Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 1-113
Cow position:
Alignm length: 116
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 16

Conread position: 2-223
Cow position:
Alignm length: 225
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-224
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 181

Conread position: 3-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-118
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-126
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-127
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-131
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 10

Conread position: 3-152
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-161
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 84

Conread position: 3-177
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 3-182
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 91

Conread position: 3-184
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-191
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 23

Conread position: 3-195
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-208
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 36, 75

Conread position: 3-209
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-210
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 99

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-220
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-220
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 31

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 79

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 14

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 72

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 153

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 57

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 88

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 154
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 108

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 93

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 153

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 15

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 192

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 108

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 192

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 84

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 15

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 162

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 135

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 168

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 12, 16

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 92

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 129

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 72

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 3-267
Cow position:
Alignm length: 268
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 4-178
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 32, 97

Conread position: 4-199
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 92, 41

Conread position: 4-208
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 144

Conread position: 4-213
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 173

Conread position: 4-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 19

Conread position: 4-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 62

Conread position: 4-224
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 87

Conread position: 5-158
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 5-201
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 82

Conread position: 5-209
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 34, 61

Conread position: 5-220
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 133

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 6-218
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 6-226
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 82

Conread position: 6-229
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 78

Conread position: 7-221
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 31, 61

Conread position: 18-226
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 8

Conread position: 22-216
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 73

Conread position: 23-216
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 71

Conread position: 23-226
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 159

Conread position: 24-186
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 24-224
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 15, 138

Conread position: 24-224
Cow position:
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 26-221
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 70, 0

Conread position: 37-220
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 123

Conread position: 37-223
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 132, 0

Conread position: 37-224
Cow position:
Alignm length: 189
Alignm identity: 152
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 40-220
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 40-227
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 82

Conread position: 43-228
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 49-224
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 237-540
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 31

Show alignments to all cow chromosomes.