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Cow genome map

           
Conread name:
           
rdbla0119_m12.y1
        

               
Conread position:
               
42-375
               

               
Cow position:
               
chr27:31151109-31151434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
46-361
               

               
Cow position:
               
chr27:29593904-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 202
               

               
Conread position:
               
47-221
               

               
Cow position:
               
chr27:2934234-2934406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chr27:2949585-2949378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
49-392
               

               
Cow position:
               
chr27:16088521-16088883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
49-396
               

               
Cow position:
               
chr27:6924816-6925167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr27:23560300-23559969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
50-524
               

               
Cow position:
               
chr27:22547658-22547204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
51-305
               

               
Cow position:
               
chr27:31386896-31386644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr27:26323173-26323415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
52-535
               

               
Cow position:
               
chr27:11435590-11435120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
53-486
               

               
Cow position:
               
chr27:4944775-4944365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
55-235
               

               
Cow position:
               
chr27:22748058-22748244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
55-266
               

               
Cow position:
               
chr27:4398751-4398544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
55-273
               

               
Cow position:
               
chr27:10581269-10581483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
55-299
               

               
Cow position:
               
chr27:10404383-10404136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
55-312
               

               
Cow position:
               
chr27:31169372-31169117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr27:20485780-20486065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
55-382
               

               
Cow position:
               
chr27:27405333-27405005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
55-520
               

               
Cow position:
               
chr27:13875464-13875930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
55-525
               

               
Cow position:
               
chr27:20869946-20869497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
55-529
               

               
Cow position:
               
chr27:26434077-26433605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
55-534
               

               
Cow position:
               
chr27:22220283-22220766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 340
               

               
Conread position:
               
55-535
               

               
Cow position:
               
chr27:18507380-18507845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
55-535
               

               
Cow position:
               
chr27:22035636-22035160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
55-535
               

               
Cow position:
               
chr27:26509421-26508948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr27:22583481-22583667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
56-311
               

               
Cow position:
               
chr27:24303675-24303936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
56-330
               

               
Cow position:
               
chr27:26437381-26437108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
56-379
               

               
Cow position:
               
chr27:20514563-20514882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
57-246
               

               
Cow position:
               
chr27:31183308-31183503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
57-272
               

               
Cow position:
               
chr27:11133824-11134039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
57-334
               

               
Cow position:
               
chr27:17933661-17933942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
57-455
               

               
Cow position:
               
chr27:19500498-19500095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
58-408
               

               
Cow position:
               
chr27:15865345-15865696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
60-529
               

               
Cow position:
               
chr27:27856080-27856539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
61-457
               

               
Cow position:
               
chr27:30872314-30871920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
61-479
               

               
Cow position:
               
chr27:19896507-19896913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
62-285
               

               
Cow position:
               
chr27:3518246-3518471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
62-332
               

               
Cow position:
               
chr27:11982907-11982636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
62-338
               

               
Cow position:
               
chr27:31210292-31210566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
62-424
               

               
Cow position:
               
chr27:23594064-23594422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
62-430
               

               
Cow position:
               
chr27:26226546-26226178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
62-432
               

               
Cow position:
               
chr27:29185101-29184725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
62-530
               

               
Cow position:
               
chr27:16284232-16284680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
62-530
               

               
Cow position:
               
chr27:27632853-27632401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
62-533
               

               
Cow position:
               
chr27:17397709-17397238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
62-535
               

               
Cow position:
               
chr27:10582115-10582576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
62-535
               

               
Cow position:
               
chr27:20828962-20828494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 79
               

               
Conread position:
               
62-535
               

               
Cow position:
               
chr27:27020353-27019887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
62-535
               

               
Cow position:
               
chr27:30890043-30890500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr27:19576580-19576363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
63-376
               

               
Cow position:
               
chr27:24240094-24240404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr27:29431220-29431620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
64-267
               

               
Cow position:
               
chr27:11323071-11323278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
64-332
               

               
Cow position:
               
chr27:19508756-19509027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
64-338
               

               
Cow position:
               
chr27:236996-237288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
47, 171
               

               
Conread position:
               
64-535
               

               
Cow position:
               
chr27:10307559-10307082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
65-318
               

               
Cow position:
               
chr27:29614789-29615046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
65-329
               

               
Cow position:
               
chr27:31004687-31004951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
65-366
               

               
Cow position:
               
chr27:20628803-20629108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 233
               

               
Conread position:
               
65-534
               

               
Cow position:
               
chr27:31231334-31230882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
65-535
               

               
Cow position:
               
chr27:14670635-14670169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
65-535
               

               
Cow position:
               
chr27:18543734-18544211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr27:28478333-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr27:26617160-26617414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
66-494
               

               
Cow position:
               
chr27:28496624-28496203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
66-530
               

               
Cow position:
               
chr27:19387764-19388227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
66-533
               

               
Cow position:
               
chr27:7851135-7851583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
66-533
               

               
Cow position:
               
chr27:15925090-15925546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
67-240
               

               
Cow position:
               
chr27:11528676-11528852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr27:24223703-24223922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
67-304
               

               
Cow position:
               
chr27:10598734-10598974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
67-363
               

               
Cow position:
               
chr27:23484962-23485258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
67-487
               

               
Cow position:
               
chr27:7212984-7212548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 328
               

               
Conread position:
               
67-504
               

               
Cow position:
               
chr27:6787699-6788140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
67-521
               

               
Cow position:
               
chr27:18031321-18030860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
67-533
               

               
Cow position:
               
chr27:6541384-6541836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
68-343
               

               
Cow position:
               
chr27:12709990-12710265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
68-355
               

               
Cow position:
               
chr27:12425037-12425325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
68-494
               

               
Cow position:
               
chr27:15409277-15408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
69-457
               

               
Cow position:
               
chr27:7346419-7346800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
69-535
               

               
Cow position:
               
chr27:16786583-16787040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
71-413
               

               
Cow position:
               
chr27:23510726-23511085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
71-529
               

               
Cow position:
               
chr27:29494147-29493710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
71-535
               

               
Cow position:
               
chr27:23918283-23917844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
72-514
               

               
Cow position:
               
chr27:19589235-19589670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
72-530
               

               
Cow position:
               
chr27:15669022-15668559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
73-229
               

               
Cow position:
               
chr27:28062441-28062288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
73-251
               

               
Cow position:
               
chr27:27606541-27606364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr27:27529061-27528876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
73-396
               

               
Cow position:
               
chr27:24440464-24440150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
73-400
               

               
Cow position:
               
chr27:15378729-15378396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
73-411
               

               
Cow position:
               
chr27:591018-590671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 233
               

               
Conread position:
               
73-456
               

               
Cow position:
               
chr27:426723-427111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
74-305
               

               
Cow position:
               
chr27:6106461-6106684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
141, 77
               

               
Conread position:
               
74-514
               

               
Cow position:
               
chr27:16705007-16705438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
74-524
               

               
Cow position:
               
chr27:21669353-21668923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
74-535
               

               
Cow position:
               
chr27:7412148-7412596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
74-535
               

               
Cow position:
               
chr27:26643457-26643886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
74-535
               

               
Cow position:
               
chr27:27389273-27388815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 307
               

               
Conread position:
               
75-355
               

               
Cow position:
               
chr27:20719040-20719328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
75-363
               

               
Cow position:
               
chr27:26852827-26852547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
75-429
               

               
Cow position:
               
chr27:11151427-11151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
75-472
               

               
Cow position:
               
chr27:22513926-22513525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
75-530
               

               
Cow position:
               
chr27:15870914-15871370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
75-535
               

               
Cow position:
               
chr27:10979615-10980077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 248
               

               
Conread position:
               
79-281
               

               
Cow position:
               
chr27:17102659-17102858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
79-535
               

               
Cow position:
               
chr27:15204477-15204018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
81-318
               

               
Cow position:
               
chr27:23994654-23994421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
81-402
               

               
Cow position:
               
chr27:18646388-18646061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
81-534
               

               
Cow position:
               
chr27:299613-299171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
82-303
               

               
Cow position:
               
chr27:15003217-15002994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
83-305
               

               
Cow position:
               
chr27:6319685-6319905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
85-283
               

               
Cow position:
               
chr27:24693183-24693377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
85-478
               

               
Cow position:
               
chr27:20517417-20517816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 111
               

               
Conread position:
               
85-533
               

               
Cow position:
               
chr27:26865343-26864908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
87-535
               

               
Cow position:
               
chr27:6499825-6500278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
88-533
               

               
Cow position:
               
chr27:22550002-22549571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
89-430
               

               
Cow position:
               
chr27:20637289-20636957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
89-441
               

               
Cow position:
               
chr27:26490136-26489782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
89-519
               

               
Cow position:
               
chr27:23554560-23554122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
89-533
               

               
Cow position:
               
chr27:435001-435447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chr27:26504075-26504251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
91-365
               

               
Cow position:
               
chr27:23108131-23107854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
91-428
               

               
Cow position:
               
chr27:27695004-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 152
               

               
Conread position:
               
91-512
               

               
Cow position:
               
chr27:18739145-18739577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
91-527
               

               
Cow position:
               
chr27:19685939-19685509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
93-457
               

               
Cow position:
               
chr27:23890706-23891077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 210
               

               
Conread position:
               
94-535
               

               
Cow position:
               
chr27:26238798-26239237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
104-377
               

               
Cow position:
               
chr27:1190689-1190416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
104-530
               

               
Cow position:
               
chr27:29977035-29977466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
112-416
               

               
Cow position:
               
chr27:20481561-20481279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
118-436
               

               
Cow position:
               
chr27:26506544-26506838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr27:20758216-20757920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
284, 69
               

               
Conread position:
               
136-461
               

               
Cow position:
               
chr27:28271334-28271003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
81, 162
               

               
Conread position:
               
141-286
               

               
Cow position:
               
chr27:11466644-11466498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
143-333
               

               
Cow position:
               
chr27:22348313-22348500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
155-535
               

               
Cow position:
               
chr27:20795628-20795997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr27:23942984-23943154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chr27:29504812-29504543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 230
               

               
Conread position:
               
160-535
               

               
Cow position:
               
chr27:23882525-23882161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
166-533
               

               
Cow position:
               
chr27:24014893-24014530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 169
               

               
Conread position:
               
167-379
               

               
Cow position:
               
chr27:6302620-6302398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
167-381
               

               
Cow position:
               
chr27:31017978-31017771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr27:25721102-25720872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
167-445
               

               
Cow position:
               
chr27:16589855-16589589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
167-530
               

               
Cow position:
               
chr27:4819866-4819504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 212
               

               
Conread position:
               
167-530
               

               
Cow position:
               
chr27:25411662-25411311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 75
               

               
Conread position:
               
167-535
               

               
Cow position:
               
chr27:4672859-4673234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 270
               

               
Conread position:
               
167-535
               

               
Cow position:
               
chr27:23483074-23483436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
168-533
               

               
Cow position:
               
chr27:1122880-1123232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
168-535
               

               
Cow position:
               
chr27:4835759-4835394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 178
               

               
Conread position:
               
168-535
               

               
Cow position:
               
chr27:26441199-26440845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
168-535
               

               
Cow position:
               
chr27:27050059-27049699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
169-308
               

               
Cow position:
               
chr27:30489561-30489421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
169-412
               

               
Cow position:
               
chr27:20092985-20092744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 181
               

               
Conread position:
               
169-445
               

               
Cow position:
               
chr27:29312825-29312546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 225
               

               
Conread position:
               
169-447
               

               
Cow position:
               
chr27:31148611-31148890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
169-535
               

               
Cow position:
               
chr27:24321039-24321401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
170-535
               

               
Cow position:
               
chr27:30354494-30354132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 288
               

               
Conread position:
               
171-430
               

               
Cow position:
               
chr27:24371094-24371347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
171-432
               

               
Cow position:
               
chr27:21213639-21213885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
171-530
               

               
Cow position:
               
chr27:20641482-20641138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
172-535
               

               
Cow position:
               
chr27:20553584-20553930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
177-304
               

               
Cow position:
               
chr27:788940-788812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
177-457
               

               
Cow position:
               
chr27:22423373-22423634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
184-535
               

               
Cow position:
               
chr27:4813019-4812664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 268
               

               
Conread position:
               
190-380
               

               
Cow position:
               
chr27:8405952-8405763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
190-432
               

               
Cow position:
               
chr27:16625770-16626010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
190-497
               

               
Cow position:
               
chr27:6159851-6160156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
203-533
               

               
Cow position:
               
chr27:23472142-23472469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
207-502
               

               
Cow position:
               
chr27:3784-4067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
207-527
               

               
Cow position:
               
chr27:4829924-4829603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
210-434
               

               
Cow position:
               
chr27:30389407-30389180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 191
               

               
Conread position:
               
213-457
               

               
Cow position:
               
chr27:20789485-20789240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 227
               

               
Conread position:
               
218-378
               

               
Cow position:
               
chr27:24306728-24306888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
218-535
               

               
Cow position:
               
chr27:21351122-21350802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
223-426
               

               
Cow position:
               
chr27:13274251-13274046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 90
               
Show alignments to all cow chromosomes.