366
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               174-371
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               174-371
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               174-376
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               174-381
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               143, 30
               

               Conread position:
               174-385
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               174-387
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               112, 67
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               117, 67
               

               Conread position:
               174-437
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 154
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               251, 16
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               119, 67
               

               Conread position:
               175-282
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               175-330
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 136
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 41
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               112, 31
               

               Conread position:
               175-431
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 51
               

               Conread position:
               176-284
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               176-338
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               179-372
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               179-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               179-427
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               59, 123
               

               Conread position:
               180-302
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-367
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               181-356
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               123, 150
               

               Conread position:
               181-427
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               120, 150
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               246, 76
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               182-359
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               83, 73
               

               Conread position:
               183-319
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               183-331
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               115, 82
               

               Conread position:
               183-437
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               183-438
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               184-426
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               186-438
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 55
               

               Conread position:
               193-438
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 188
               

               Conread position:
               194-367
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               197-337
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               197-342
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               198-369
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               200-427
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               97, 41
               

               Conread position:
               201-438
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               97, 160
               

               Conread position:
               202-438
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               204-427
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               209-354
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               82, 63
               

               Conread position:
               213-427
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               88, 100
               

               Conread position:
               213-438
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 143
               

               Conread position:
               214-431
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 164
               

               Conread position:
               222-438
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               224-418
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               236-374
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               254-438
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               259-427
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               266-427
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               290-438
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               317-429
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.