Cow genome map

Conread name: rdbla0119_m12.y1

Conread position: 26-535
Cow position:
Alignm length: 523
Alignm identity: 344
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 56

Conread position: 38-350
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 27

Conread position: 39-535
Cow position:
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 42-382
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 42-535
Cow position:
Alignm length: 513
Alignm identity: 343
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 167, 93

Conread position: 45-295
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 64

Conread position: 45-295
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 6, 38

Conread position: 49-535
Cow position:
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 50-454
Cow position:
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 50-535
Cow position:
Alignm length: 493
Alignm identity: 323
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 124, 23

Conread position: 52-402
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 40

Conread position: 53-264
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 82

Conread position: 54-284
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 31

Conread position: 54-319
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 53, 18

Conread position: 54-533
Cow position:
Alignm length: 486
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 54-533
Cow position:
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 54-535
Cow position:
Alignm length: 491
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 115

Conread position: 54-535
Cow position:
Alignm length: 488
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 55-261
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 26

Conread position: 55-272
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 101

Conread position: 55-418
Cow position:
Alignm length: 374
Alignm identity: 250
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 108

Conread position: 55-504
Cow position:
Alignm length: 477
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 55-515
Cow position:
Alignm length: 472
Alignm identity: 305
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 26

Conread position: 55-527
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 56-501
Cow position:
Alignm length: 451
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 57-314
Cow position:
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 25

Conread position: 60-360
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 28

Conread position: 60-497
Cow position:
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 28

Conread position: 60-527
Cow position:
Alignm length: 473
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 5

Conread position: 61-383
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 87

Conread position: 61-462
Cow position:
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 21

Conread position: 62-316
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 20

Conread position: 62-348
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 52

Conread position: 62-433
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 85

Conread position: 62-535
Cow position:
Alignm length: 493
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 63-535
Cow position:
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 50

Conread position: 64-533
Cow position:
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 65-235
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 83

Conread position: 65-426
Cow position:
Alignm length: 374
Alignm identity: 243
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 79

Conread position: 65-438
Cow position:
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 66-339
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 44, 239

Conread position: 66-406
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 38

Conread position: 66-533
Cow position:
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 44

Conread position: 68-266
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 66

Conread position: 68-325
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 69-312
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 147, 35

Conread position: 69-506
Cow position:
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 78

Conread position: 69-512
Cow position:
Alignm length: 450
Alignm identity: 286
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 99

Conread position: 69-534
Cow position:
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 71-336
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 37, 57

Conread position: 71-371
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 11

Conread position: 71-535
Cow position:
Alignm length: 473
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 72-375
Cow position:
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 73-256
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 73-256
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 97

Conread position: 73-379
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 92

Conread position: 73-388
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 99

Conread position: 73-447
Cow position:
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 180

Conread position: 74-306
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 37, 9

Conread position: 74-340
Cow position:
Alignm length: 275
Alignm identity: 185
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 32

Conread position: 74-397
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 72

Conread position: 74-406
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 74-535
Cow position:
Alignm length: 467
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 75-272
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 109

Conread position: 75-354
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 67

Conread position: 75-461
Cow position:
Alignm length: 393
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 72

Conread position: 75-496
Cow position:
Alignm length: 431
Alignm identity: 280
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 40, 76

Conread position: 76-437
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 76-535
Cow position:
Alignm length: 474
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 123

Conread position: 77-530
Cow position:
Alignm length: 464
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 79-525
Cow position:
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 79-530
Cow position:
Alignm length: 460
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 81-345
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 65

Conread position: 81-461
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 27, 97

Conread position: 82-313
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 222

Conread position: 82-337
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 64

Conread position: 84-348
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 45

Conread position: 85-290
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 58

Conread position: 87-436
Cow position:
Alignm length: 375
Alignm identity: 253
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 265

Conread position: 87-533
Cow position:
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 77

Conread position: 88-453
Cow position:
Alignm length: 382
Alignm identity: 247
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 105

Conread position: 89-533
Cow position:
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 91-434
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 52

Conread position: 92-532
Cow position:
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 151

Conread position: 94-240
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 42

Conread position: 104-418
Cow position:
Alignm length: 327
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 49

Conread position: 109-436
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 58

Conread position: 119-508
Cow position:
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 71

Conread position: 128-535
Cow position:
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 133-535
Cow position:
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 166

Conread position: 143-382
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 26

Conread position: 159-462
Cow position:
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 160-440
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 77

Conread position: 167-515
Cow position:
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 168-533
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 136

Conread position: 168-534
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 120

Conread position: 168-535
Cow position:
Alignm length: 374
Alignm identity: 238
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 132, 203

Conread position: 169-317
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 169-519
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 137

Conread position: 170-383
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 119

Conread position: 171-526
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 21

Conread position: 171-535
Cow position:
Alignm length: 372
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 63

Conread position: 172-299
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 172-400
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 172-418
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 126

Conread position: 177-488
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 33

Conread position: 197-470
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 5, 102

Conread position: 197-535
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 150

Conread position: 204-456
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 93

Conread position: 205-451
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 99

Conread position: 207-522
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 10, 91

Conread position: 210-530
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 135

Conread position: 238-516
Cow position:
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 235

Conread position: 244-514
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 65, 53

Show alignments to all cow chromosomes.