Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               160-299
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               162-391
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               163-438
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               185, 93
               

               Conread position:
               164-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               166-391
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               129, 38
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 40
               

               Conread position:
               167-299
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 142
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 39
               

               Conread position:
               167-424
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               151, 69
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 115
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 199
               

               Conread position:
               170-430
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               121, 13
               

               Conread position:
               171-365
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 87
               

               Conread position:
               171-377
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               171-389
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 165
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 205
               

               Conread position:
               173-374
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               173-377
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 82
               

               Conread position:
               174-318
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               174-359
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               174-360
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               140, 88
               

               Conread position:
               174-389
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               112, 188
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               121, 26
               

               Conread position:
               174-436
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               123, 115
               

               Conread position:
               174-436
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 201
               

               Conread position:
               174-437
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               124, 33
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               65, 199
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               124, 30
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               175-371
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               128, 66
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               176-427
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               176-427
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 69
               

               Conread position:
               176-427
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               176-431
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               105, 28
               

               Conread position:
               179-326
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               179-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               179-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               96, 62
               

               Conread position:
               180-438
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               121, 109
               

               Conread position:
               180-438
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               106, 66
               

               Conread position:
               181-359
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               181-382
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               182-438
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               182-438
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               184-292
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               190-380
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               196-374
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               199-406
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               91, 209
               

               Conread position:
               202-389
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 155
               

               Conread position:
               211-427
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               218-371
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               226-357
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               231-427
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 142
               

               Conread position:
               251-427
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               67, 52
               

               Conread position:
               257-423
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               32, 121
               
Show alignments to all cow chromosomes.