Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 13

Conread position: 1-224
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 193

Conread position: 3-105
Cow position:
Alignm length: 106
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-113
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-113
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 25

Conread position: 3-127
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-136
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-145
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 59

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-151
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-152
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 119

Conread position: 3-154
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 3-156
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 63

Conread position: 3-159
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 3-162
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 20

Conread position: 3-163
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 66

Conread position: 3-167
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 3-169
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 109

Conread position: 3-171
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 109

Conread position: 3-174
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 20

Conread position: 3-177
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 128, 19

Conread position: 3-179
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 3-195
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 32

Conread position: 3-202
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 79

Conread position: 3-204
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 97

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 103

Conread position: 3-217
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 109

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 157

Conread position: 3-218
Cow position:
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 31

Conread position: 3-221
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 66

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 82

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 171

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 16

Conread position: 3-224
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 92

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 174

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 17

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 160

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 33, 177

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 80

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 91

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 23

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 31

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 141

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 36, 51

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 92

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 128

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 123

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 175

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 177

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 38

Conread position: 3-226
Cow position:
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-226
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 181

Conread position: 3-242
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 30, 110

Conread position: 4-126
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 4-186
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 4-198
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 9

Conread position: 4-217
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 4-219
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 121

Conread position: 4-221
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 83

Conread position: 4-221
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 18

Conread position: 4-224
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 107

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 14

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 134

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 4-224
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 94

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 18

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 76

Conread position: 4-224
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 30

Conread position: 5-113
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 5-124
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 107

Conread position: 5-216
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 197

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 5-224
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 121

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 6-219
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 6-224
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 125

Conread position: 6-224
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 94

Conread position: 7-221
Cow position:
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 19-227
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 22-224
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 79

Conread position: 25-224
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 10

Conread position: 25-224
Cow position:
Alignm length: 203
Alignm identity: 161
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 26-224
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 165

Conread position: 27-224
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 82

Conread position: 28-221
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 84

Conread position: 43-224
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 67

Conread position: 200-454
Cow position:
Alignm length: 257
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 204, 21

Conread position: 212-540
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 9

Conread position: 225-535
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 138, 16

Conread position: 226-543
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 120

Show alignments to all cow chromosomes.