Cow genome map
| Conread name: | rdbla0112_h19.y1 |
| Conread position: | 143-427 |
| Cow position: | chr5:24175603-24175321 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 152-436 |
| Cow position: | chr5:27008119-27007842 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 160-296 |
| Cow position: | chr5:26370416-26370281 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 160-315 |
| Cow position: | chr5:33697338-33697492 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 131, 15 |
| Conread position: | 160-346 |
| Cow position: | chr5:38936378-38936560 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 156, 48 |
| Conread position: | 160-401 |
| Cow position: | chr5:50860080-50859841 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 160-422 |
| Cow position: | chr5:14154360-14154109 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 160-422 |
| Cow position: | chr5:36487478-36487737 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 197 |
| Conread position: | 160-427 |
| Cow position: | chr5:49946124-49945866 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 160-427 |
| Cow position: | chr5:64399219-64398967 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 143, 15 |
| Conread position: | 160-438 |
| Cow position: | chr5:4631313-4631061 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 269, 46 |
| Conread position: | 161-370 |
| Cow position: | chr5:46798458-46798245 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 128, 101 |
| Conread position: | 162-438 |
| Cow position: | chr5:38629500-38629231 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 163-321 |
| Cow position: | chr5:39753443-39753605 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 165-296 |
| Cow position: | chr5:33369664-33369536 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 165-427 |
| Cow position: | chr5:25919425-25919678 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 126, 15 |
| Conread position: | 166-383 |
| Cow position: | chr5:67788724-67788509 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 166-438 |
| Cow position: | chr5:27411195-27411456 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 166-438 |
| Cow position: | chr5:39442507-39442236 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 85 |
| Conread position: | 167-373 |
| Cow position: | chr5:56385423-56385216 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 126, 98 |
| Conread position: | 167-378 |
| Cow position: | chr5:50425278-50425489 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 134, 74 |
| Conread position: | 167-425 |
| Cow position: | chr5:34914347-34914598 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 120, 23 |
| Conread position: | 167-427 |
| Cow position: | chr5:29756546-29756279 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 167-427 |
| Cow position: | chr5:66190194-66189941 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 128, 118 |
| Conread position: | 167-438 |
| Cow position: | chr5:27419519-27419788 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 167-438 |
| Cow position: | chr5:40387672-40387933 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 112 |
| Conread position: | 167-438 |
| Cow position: | chr5:55089351-55089080 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 118, 199 |
| Conread position: | 170-427 |
| Cow position: | chr5:30333156-30332898 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 171-299 |
| Cow position: | chr5:17874310-17874183 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 171-346 |
| Cow position: | chr5:62639110-62638929 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 171-377 |
| Cow position: | chr5:15837689-15837895 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 171-421 |
| Cow position: | chr5:48178176-48178427 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 115, 199 |
| Conread position: | 171-427 |
| Cow position: | chr5:13044206-13044439 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 171-436 |
| Cow position: | chr5:68081775-68082034 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 127, 30 |
| Conread position: | 172-343 |
| Cow position: | chr5:21356687-21356857 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 131, 20 |
| Conread position: | 172-427 |
| Cow position: | chr5:67149813-67150057 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 120, 145 |
| Conread position: | 173-293 |
| Cow position: | chr5:39134056-39134177 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 173-321 |
| Cow position: | chr5:48067902-48067753 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 173-361 |
| Cow position: | chr5:3059121-3058934 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 173-374 |
| Cow position: | chr5:41605613-41605804 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 167, 28 |
| Conread position: | 173-381 |
| Cow position: | chr5:25681157-25681358 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 100, 117 |
| Conread position: | 173-389 |
| Cow position: | chr5:68329785-68330005 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 173-391 |
| Cow position: | chr5:48758144-48757920 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 113, 142 |
| Conread position: | 173-427 |
| Cow position: | chr5:18695359-18695132 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 173-427 |
| Cow position: | chr5:27102590-27102840 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 113, 192 |
| Conread position: | 173-427 |
| Cow position: | chr5:54090236-54089987 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 173-427 |
| Cow position: | chr5:63188128-63188371 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 143, 5 |
| Conread position: | 173-437 |
| Cow position: | chr5:49567625-49567373 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 146, 33 |
| Conread position: | 173-438 |
| Cow position: | chr5:26262462-26262733 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 154 |
| Conread position: | 173-438 |
| Cow position: | chr5:29844484-29844220 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 208 |
| Conread position: | 173-438 |
| Cow position: | chr5:57381749-57381482 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 125, 68 |
| Conread position: | 174-354 |
| Cow position: | chr5:21194920-21195100 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 123, 143 |
| Conread position: | 174-362 |
| Cow position: | chr5:23640816-23641000 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 174-363 |
| Cow position: | chr5:42316712-42316899 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 174-378 |
| Cow position: | chr5:23527427-23527638 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 174-384 |
| Cow position: | chr5:3649261-3649470 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 174-385 |
| Cow position: | chr5:38738985-38738783 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 67 |
| Conread position: | 174-388 |
| Cow position: | chr5:58344061-58343843 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 120, 210 |
| Conread position: | 174-420 |
| Cow position: | chr5:45396210-45396450 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 129, 86 |
| Conread position: | 174-427 |
| Cow position: | chr5:17028298-17028047 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 113, 199 |
| Conread position: | 174-427 |
| Cow position: | chr5:28945858-28946108 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 174-427 |
| Cow position: | chr5:48404993-48405223 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 174-436 |
| Cow position: | chr5:15483238-15482979 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 207 |
| Conread position: | 174-436 |
| Cow position: | chr5:23529080-23529337 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 112, 88 |
| Conread position: | 174-436 |
| Cow position: | chr5:40711244-40711490 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 174-438 |
| Cow position: | chr5:25899673-25899929 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 174-438 |
| Cow position: | chr5:27615715-27615456 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 174-438 |
| Cow position: | chr5:39695854-39695591 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 121, 198 |
| Conread position: | 174-438 |
| Cow position: | chr5:41598509-41598772 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 124, 198 |
| Conread position: | 174-438 |
| Cow position: | chr5:41604826-41604566 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 194 |
| Conread position: | 175-349 |
| Cow position: | chr5:18276679-18276504 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 175-349 |
| Cow position: | chr5:53145546-53145730 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 175-374 |
| Cow position: | chr5:63328698-63328894 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 28 |
| Conread position: | 175-426 |
| Cow position: | chr5:23366567-23366811 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 175-426 |
| Cow position: | chr5:48573579-48573813 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 116, 54 |
| Conread position: | 175-438 |
| Cow position: | chr5:37069083-37068831 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 62 |
| Conread position: | 176-299 |
| Cow position: | chr5:17944324-17944202 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 176-337 |
| Cow position: | chr5:27293469-27293630 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 155 |
| Conread position: | 176-436 |
| Cow position: | chr5:41946047-41945791 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 179-438 |
| Cow position: | chr5:1949860-1950122 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 179-438 |
| Cow position: | chr5:39875322-39875066 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 179-438 |
| Cow position: | chr5:41637060-41636812 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 123, 28 |
| Conread position: | 180-377 |
| Cow position: | chr5:47680820-47681023 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 180-438 |
| Cow position: | chr5:58748964-58748709 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 111, 45 |
| Conread position: | 181-354 |
| Cow position: | chr5:36027954-36028126 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 181-373 |
| Cow position: | chr5:1349598-1349794 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 181-377 |
| Cow position: | chr5:3442639-3442447 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 116, 25 |
| Conread position: | 181-423 |
| Cow position: | chr5:47836745-47836504 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 86 |
| Conread position: | 181-426 |
| Cow position: | chr5:58320275-58320514 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 90 |
| Conread position: | 181-437 |
| Cow position: | chr5:41334805-41334548 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 163 |
| Conread position: | 182-427 |
| Cow position: | chr5:1343662-1343900 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 182-438 |
| Cow position: | chr5:17267699-17267953 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 182-438 |
| Cow position: | chr5:28035938-28035682 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 183-427 |
| Cow position: | chr5:40234305-40234075 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 81 |
| Conread position: | 183-438 |
| Cow position: | chr5:73556007-73556250 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 184-427 |
| Cow position: | chr5:7552228-7552464 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 191-420 |
| Cow position: | chr5:60647126-60646918 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 192-328 |
| Cow position: | chr5:17097893-17097759 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 192-438 |
| Cow position: | chr5:26594914-26595165 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 100, 185 |
| Conread position: | 193-390 |
| Cow position: | chr5:44151301-44151510 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 196 |
| Conread position: | 196-371 |
| Cow position: | chr5:69773729-69773556 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 197-371 |
| Cow position: | chr5:21530925-21531104 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 90, 156 |
| Conread position: | 197-426 |
| Cow position: | chr5:23536360-23536125 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 173 |
| Conread position: | 197-438 |
| Cow position: | chr5:18554072-18553837 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 90, 164 |
| Conread position: | 197-438 |
| Cow position: | chr5:59449393-59449632 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 106, 44 |
| Conread position: | 198-427 |
| Cow position: | chr5:34279429-34279647 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 198-438 |
| Cow position: | chr5:4927381-4927625 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 199-416 |
| Cow position: | chr5:49655850-49656057 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 200-365 |
| Cow position: | chr5:75687149-75687323 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 201-349 |
| Cow position: | chr5:3225804-3225949 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 201-378 |
| Cow position: | chr5:42782548-42782731 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 201-383 |
| Cow position: | chr5:6987626-6987437 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 201-427 |
| Cow position: | chr5:3753026-3752812 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 202-345 |
| Cow position: | chr5:7432984-7433133 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 202-427 |
| Cow position: | chr5:51503178-51502964 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 207-391 |
| Cow position: | chr5:30978523-30978338 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 208-339 |
| Cow position: | chr5:33340969-33341104 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 208-339 |
| Cow position: | chr5:33342697-33342832 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 223-438 |
| Cow position: | chr5:73526520-73526320 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 226-427 |
| Cow position: | chr5:34184374-34184183 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 140 |
| Conread position: | 226-429 |
| Cow position: | chr5:22839329-22839520 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 227-438 |
| Cow position: | chr5:48143639-48143844 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 115 |
| Conread position: | 229-427 |
| Cow position: | chr5:17869833-17869644 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 35 |
| Conread position: | 231-427 |
| Cow position: | chr5:61487966-61488154 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 231-438 |
| Cow position: | chr5:1687969-1688172 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 235-426 |
| Cow position: | chr5:31561677-31561489 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 238-438 |
| Cow position: | chr5:6895988-6896185 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 249-427 |
| Cow position: | chr5:21534983-21535160 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 249-431 |
| Cow position: | chr5:72173145-72172976 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 249-438 |
| Cow position: | chr5:22934328-22934509 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 262-438 |
| Cow position: | chr5:35209362-35209535 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 267-438 |
| Cow position: | chr5:36486603-36486435 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 271-427 |
| Cow position: | chr5:12803616-12803466 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 295-427 |
| Cow position: | chr5:45940533-45940660 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.