Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 1-125
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-224
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 69

Conread position: 1-224
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 85

Conread position: 1-227
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 2-217
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 160

Conread position: 2-220
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 111

Conread position: 2-224
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 92

Conread position: 2-224
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-224
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 142, 16

Conread position: 3-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-127
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-138
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 3-150
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 3-154
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 3-163
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 128, 32

Conread position: 3-166
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 3-177
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 3-178
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 108

Conread position: 3-198
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 24

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 3-199
Cow position:
Alignm length: 199
Alignm identity: 160
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 99

Conread position: 3-202
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 19

Conread position: 3-203
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 37, 91

Conread position: 3-210
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-215
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 109

Conread position: 3-216
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 109

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 186

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-219
Cow position:
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 3-219
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 3-220
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 15

Conread position: 3-221
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 91

Conread position: 3-221
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 63

Conread position: 3-221
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 137

Conread position: 3-221
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 63

Conread position: 3-221
Cow position:
Alignm length: 223
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 123

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 36, 84

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 148

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 131

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 31

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 28

Conread position: 3-224
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 95

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 36, 145

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 93

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 134

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 184

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 93

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 160

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 145

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 161

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 62

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 19

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 66

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 16

Conread position: 3-224
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 159

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 79

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 135

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 3-227
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 4-221
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 92, 18

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 106, 31

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 5-127
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 5-179
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 13

Conread position: 5-215
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 5-221
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 5-229
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 34, 157

Conread position: 6-219
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 104

Conread position: 6-224
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 89

Conread position: 6-224
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 14-224
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 18-221
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 108

Conread position: 22-224
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 23-221
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 67

Conread position: 25-224
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 74

Conread position: 25-224
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 9

Conread position: 28-157
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 35-224
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 75

Conread position: 44-224
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 44-227
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.