Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               155-438
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               158-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               140, 117
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 174
               

               Conread position:
               163-427
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               124, 38
               

               Conread position:
               164-438
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               167-294
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-377
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               167-384
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               167-419
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               136, 39
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               120, 28
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               170-380
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               114, 145
               

               Conread position:
               171-321
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 94
               

               Conread position:
               171-326
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               151, 100
               

               Conread position:
               171-371
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               171-422
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 59
               

               Conread position:
               171-427
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               115, 202
               

               Conread position:
               172-264
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               172-293
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-373
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               114, 83
               

               Conread position:
               172-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               173-350
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 62
               

               Conread position:
               173-377
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               172, 29
               

               Conread position:
               173-437
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               123, 68
               

               Conread position:
               174-374
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               174-380
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 146
               

               Conread position:
               174-381
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               117, 171
               

               Conread position:
               174-387
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               35, 151
               

               Conread position:
               174-397
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               174-425
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 194
               

               Conread position:
               175-425
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               112, 183
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 199
               

               Conread position:
               176-355
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               111, 65
               

               Conread position:
               179-350
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               179-429
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 186
               

               Conread position:
               179-431
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               181-420
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               117, 85
               

               Conread position:
               182-436
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               122, 43
               

               Conread position:
               183-377
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               183-438
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               184-345
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               185-426
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               190-427
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               192-422
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               192-427
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               109, 31
               

               Conread position:
               192-427
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               201-374
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               201-427
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 70
               

               Conread position:
               201-427
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               204-438
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               223, 99
               

               Conread position:
               212-426
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               215-438
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               226-384
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               243-430
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               249-430
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               253-422
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 65
               

               Conread position:
               266-427
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               313-438
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               114, 59
               
Show alignments to all cow chromosomes.