Cow genome map

Conread name: rdbla0119_i21.y1

Conread position: 1-129
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 95

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 1-224
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 177

Conread position: 1-224
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 37, 174

Conread position: 3-107
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-113
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 3-122
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 17

Conread position: 3-122
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-124
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 109

Conread position: 3-127
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 3-138
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-139
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-146
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 11

Conread position: 3-152
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 91

Conread position: 3-162
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 11

Conread position: 3-167
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 107

Conread position: 3-182
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 17

Conread position: 3-183
Cow position:
Alignm length: 184
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 120

Conread position: 3-183
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 3-193
Cow position:
Alignm length: 194
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 3-196
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 109

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 159

Conread position: 3-202
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 72

Conread position: 3-203
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 19

Conread position: 3-208
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-209
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-212
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 36, 174

Conread position: 3-213
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 31

Conread position: 3-213
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 14

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 174

Conread position: 3-220
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 172

Conread position: 3-221
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 118

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 46

Conread position: 3-221
Cow position:
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-221
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 140

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 95

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 149

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 115

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 174

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 65

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 31, 70

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 135

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 93, 39

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 65

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 70

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 36, 94

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 93

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 128

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 150

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 192

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 20

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 108

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 36, 78

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 177

Conread position: 3-224
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 16

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 143

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 158

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 159

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 14

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 34, 83

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 24

Conread position: 3-227
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 188

Conread position: 4-202
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 112

Conread position: 4-211
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 180

Conread position: 4-216
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 108

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 171

Conread position: 4-224
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 82

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 4-232
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 107

Conread position: 5-193
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 13

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 193

Conread position: 5-224
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 5-224
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 107

Conread position: 5-224
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 197

Conread position: 7-224
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 210

Conread position: 10-216
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 77

Conread position: 11-224
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 123

Conread position: 12-224
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 18-149
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 18-224
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 23-183
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 26-146
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 26-227
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 9

Conread position: 29-224
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 67, 0

Conread position: 35-224
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 35-224
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 40-217
Cow position:
Alignm length: 179
Alignm identity: 149
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 42-224
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 43-224
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 93

Conread position: 49-224
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 147

Show alignments to all cow chromosomes.