Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               157-345
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               164-261
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-438
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 28
               

               Conread position:
               165-426
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               112, 48
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 61
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 201
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               124, 99
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               134, 37
               

               Conread position:
               170-378
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 170
               

               Conread position:
               170-438
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 63
               

               Conread position:
               171-360
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               171-379
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 70
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 206
               

               Conread position:
               172-425
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               115, 61
               

               Conread position:
               173-278
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               173-299
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               173-310
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               173-373
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               113, 158
               

               Conread position:
               173-376
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 80
               

               Conread position:
               173-388
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               173-420
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               93, 189
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               111, 67
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               174-293
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               174-299
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-315
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-359
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               126, 81
               

               Conread position:
               174-372
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               136, 30
               

               Conread position:
               174-374
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               141, 30
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               174-426
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               121, 229
               

               Conread position:
               174-426
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 143
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               243, 129
               

               Conread position:
               174-436
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 30
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               175-384
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               175-430
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               176-420
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               118, 7
               

               Conread position:
               181-384
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               182-322
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               182-426
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               182-430
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               183-382
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               189-427
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               105, 82
               

               Conread position:
               191-299
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               196-427
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               198-378
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               100, 119
               

               Conread position:
               198-427
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               99, 129
               

               Conread position:
               201-349
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               201-355
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               202-384
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               202-427
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               212-427
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               215-391
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               219-427
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               223-438
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               23, 148
               

               Conread position:
               241-373
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 0
               
Show alignments to all cow chromosomes.