Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 1-221
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 34

Conread position: 1-224
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 35

Conread position: 2-224
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 37, 152

Conread position: 2-224
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 3-124
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 108

Conread position: 3-128
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-144
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-147
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 109

Conread position: 3-158
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 3-161
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-163
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 3-163
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 62

Conread position: 3-179
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 23

Conread position: 3-183
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 48

Conread position: 3-192
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 95

Conread position: 3-199
Cow position:
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 3-214
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 110

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 59

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 109

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 91

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 95

Conread position: 3-217
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 3-219
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 3-220
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 3-220
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 127

Conread position: 3-220
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 30

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-221
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 16

Conread position: 3-221
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 65

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 176

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 35, 109

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 109

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 38

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 159

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 174

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 113

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 26

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 199

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 53

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 95

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 30

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 84

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 214

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 93, 31

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 144

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 36, 108

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 91

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 121

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 147

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 159

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 109

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 95

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 135

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 187

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 177

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-225
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 109

Conread position: 3-225
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-226
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 3-227
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-227
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 11

Conread position: 3-274
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 32, 109

Conread position: 4-213
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 4-214
Cow position:
Alignm length: 214
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 140

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 14

Conread position: 5-161
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 51

Conread position: 5-216
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-224
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 31, 81

Conread position: 6-219
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 128

Conread position: 9-221
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 18

Conread position: 14-224
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 18

Conread position: 19-193
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 15

Conread position: 19-224
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 143

Conread position: 21-146
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 7

Conread position: 22-179
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 89

Conread position: 23-213
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 57

Conread position: 23-216
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 108

Conread position: 24-210
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 115

Conread position: 24-224
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 24-224
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 37-199
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 37-224
Cow position:
Alignm length: 189
Alignm identity: 152
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 59, 23

Conread position: 39-224
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 16

Conread position: 44-221
Cow position:
Alignm length: 181
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 109

Conread position: 49-221
Cow position:
Alignm length: 175
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 15

Conread position: 225-540
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 183, 77

Show alignments to all cow chromosomes.