Cow genome map
| Conread name: | rdbla0119_m12.y1 |
| Conread position: | 16-535 |
| Cow position: | chr5:30276970-30276464 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 18-525 |
| Cow position: | chr5:40152770-40152254 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 21-245 |
| Cow position: | chr5:21721194-21721414 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 194, 29 |
| Conread position: | 32-509 |
| Cow position: | chr5:50942886-50943359 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 42-382 |
| Cow position: | chr5:63241239-63240893 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 43-482 |
| Cow position: | chr5:44028053-44028479 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 45-245 |
| Cow position: | chr5:20345794-20345593 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 45-288 |
| Cow position: | chr5:2240731-2240976 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 66, 217 |
| Conread position: | 45-535 |
| Cow position: | chr5:64139814-64139332 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 46-525 |
| Cow position: | chr5:65753117-65752635 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 47-256 |
| Cow position: | chr5:6876712-6876923 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 47-535 |
| Cow position: | chr5:55966617-55967114 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 269 |
| Conread position: | 51-268 |
| Cow position: | chr5:15991392-15991606 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 51-285 |
| Cow position: | chr5:26167671-26167437 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 51-514 |
| Cow position: | chr5:35969791-35969333 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 52-274 |
| Cow position: | chr5:49821681-49821455 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 52-343 |
| Cow position: | chr5:49341784-49342090 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 54, 296 |
| Conread position: | 52-533 |
| Cow position: | chr5:42845350-42845829 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 129, 28 |
| Conread position: | 53-449 |
| Cow position: | chr5:19335529-19335939 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 54-240 |
| Cow position: | chr5:66287190-66287006 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 54-290 |
| Cow position: | chr5:17828229-17828468 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 54-456 |
| Cow position: | chr5:30092381-30092782 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 154, 27 |
| Conread position: | 54-514 |
| Cow position: | chr5:48154216-48154682 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 54-534 |
| Cow position: | chr5:57074088-57074565 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 55-232 |
| Cow position: | chr5:32976007-32975827 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 55-289 |
| Cow position: | chr5:52136806-52137042 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 55-305 |
| Cow position: | chr5:60514778-60515031 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 55-309 |
| Cow position: | chr5:56549617-56549356 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 55-359 |
| Cow position: | chr5:63627294-63627584 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 291, 26 |
| Conread position: | 55-372 |
| Cow position: | chr5:6438779-6439105 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 55-460 |
| Cow position: | chr5:35246862-35247271 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 55-515 |
| Cow position: | chr5:11426988-11427452 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 106 |
| Conread position: | 55-534 |
| Cow position: | chr5:36868983-36868515 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 56-277 |
| Cow position: | chr5:35190351-35190134 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 56-441 |
| Cow position: | chr5:64026764-64027149 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 56-460 |
| Cow position: | chr5:66582218-66581803 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 140 |
| Conread position: | 56-530 |
| Cow position: | chr5:16893532-16894002 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 56-535 |
| Cow position: | chr5:35826846-35826359 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 56-535 |
| Cow position: | chr5:38833361-38832886 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 85 |
| Conread position: | 57-304 |
| Cow position: | chr5:33273941-33273693 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 57-310 |
| Cow position: | chr5:24069658-24069382 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 232 |
| Conread position: | 57-334 |
| Cow position: | chr5:26548896-26549174 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 57-480 |
| Cow position: | chr5:59631731-59631306 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 57-534 |
| Cow position: | chr5:12322567-12323032 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 58-275 |
| Cow position: | chr5:34288009-34288224 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 59-428 |
| Cow position: | chr5:49474310-49474670 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 60-277 |
| Cow position: | chr5:51289359-51289567 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 61-535 |
| Cow position: | chr5:26467868-26467389 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 62-250 |
| Cow position: | chr5:2355760-2355571 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 62-311 |
| Cow position: | chr5:34914815-34915061 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 62-315 |
| Cow position: | chr5:39815260-39815504 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 62-337 |
| Cow position: | chr5:30247284-30247555 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 62-380 |
| Cow position: | chr5:61914809-61914490 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 62-397 |
| Cow position: | chr5:30233148-30232802 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 62-434 |
| Cow position: | chr5:991714-991332 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 62-434 |
| Cow position: | chr5:44446632-44447002 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 62-534 |
| Cow position: | chr5:22242533-22243015 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 62-535 |
| Cow position: | chr5:15479370-15478882 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 62-535 |
| Cow position: | chr5:35208504-35208030 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 62-535 |
| Cow position: | chr5:47602048-47601586 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 63-253 |
| Cow position: | chr5:56525468-56525664 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 63-286 |
| Cow position: | chr5:65552481-65552696 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 63-334 |
| Cow position: | chr5:8736037-8736322 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 63-459 |
| Cow position: | chr5:48867504-48867911 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 141 |
| Conread position: | 63-533 |
| Cow position: | chr5:69338053-69337603 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 64-248 |
| Cow position: | chr5:49207090-49207274 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 64-315 |
| Cow position: | chr5:17105084-17104839 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 64-427 |
| Cow position: | chr5:12434774-12434409 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 64-457 |
| Cow position: | chr5:57767747-57768130 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 64-535 |
| Cow position: | chr5:32975320-32975782 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 64-535 |
| Cow position: | chr5:66972668-66972171 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 65-251 |
| Cow position: | chr5:29895409-29895221 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 65-286 |
| Cow position: | chr5:26147827-26147606 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 65-413 |
| Cow position: | chr5:42670635-42670969 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 65-461 |
| Cow position: | chr5:56014962-56014573 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 65-525 |
| Cow position: | chr5:43858180-43858649 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 65-530 |
| Cow position: | chr5:21829102-21828638 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 76 |
| Conread position: | 65-533 |
| Cow position: | chr5:63647239-63647696 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 65-535 |
| Cow position: | chr5:24995981-24996455 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 65-535 |
| Cow position: | chr5:47316737-47317199 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 66-319 |
| Cow position: | chr5:74039769-74040019 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 66-431 |
| Cow position: | chr5:33560499-33560865 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 66-445 |
| Cow position: | chr5:42050781-42050406 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 85 |
| Conread position: | 66-449 |
| Cow position: | chr5:65967503-65967877 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 67-245 |
| Cow position: | chr5:3677965-3677775 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 67-379 |
| Cow position: | chr5:19752537-19752226 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 67-402 |
| Cow position: | chr5:12557051-12557394 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 38, 101 |
| Conread position: | 67-497 |
| Cow position: | chr5:30178268-30178703 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 294 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 67-533 |
| Cow position: | chr5:55942142-55942627 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 68-252 |
| Cow position: | chr5:70591777-70591603 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 145, 41 |
| Conread position: | 68-308 |
| Cow position: | chr5:50824819-50824585 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 68-353 |
| Cow position: | chr5:20288023-20288314 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 284 |
| Conread position: | 68-445 |
| Cow position: | chr5:46512533-46512908 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 155 |
| Conread position: | 68-525 |
| Cow position: | chr5:66339308-66338863 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 69-433 |
| Cow position: | chr5:22667304-22666960 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 69-445 |
| Cow position: | chr5:49920157-49919785 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 69-495 |
| Cow position: | chr5:5856095-5855689 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 71-277 |
| Cow position: | chr5:37842047-37842255 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 71-390 |
| Cow position: | chr5:34922731-34923040 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 38, 146 |
| Conread position: | 71-493 |
| Cow position: | chr5:7044474-7044899 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 71-530 |
| Cow position: | chr5:19278472-19278918 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 71-530 |
| Cow position: | chr5:45845458-45845921 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 71-530 |
| Cow position: | chr5:52164942-52165408 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 72-288 |
| Cow position: | chr5:51246906-51247118 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 72-534 |
| Cow position: | chr5:62172629-62172188 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 73-254 |
| Cow position: | chr5:61201991-61201806 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 73-280 |
| Cow position: | chr5:18295667-18295460 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 73-312 |
| Cow position: | chr5:69383481-69383246 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 73-313 |
| Cow position: | chr5:39036012-39035770 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 73-325 |
| Cow position: | chr5:29460432-29460186 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 73-337 |
| Cow position: | chr5:22795436-22795178 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 73-364 |
| Cow position: | chr5:59626742-59627038 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 73-412 |
| Cow position: | chr5:71845696-71846036 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 73-440 |
| Cow position: | chr5:57101567-57101916 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 73-450 |
| Cow position: | chr5:7057167-7057550 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 73-457 |
| Cow position: | chr5:3582785-3582415 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 73-486 |
| Cow position: | chr5:34976609-34977021 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 73-514 |
| Cow position: | chr5:26262455-26262883 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 73-529 |
| Cow position: | chr5:5257057-5257522 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 73-530 |
| Cow position: | chr5:35685163-35684708 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 73-533 |
| Cow position: | chr5:66366738-66366302 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 73-535 |
| Cow position: | chr5:9893895-9894358 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 73-535 |
| Cow position: | chr5:17086788-17087261 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 73-535 |
| Cow position: | chr5:20128284-20127823 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 73-535 |
| Cow position: | chr5:21617685-21617224 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 73-535 |
| Cow position: | chr5:28224672-28224224 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 73-535 |
| Cow position: | chr5:65941020-65941484 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 74-233 |
| Cow position: | chr5:4824382-4824216 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 74-382 |
| Cow position: | chr5:70271096-70270783 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 74-454 |
| Cow position: | chr5:55956139-55955755 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 74-533 |
| Cow position: | chr5:64321990-64321519 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 245 |
| Conread position: | 75-370 |
| Cow position: | chr5:52728783-52729086 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 75-535 |
| Cow position: | chr5:37255105-37255587 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 76-290 |
| Cow position: | chr5:60948359-60948144 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 76-415 |
| Cow position: | chr5:12902146-12901800 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 77-535 |
| Cow position: | chr5:5110833-5111308 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 237 |
| Conread position: | 79-277 |
| Cow position: | chr5:44722289-44722488 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 79-289 |
| Cow position: | chr5:46704078-46704287 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 79-295 |
| Cow position: | chr5:60523951-60523739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 80-425 |
| Cow position: | chr5:65764906-65765253 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 80-535 |
| Cow position: | chr5:55756190-55756673 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 81-345 |
| Cow position: | chr5:69099941-69099675 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 81-396 |
| Cow position: | chr5:35228922-35229223 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 81-397 |
| Cow position: | chr5:56548788-56548481 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 81-447 |
| Cow position: | chr5:12760898-12761263 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 81-534 |
| Cow position: | chr5:30253962-30253515 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 81-535 |
| Cow position: | chr5:11229449-11229905 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 81-535 |
| Cow position: | chr5:39447303-39447763 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 255 |
| Conread position: | 81-535 |
| Cow position: | chr5:40109706-40109270 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 82-305 |
| Cow position: | chr5:5017592-5017370 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 82-442 |
| Cow position: | chr5:25035033-25035384 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 160 |
| Conread position: | 82-461 |
| Cow position: | chr5:30628932-30629319 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 83-392 |
| Cow position: | chr5:31475904-31475592 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 85-505 |
| Cow position: | chr5:50600264-50599857 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 85-533 |
| Cow position: | chr5:56071076-56070624 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 85-534 |
| Cow position: | chr5:28302538-28302970 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 24 |
| Conread position: | 87-515 |
| Cow position: | chr5:6503660-6504090 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 88-365 |
| Cow position: | chr5:61007279-61007001 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 88-400 |
| Cow position: | chr5:17554820-17555127 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 88-535 |
| Cow position: | chr5:64523649-64524111 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 89-448 |
| Cow position: | chr5:53947113-53946742 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 89-460 |
| Cow position: | chr5:45397779-45397418 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 89-535 |
| Cow position: | chr5:57328011-57327557 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 90-283 |
| Cow position: | chr5:54312814-54312619 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 90-339 |
| Cow position: | chr5:66466526-66466281 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 90-530 |
| Cow position: | chr5:12351599-12352008 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 94-495 |
| Cow position: | chr5:69461541-69461144 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 74 |
| Conread position: | 99-290 |
| Cow position: | chr5:38169094-38168905 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 101-487 |
| Cow position: | chr5:17767954-17768326 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 104-334 |
| Cow position: | chr5:73253601-73253383 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 104-472 |
| Cow position: | chr5:64697984-64697613 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 137 |
| Conread position: | 104-528 |
| Cow position: | chr5:48829351-48828923 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 104-535 |
| Cow position: | chr5:47703929-47704366 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 86 |
| Conread position: | 104-535 |
| Cow position: | chr5:64137454-64137020 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 104-535 |
| Cow position: | chr5:68872391-68871961 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 86 |
| Conread position: | 109-343 |
| Cow position: | chr5:49501627-49501868 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 200 |
| Conread position: | 109-534 |
| Cow position: | chr5:45170549-45170132 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 114-530 |
| Cow position: | chr5:7193599-7193206 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 116-340 |
| Cow position: | chr5:66531099-66530879 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 196, 27 |
| Conread position: | 116-410 |
| Cow position: | chr5:60183984-60183691 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 120-494 |
| Cow position: | chr5:7755383-7755742 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 127-533 |
| Cow position: | chr5:26093991-26094398 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 133-340 |
| Cow position: | chr5:61102885-61102676 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 85, 135 |
| Conread position: | 133-354 |
| Cow position: | chr5:35982565-35982793 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 133-529 |
| Cow position: | chr5:27306473-27306093 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 137-417 |
| Cow position: | chr5:53710524-53710811 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 140-535 |
| Cow position: | chr5:4709990-4710373 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 103 |
| Conread position: | 140-535 |
| Cow position: | chr5:43457369-43457747 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 75, 110 |
| Conread position: | 140-535 |
| Cow position: | chr5:50533222-50533615 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 141-418 |
| Cow position: | chr5:19524059-19523779 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 142-473 |
| Cow position: | chr5:30949759-30950088 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 143-357 |
| Cow position: | chr5:40242203-40241985 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 143-361 |
| Cow position: | chr5:45419980-45420195 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 143-392 |
| Cow position: | chr5:1087043-1087288 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 146-311 |
| Cow position: | chr5:9233832-9233999 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 149-305 |
| Cow position: | chr5:74974174-74974331 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 149 |
| Conread position: | 154-348 |
| Cow position: | chr5:67118568-67118372 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 157-535 |
| Cow position: | chr5:37814772-37814392 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 229 |
| Conread position: | 158-530 |
| Cow position: | chr5:29903378-29903748 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 158-534 |
| Cow position: | chr5:75436743-75437127 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 158-535 |
| Cow position: | chr5:7723809-7723441 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 162-535 |
| Cow position: | chr5:21039842-21040205 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 163-362 |
| Cow position: | chr5:26150283-26150483 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 167-350 |
| Cow position: | chr5:43408223-43408407 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 167-535 |
| Cow position: | chr5:6045431-6045055 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 295 |
| Conread position: | 168-288 |
| Cow position: | chr5:75228065-75228186 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 168-364 |
| Cow position: | chr5:1461223-1461023 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 168-514 |
| Cow position: | chr5:45804194-45803851 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 168-520 |
| Cow position: | chr5:56467823-56467484 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 182, 13 |
| Conread position: | 168-525 |
| Cow position: | chr5:15721940-15722275 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 168-534 |
| Cow position: | chr5:50821917-50821558 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 168-535 |
| Cow position: | chr5:4166774-4166439 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 169-290 |
| Cow position: | chr5:35647476-35647354 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 169-347 |
| Cow position: | chr5:56517237-56517057 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 169-356 |
| Cow position: | chr5:56338888-56339074 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 169-395 |
| Cow position: | chr5:62378913-62378696 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 169-402 |
| Cow position: | chr5:54375369-54375609 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 169-412 |
| Cow position: | chr5:7698133-7697893 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 40, 132 |
| Conread position: | 169-450 |
| Cow position: | chr5:56877615-56877338 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 169-496 |
| Cow position: | chr5:23168693-23169010 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 205 |
| Conread position: | 169-520 |
| Cow position: | chr5:41545760-41546110 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 171-397 |
| Cow position: | chr5:55019423-55019196 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 127 |
| Conread position: | 171-418 |
| Cow position: | chr5:26476887-26477130 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 102 |
| Conread position: | 171-431 |
| Cow position: | chr5:63426874-63427137 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 171-515 |
| Cow position: | chr5:64758636-64758973 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 44, 143 |
| Conread position: | 171-530 |
| Cow position: | chr5:8820882-8821238 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 171-535 |
| Cow position: | chr5:43992455-43992094 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 171-535 |
| Cow position: | chr5:54350230-54350592 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 172-459 |
| Cow position: | chr5:39875254-39874965 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 172-535 |
| Cow position: | chr5:15598108-15598465 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 174-522 |
| Cow position: | chr5:63964037-63964391 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 177-295 |
| Cow position: | chr5:12169644-12169762 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 177-314 |
| Cow position: | chr5:9170458-9170593 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 177-494 |
| Cow position: | chr5:48009734-48010036 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 181-535 |
| Cow position: | chr5:58793486-58793846 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 184-533 |
| Cow position: | chr5:32696705-32697042 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 218 |
| Conread position: | 185-530 |
| Cow position: | chr5:31640542-31640201 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 190-460 |
| Cow position: | chr5:46425743-46426011 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 196-370 |
| Cow position: | chr5:67212467-67212286 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 197-445 |
| Cow position: | chr5:65883666-65883921 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 209-504 |
| Cow position: | chr5:9390646-9390336 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 110 |
| Conread position: | 210-400 |
| Cow position: | chr5:35126147-35125953 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 210-432 |
| Cow position: | chr5:45273409-45273633 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 6, 88 |
| Conread position: | 210-460 |
| Cow position: | chr5:36255165-36255420 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 162 |
| Conread position: | 210-535 |
| Cow position: | chr5:65601549-65601229 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 212-535 |
| Cow position: | chr5:9089934-9090254 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 85 |
| Conread position: | 216-445 |
| Cow position: | chr5:31144702-31144932 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 218-535 |
| Cow position: | chr5:34638967-34638654 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 91 |
| Conread position: | 222-533 |
| Cow position: | chr5:27155096-27154793 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 77 |
| Conread position: | 223-422 |
| Cow position: | chr5:50799612-50799418 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 223-535 |
| Cow position: | chr5:32140630-32140936 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 227-489 |
| Cow position: | chr5:6670119-6670382 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 79, 69 |
| Conread position: | 238-530 |
| Cow position: | chr5:64823248-64823539 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 114 |
| Conread position: | 245-535 |
| Cow position: | chr5:3627096-3627399 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 251-533 |
| Cow position: | chr5:34916181-34915913 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 252-521 |
| Cow position: | chr5:60126422-60126156 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 154 |
Show alignments to all cow chromosomes.