Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               144-293
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               149-376
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 46
               

               Conread position:
               160-438
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               138, 35
               

               Conread position:
               164-315
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               165-293
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               166-351
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               137, 33
               

               Conread position:
               167-284
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               167-285
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               167-345
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               134, 98
               

               Conread position:
               167-381
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 55
               

               Conread position:
               167-413
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 74
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               171-299
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               171-402
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               98, 35
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               130, 35
               

               Conread position:
               172-339
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               172-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               173-344
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 143
               

               Conread position:
               173-359
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               173-380
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 89
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               41, 87
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               114, 32
               

               Conread position:
               173-437
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               123, 68
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 193
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               174-374
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               129, 67
               

               Conread position:
               174-408
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               126, 97
               

               Conread position:
               174-426
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               174-426
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               118, 138
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 42
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               91, 144
               

               Conread position:
               174-430
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               100, 16
               

               Conread position:
               174-436
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               126, 77
               

               Conread position:
               175-339
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               141, 39
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               176-374
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               118, 178
               

               Conread position:
               176-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               149, 97
               

               Conread position:
               179-396
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 189
               

               Conread position:
               179-431
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               180-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               119, 42
               

               Conread position:
               181-430
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               108, 144
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               182-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               102, 123
               

               Conread position:
               182-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               183-425
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 174
               

               Conread position:
               184-426
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               102, 183
               

               Conread position:
               185-427
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               107, 40
               

               Conread position:
               192-368
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 6
               

               Conread position:
               194-377
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 141
               

               Conread position:
               200-379
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               119, 38
               

               Conread position:
               205-427
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               87, 111
               

               Conread position:
               206-389
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               95, 79
               

               Conread position:
               214-392
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 107
               

               Conread position:
               224-430
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               231-438
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               109, 142
               

               Conread position:
               234-422
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               61, 146
               

               Conread position:
               235-435
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 6
               

               Conread position:
               248-433
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               249-377
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               249-425
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               253-438
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               267-438
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               297-427
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 77
               
Show alignments to all cow chromosomes.