Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 3-121
Cow position: chr26:16864715-16864594 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-129
Cow position: chr26:20299560-20299678 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 3-143
Cow position: chr26:11537266-11537122 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-145
Cow position: chr26:6870837-6870692 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-156
Cow position: chr26:6476236-6476392 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 109

Conread position: 3-156
Cow position: chr26:7677175-7677019 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-162
Cow position: chr26:30752898-30753060 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-172
Cow position: chr26:2670379-2670548 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 95

Conread position: 3-178
Cow position: chr26:3026999-3027176 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 65

Conread position: 3-179
Cow position: chr26:17169271-17169092 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 3-186
Cow position: chr26:30786368-30786184 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 159

Conread position: 3-187
Cow position: chr26:4440325-4440511 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 143

Conread position: 3-199
Cow position: chr26:11269662-11269464 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 109

Conread position: 3-199
Cow position: chr26:14173504-14173305 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 3-204
Cow position: chr26:29433673-29433469 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-209
Cow position: chr26:35393656-35393865 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 87

Conread position: 3-215
Cow position: chr26:20019542-20019327 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-215
Cow position: chr26:26611897-26611682 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-216
Cow position: chr26:13183751-13183535 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-219
Cow position: chr26:23809985-23810202 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 84

Conread position: 3-220
Cow position: chr26:34265405-34265185 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position: chr26:11370134-11369917 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 42

Conread position: 3-221
Cow position: chr26:20186752-20186542 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 85

Conread position: 3-221
Cow position: chr26:20256064-20255849 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 93, 164

Conread position: 3-221
Cow position: chr26:21350942-21350726 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 163

Conread position: 3-221
Cow position: chr26:28706621-28706838 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 92

Conread position: 3-221
Cow position: chr26:30585916-30586125 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 100

Conread position: 3-222
Cow position: chr26:17288251-17288029 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 3-224
Cow position: chr26:387121-386897 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:1342854-1343078 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:1390423-1390199 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:1621088-1620872 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 33, 24

Conread position: 3-224
Cow position: chr26:1915781-1915559 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 172

Conread position: 3-224
Cow position: chr26:2201969-2201747 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 94

Conread position: 3-224
Cow position: chr26:3157556-3157332 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:3187198-3186976 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 111

Conread position: 3-224
Cow position: chr26:3199812-3199588 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:3230907-3230685 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 3-224
Cow position: chr26:3537563-3537339 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 3-224
Cow position: chr26:3556676-3556882 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 29

Conread position: 3-224
Cow position: chr26:3564598-3564822 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:3833475-3833251 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:4549051-4548826 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 65

Conread position: 3-224
Cow position: chr26:5679973-5679747 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position: chr26:6430024-6429802 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 3-224
Cow position: chr26:6843779-6844003 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:8084267-8084043 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:8738976-8739200 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:8885284-8885061 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 169

Conread position: 3-224
Cow position: chr26:9115479-9115256 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 19

Conread position: 3-224
Cow position: chr26:9694355-9694579 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position: chr26:9835912-9835685 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position: chr26:10490680-10490461 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 77

Conread position: 3-224
Cow position: chr26:12585097-12585321 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:13773492-13773270 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 207

Conread position: 3-224
Cow position: chr26:14487820-14488038 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 33, 92

Conread position: 3-224
Cow position: chr26:15145935-15145711 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:17393458-17393678 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 112

Conread position: 3-224
Cow position: chr26:17429034-17429258 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:18803928-18804153 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:19795494-19795270 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:22831597-22831819 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 153

Conread position: 3-224
Cow position: chr26:23591136-23590912 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:23889851-23889629 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 3-224
Cow position: chr26:26286301-26286076 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:30594188-30594412 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:30625173-30625396 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 46

Conread position: 3-224
Cow position: chr26:31138510-31138729 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 40

Conread position: 3-224
Cow position: chr26:34015278-34015059 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 36, 107

Conread position: 3-224
Cow position: chr26:35121801-35122025 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position: chr26:35191107-35191330 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 37, 192

Conread position: 3-224
Cow position: chr26:35423938-35423716 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 128

Conread position: 3-224
Cow position: chr26:35560620-35560844 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position: chr26:1346553-1346779 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position: chr26:3924041-3924263 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 99, 19

Conread position: 4-217
Cow position: chr26:800118-799905 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 150

Conread position: 4-224
Cow position: chr26:9558440-9558663 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position: chr26:18928715-18928499 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 35, 119

Conread position: 4-224
Cow position: chr26:22691828-22691607 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 5-184
Cow position: chr26:30725478-30725661 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 5-224
Cow position: chr26:614757-614987 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 111, 30

Conread position: 12-221
Cow position: chr26:10011553-10011342 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 76

Conread position: 23-224
Cow position: chr26:3689918-3689709 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 175

Conread position: 23-224
Cow position: chr26:3722865-3722667 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 66

Conread position: 24-221
Cow position: chr26:1012991-1012795 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 63

Conread position: 35-225
Cow position: chr26:4324307-4324498 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 36-224
Cow position: chr26:17182477-17182300 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 92, 61

Conread position: 40-224
Cow position: chr26:1088586-1088401 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 43-221
Cow position: chr26:8308366-8308544 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 21

Show alignments to all cow chromosomes.