Cow genome map
| Conread name: | rdbla0112_h19.y1 |
| Conread position: | 144-427 |
| Cow position: | chr6:24622735-24623006 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 154, 8 |
| Conread position: | 154-372 |
| Cow position: | chr6:24004774-24004548 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 158-377 |
| Cow position: | chr6:20255174-20255402 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 159-354 |
| Cow position: | chr6:11790208-11790005 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 160-286 |
| Cow position: | chr6:21318636-21318766 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 160-427 |
| Cow position: | chr6:52556269-52556507 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 160-430 |
| Cow position: | chr6:51294511-51294248 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 161-427 |
| Cow position: | chr6:47616391-47616640 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 161-438 |
| Cow position: | chr6:7173531-7173797 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 140, 38 |
| Conread position: | 162-316 |
| Cow position: | chr6:68838851-68839008 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 79 |
| Conread position: | 163-438 |
| Cow position: | chr6:12652426-12652163 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 166-378 |
| Cow position: | chr6:32412417-32412627 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 52 |
| Conread position: | 166-385 |
| Cow position: | chr6:36454371-36454594 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 120, 209 |
| Conread position: | 166-438 |
| Cow position: | chr6:54478926-54479197 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 132, 199 |
| Conread position: | 167-340 |
| Cow position: | chr6:23986243-23986416 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 167-359 |
| Cow position: | chr6:41687799-41687996 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 167-373 |
| Cow position: | chr6:26450541-26450326 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 167-373 |
| Cow position: | chr6:53264578-53264793 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 167-377 |
| Cow position: | chr6:16219835-16220050 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 156 |
| Conread position: | 167-378 |
| Cow position: | chr6:56860762-56860554 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 167-386 |
| Cow position: | chr6:28795557-28795334 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 167-425 |
| Cow position: | chr6:31425337-31425592 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 8 |
| Conread position: | 167-427 |
| Cow position: | chr6:6367450-6367701 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 167-427 |
| Cow position: | chr6:8317946-8318195 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 167-427 |
| Cow position: | chr6:31564110-31564371 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 167-427 |
| Cow position: | chr6:37463247-37462986 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 167-427 |
| Cow position: | chr6:37612329-37612080 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 123, 167 |
| Conread position: | 167-427 |
| Cow position: | chr6:59633343-59633102 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 167-430 |
| Cow position: | chr6:38018480-38018225 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 129, 77 |
| Conread position: | 167-436 |
| Cow position: | chr6:39157751-39158020 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 167-438 |
| Cow position: | chr6:33851577-33851842 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 97 |
| Conread position: | 167-438 |
| Cow position: | chr6:36194816-36194549 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 169-438 |
| Cow position: | chr6:41679302-41679041 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 132, 88 |
| Conread position: | 170-427 |
| Cow position: | chr6:24583014-24583252 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 20 |
| Conread position: | 171-310 |
| Cow position: | chr6:55578810-55578949 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 171-315 |
| Cow position: | chr6:17708062-17708204 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 171-389 |
| Cow position: | chr6:2899346-2899574 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 171-427 |
| Cow position: | chr6:51840505-51840244 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 213 |
| Conread position: | 171-436 |
| Cow position: | chr6:2324005-2324259 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 127, 52 |
| Conread position: | 171-438 |
| Cow position: | chr6:38453562-38453816 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 173-344 |
| Cow position: | chr6:28165042-28164866 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 173-374 |
| Cow position: | chr6:52705362-52705566 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 173-385 |
| Cow position: | chr6:47884809-47885024 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 57 |
| Conread position: | 173-389 |
| Cow position: | chr6:33917621-33917844 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 173-391 |
| Cow position: | chr6:28083795-28084020 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 140 |
| Conread position: | 173-420 |
| Cow position: | chr6:41655819-41656069 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 198 |
| Conread position: | 173-438 |
| Cow position: | chr6:6994741-6994999 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 252, 103 |
| Conread position: | 173-438 |
| Cow position: | chr6:24222941-24223202 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 130, 146 |
| Conread position: | 173-438 |
| Cow position: | chr6:24545831-24545566 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 121, 199 |
| Conread position: | 173-438 |
| Cow position: | chr6:24558095-24557837 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 68 |
| Conread position: | 173-438 |
| Cow position: | chr6:47026694-47026433 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 174-303 |
| Cow position: | chr6:33985439-33985312 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 174-354 |
| Cow position: | chr6:47192309-47192493 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 78 |
| Conread position: | 174-359 |
| Cow position: | chr6:28155938-28156133 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 174-359 |
| Cow position: | chr6:41042133-41041954 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 174-368 |
| Cow position: | chr6:15943784-15943983 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 174-372 |
| Cow position: | chr6:12421073-12421277 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 109, 184 |
| Conread position: | 174-373 |
| Cow position: | chr6:46676215-46676415 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 174-408 |
| Cow position: | chr6:64427442-64427200 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 174-420 |
| Cow position: | chr6:34235197-34235439 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 174-422 |
| Cow position: | chr6:30160534-30160291 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 174-424 |
| Cow position: | chr6:24650059-24649824 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 182, 48 |
| Conread position: | 174-427 |
| Cow position: | chr6:827491-827739 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 127, 142 |
| Conread position: | 174-427 |
| Cow position: | chr6:4163954-4164200 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 174-427 |
| Cow position: | chr6:9026730-9026486 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 174-427 |
| Cow position: | chr6:15997004-15997248 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 145, 34 |
| Conread position: | 174-427 |
| Cow position: | chr6:30701658-30701415 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 81 |
| Conread position: | 174-427 |
| Cow position: | chr6:54062879-54062630 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 174-427 |
| Cow position: | chr6:56376136-56376383 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 174-427 |
| Cow position: | chr6:63196946-63197197 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 113, 201 |
| Conread position: | 174-437 |
| Cow position: | chr6:13718981-13718719 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 204 |
| Conread position: | 174-438 |
| Cow position: | chr6:4023318-4023051 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 171 |
| Conread position: | 174-438 |
| Cow position: | chr6:7824963-7824718 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 253, 67 |
| Conread position: | 174-438 |
| Cow position: | chr6:14658816-14658557 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 174-438 |
| Cow position: | chr6:36652634-36652374 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 174-438 |
| Cow position: | chr6:45064800-45065061 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 86 |
| Conread position: | 174-438 |
| Cow position: | chr6:53674077-53673816 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 175-311 |
| Cow position: | chr6:60423127-60423266 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 113, 62 |
| Conread position: | 175-359 |
| Cow position: | chr6:37054199-37054016 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 143, 56 |
| Conread position: | 175-373 |
| Cow position: | chr6:28477383-28477181 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 175-380 |
| Cow position: | chr6:510089-510297 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 175-438 |
| Cow position: | chr6:15782299-15782566 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 123, 191 |
| Conread position: | 175-438 |
| Cow position: | chr6:59588194-59588451 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 176-370 |
| Cow position: | chr6:53939178-53938979 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 53 |
| Conread position: | 176-420 |
| Cow position: | chr6:43760568-43760343 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 176-426 |
| Cow position: | chr6:17534304-17534546 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 62 |
| Conread position: | 176-427 |
| Cow position: | chr6:40437-40684 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 179-272 |
| Cow position: | chr6:40499393-40499300 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-304 |
| Cow position: | chr6:50287565-50287692 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 179-373 |
| Cow position: | chr6:20754090-20754289 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 108, 182 |
| Conread position: | 179-438 |
| Cow position: | chr6:34549606-34549354 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 23 |
| Conread position: | 180-345 |
| Cow position: | chr6:38594030-38594196 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 108, 70 |
| Conread position: | 180-422 |
| Cow position: | chr6:35774772-35775016 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 185 |
| Conread position: | 180-427 |
| Cow position: | chr6:19427656-19427422 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 121, 23 |
| Conread position: | 180-436 |
| Cow position: | chr6:38914651-38914404 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 115, 186 |
| Conread position: | 181-343 |
| Cow position: | chr6:7707343-7707176 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 142 |
| Conread position: | 181-402 |
| Cow position: | chr6:32277151-32276929 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 181-403 |
| Cow position: | chr6:52002561-52002349 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 181-427 |
| Cow position: | chr6:3545887-3545659 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 181-427 |
| Cow position: | chr6:42618085-42617851 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 181-427 |
| Cow position: | chr6:65872096-65871860 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 182-337 |
| Cow position: | chr6:15754049-15753892 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 182-438 |
| Cow position: | chr6:6943478-6943723 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 183-367 |
| Cow position: | chr6:10237541-10237356 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 132 |
| Conread position: | 184-426 |
| Cow position: | chr6:1907726-1907510 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 185-432 |
| Cow position: | chr6:32798670-32798910 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 186-384 |
| Cow position: | chr6:1890373-1890575 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 170 |
| Conread position: | 187-436 |
| Cow position: | chr6:32676888-32677133 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 191-425 |
| Cow position: | chr6:47858483-47858258 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 191-427 |
| Cow position: | chr6:16733614-16733375 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 125 |
| Conread position: | 192-333 |
| Cow position: | chr6:25224438-25224291 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 192-438 |
| Cow position: | chr6:16676007-16675757 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 193-427 |
| Cow position: | chr6:54144500-54144274 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 195-374 |
| Cow position: | chr6:18469040-18469214 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 196-340 |
| Cow position: | chr6:29649300-29649151 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 196-427 |
| Cow position: | chr6:50034535-50034764 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 196-438 |
| Cow position: | chr6:48572685-48572928 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 174 |
| Conread position: | 197-382 |
| Cow position: | chr6:57118748-57118939 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 197-429 |
| Cow position: | chr6:3078694-3078478 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 201-438 |
| Cow position: | chr6:16626140-16625896 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 201-438 |
| Cow position: | chr6:58332076-58331841 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 202-374 |
| Cow position: | chr6:29412600-29412772 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 115 |
| Conread position: | 204-427 |
| Cow position: | chr6:18582629-18582842 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 206-389 |
| Cow position: | chr6:60503562-60503377 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 207-374 |
| Cow position: | chr6:59496402-59496230 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 208-436 |
| Cow position: | chr6:44371758-44371989 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 215-427 |
| Cow position: | chr6:9454458-9454258 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 222-438 |
| Cow position: | chr6:30474490-30474278 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 223-430 |
| Cow position: | chr6:33929378-33929587 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 227-426 |
| Cow position: | chr6:41265274-41265089 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 228-426 |
| Cow position: | chr6:51387912-51387719 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 147 |
| Conread position: | 233-427 |
| Cow position: | chr6:50317887-50318081 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 236-424 |
| Cow position: | chr6:44511391-44511215 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 236-438 |
| Cow position: | chr6:7836069-7835871 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 67, 158 |
| Conread position: | 258-427 |
| Cow position: | chr6:35415384-35415550 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 259-427 |
| Cow position: | chr6:33985104-33984944 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 270-416 |
| Cow position: | chr6:65946960-65947096 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.