Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 1-136
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 13

Conread position: 1-224
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 88

Conread position: 2-224
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 32

Conread position: 3-115
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-116
Cow position:
Alignm length: 117
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-122
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-129
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-147
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-152
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 3-153
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 144

Conread position: 3-154
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 3-155
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 113

Conread position: 3-158
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 3-161
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 3-166
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 93, 30

Conread position: 3-168
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 41

Conread position: 3-177
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-184
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 91

Conread position: 3-189
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 122

Conread position: 3-194
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-203
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 161

Conread position: 3-209
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 92

Conread position: 3-210
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 65

Conread position: 3-215
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 108

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 31

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 3-220
Cow position:
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 3-220
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 95

Conread position: 3-221
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 19

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 108

Conread position: 3-221
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 43, 109

Conread position: 3-221
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 108

Conread position: 3-221
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-222
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 203

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 100

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 201

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 158

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 79

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 159

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 32

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 100

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 156

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 131

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 112

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 36, 122

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 160

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 95

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 84

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 175

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 92

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 146

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 92

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 48

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 217

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 93, 31

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 95

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 179

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 95

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 177

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 62

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 161

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 20

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 99

Conread position: 3-225
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 139

Conread position: 3-226
Cow position:
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 95

Conread position: 3-226
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 131

Conread position: 3-227
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 108

Conread position: 4-186
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 32, 64

Conread position: 4-214
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 80

Conread position: 4-219
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 85

Conread position: 4-220
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 5-220
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 5-221
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 112

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 63

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 10, 64

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 157

Conread position: 5-227
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 157

Conread position: 6-219
Cow position:
Alignm length: 217
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 7-224
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 32, 55

Conread position: 21-221
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 142

Conread position: 21-224
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 21-224
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 93

Conread position: 22-126
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 22-224
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 17, 88

Conread position: 23-213
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 116

Conread position: 23-224
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 11

Conread position: 24-224
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 28-224
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 109

Conread position: 34-215
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 76

Conread position: 35-224
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 138

Conread position: 37-221
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 126

Conread position: 37-224
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 37-224
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 75

Conread position: 38-224
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 103, 0

Conread position: 39-220
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 45

Conread position: 43-224
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 146

Conread position: 43-224
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 53, 117

Conread position: 44-125
Cow position:
Alignm length: 83
Alignm identity: 75
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 225-469
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 178, 129

Show alignments to all cow chromosomes.