Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               142-377
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               156, 37
               

               Conread position:
               160-279
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               160-418
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               160-438
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               138, 10
               

               Conread position:
               161-427
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               162-299
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               162-435
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               167-353
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 94
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               124, 97
               

               Conread position:
               167-388
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               128, 39
               

               Conread position:
               167-412
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               123, 201
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               120, 98
               

               Conread position:
               171-286
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 82
               

               Conread position:
               171-299
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-358
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               146, 132
               

               Conread position:
               171-374
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               119, 94
               

               Conread position:
               171-416
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               134, 44
               

               Conread position:
               172-362
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               172-426
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               172-427
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               92, 81
               

               Conread position:
               172-427
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 171
               

               Conread position:
               173-291
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               173-299
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               173-377
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               173-395
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               173-408
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               121, 185
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               110, 203
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 197
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               142, 29
               

               Conread position:
               173-430
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               114, 187
               

               Conread position:
               173-436
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               114, 200
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               254, 27
               

               Conread position:
               174-365
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               113, 88
               

               Conread position:
               174-384
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               174-424
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 25
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 86
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               126, 29
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               175-320
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               175-345
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               123, 74
               

               Conread position:
               175-380
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               111, 28
               

               Conread position:
               175-387
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               175-388
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               115, 209
               

               Conread position:
               175-436
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               175-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 134
               

               Conread position:
               176-372
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               182-430
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               124, 119
               

               Conread position:
               192-335
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               100, 125
               

               Conread position:
               192-377
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               194-431
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               196-420
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               96, 165
               

               Conread position:
               196-438
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               196-438
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               74, 66
               

               Conread position:
               198-422
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               199-438
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               200-438
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               201-340
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               201-427
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 11
               

               Conread position:
               207-373
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               214-427
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               223-370
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               242-427
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               244-391
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               258-427
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 62
               

               Conread position:
               260-372
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.