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Cow genome map

           
Conread name:
           
rdbla0119_n20.y1
        

               
Conread position:
               
19-344
               

               
Cow position:
               
chr17:21807233-21806907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
20-517
               

               
Cow position:
               
chr17:18861142-18860663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
28-517
               

               
Cow position:
               
chr17:21960097-21959630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
205, 32
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr17:35184622-35185038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
207, 29
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr17:29715599-29715140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
195, 25
               

               
Conread position:
               
31-476
               

               
Cow position:
               
chr17:29292786-29292349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
32-517
               

               
Cow position:
               
chr17:28359416-28359900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 27
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr17:9753383-9753709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
279, 26
               

               
Conread position:
               
33-425
               

               
Cow position:
               
chr17:2151781-2152158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
33-442
               

               
Cow position:
               
chr17:14901515-14901917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
33-444
               

               
Cow position:
               
chr17:27667604-27667201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
193, 53
               

               
Conread position:
               
33-445
               

               
Cow position:
               
chr17:16117841-16117429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr17:5380579-5380969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
33-456
               

               
Cow position:
               
chr17:27679665-27679238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
33-482
               

               
Cow position:
               
chr17:15363977-15363538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
33-487
               

               
Cow position:
               
chr17:25755367-25755823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 57
               

               
Conread position:
               
33-508
               

               
Cow position:
               
chr17:41029536-41030000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 29
               

               
Conread position:
               
33-510
               

               
Cow position:
               
chr17:8926645-8926162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
33-512
               

               
Cow position:
               
chr17:3042079-3042530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
440, 26
               

               
Conread position:
               
33-514
               

               
Cow position:
               
chr17:30664865-30665327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
222, 26
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr17:20780109-20780566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:144574-144117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:2006283-2006752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:3471021-3471477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:8690868-8690383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
191, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:11375110-11374639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:11618171-11618646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:13144092-13143630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 28
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:24549759-24550235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:28539630-28540088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr17:32027869-32027395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
34-330
               

               
Cow position:
               
chr17:2270354-2270649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
194, 25
               

               
Conread position:
               
34-455
               

               
Cow position:
               
chr17:32651208-32651618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
190, 25
               

               
Conread position:
               
34-476
               

               
Cow position:
               
chr17:25740534-25740972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
34-513
               

               
Cow position:
               
chr17:32994021-32993570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
200, 13
               

               
Conread position:
               
34-514
               

               
Cow position:
               
chr17:20993451-20992982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 26
               

               
Conread position:
               
34-516
               

               
Cow position:
               
chr17:23803051-23803517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr17:10271075-10271554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr17:27698108-27697639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
35-389
               

               
Cow position:
               
chr17:33370625-33370275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
35-415
               

               
Cow position:
               
chr17:14265961-14265595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
348, 24
               

               
Conread position:
               
35-444
               

               
Cow position:
               
chr17:25167893-25168306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr17:12059500-12059034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
195, 24
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr17:25145720-25145266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
190, 19
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr17:38832646-38833101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 24
               

               
Conread position:
               
36-514
               

               
Cow position:
               
chr17:15334128-15333655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
36-516
               

               
Cow position:
               
chr17:21871143-21870674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
36-517
               

               
Cow position:
               
chr17:9748361-9748805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
37-456
               

               
Cow position:
               
chr17:17453018-17452605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
178, 22
               

               
Conread position:
               
39-464
               

               
Cow position:
               
chr17:20233823-20234236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
39-473
               

               
Cow position:
               
chr17:18494930-18494499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
40-377
               

               
Cow position:
               
chr17:23517569-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
40-511
               

               
Cow position:
               
chr17:30204251-30204714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
47-441
               

               
Cow position:
               
chr17:3499066-3498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
47-516
               

               
Cow position:
               
chr17:26084633-26085087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
59-517
               

               
Cow position:
               
chr17:25590614-25590176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 31
               

               
Conread position:
               
73-513
               

               
Cow position:
               
chr17:32457957-32457511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
84-475
               

               
Cow position:
               
chr17:34628854-34628461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
84-517
               

               
Cow position:
               
chr17:37342842-37342429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
87-516
               

               
Cow position:
               
chr17:242266-242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
92-514
               

               
Cow position:
               
chr17:23880186-23879766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 56
               

               
Conread position:
               
92-516
               

               
Cow position:
               
chr17:9853624-9854041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 170
               

               
Conread position:
               
98-393
               

               
Cow position:
               
chr17:3095477-3095767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
99-459
               

               
Cow position:
               
chr17:7560034-7559667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
99-517
               

               
Cow position:
               
chr17:24580638-24580236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
101-517
               

               
Cow position:
               
chr17:10423710-10424140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
102-513
               

               
Cow position:
               
chr17:28847998-28847607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
104-444
               

               
Cow position:
               
chr17:18592088-18592426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
107-511
               

               
Cow position:
               
chr17:25188936-25189343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 118
               

               
Conread position:
               
113-478
               

               
Cow position:
               
chr17:20022858-20022495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 149
               

               
Conread position:
               
114-342
               

               
Cow position:
               
chr17:2274936-2275168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
120-517
               

               
Cow position:
               
chr17:24883897-24883513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
121-413
               

               
Cow position:
               
chr17:8214575-8214884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 201
               

               
Conread position:
               
121-516
               

               
Cow position:
               
chr17:13922145-13922538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 227
               

               
Conread position:
               
121-517
               

               
Cow position:
               
chr17:24077073-24077461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 139
               

               
Conread position:
               
122-464
               

               
Cow position:
               
chr17:21680436-21680772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
111, 229
               

               
Conread position:
               
122-479
               

               
Cow position:
               
chr17:26182890-26183245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 213
               

               
Conread position:
               
125-512
               

               
Cow position:
               
chr17:16895623-16895254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
98, 182
               

               
Conread position:
               
126-463
               

               
Cow position:
               
chr17:1061388-1061053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
126-517
               

               
Cow position:
               
chr17:25900870-25901258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr17:11304711-11305089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
94, 204
               

               
Conread position:
               
142-455
               

               
Cow position:
               
chr17:9117336-9117645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
149-515
               

               
Cow position:
               
chr17:11171491-11171849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
150-516
               

               
Cow position:
               
chr17:1295875-1295514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 163
               

               
Conread position:
               
150-516
               

               
Cow position:
               
chr17:1783911-1783547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
11, 199
               

               
Conread position:
               
152-514
               

               
Cow position:
               
chr17:25181448-25181088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr17:10634353-10634007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
158-477
               

               
Cow position:
               
chr17:12216367-12216051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
158-509
               

               
Cow position:
               
chr17:38614664-38615010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
168-466
               

               
Cow position:
               
chr17:16448048-16448347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
168-501
               

               
Cow position:
               
chr17:18720730-18720405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
168-517
               

               
Cow position:
               
chr17:25707659-25708018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 193
               

               
Conread position:
               
169-514
               

               
Cow position:
               
chr17:19891332-19891679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
169-515
               

               
Cow position:
               
chr17:41892340-41892005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
303, 56
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr17:42435920-42435588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 172
               

               
Conread position:
               
182-476
               

               
Cow position:
               
chr17:20126349-20126632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
202-435
               

               
Cow position:
               
chr17:37482329-37482094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 207
               

               
Conread position:
               
222-512
               

               
Cow position:
               
chr17:26881561-26881278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
272, 10
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr17:21017583-21017784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
243-478
               

               
Cow position:
               
chr17:35311215-35311445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
243-492
               

               
Cow position:
               
chr17:3945406-3945165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
249-516
               

               
Cow position:
               
chr17:32950072-32950332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
250-456
               

               
Cow position:
               
chr17:35990897-35991097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
252-516
               

               
Cow position:
               
chr17:25999919-26000178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
223, 90
               

               
Conread position:
               
252-517
               

               
Cow position:
               
chr17:34864375-34864633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr17:31481241-31481038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
86, 157
               

               
Conread position:
               
254-455
               

               
Cow position:
               
chr17:18109281-18109087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
255-516
               

               
Cow position:
               
chr17:20215977-20216225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
256-443
               

               
Cow position:
               
chr17:1328164-1327984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
256-449
               

               
Cow position:
               
chr17:20835400-20835589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-450
               

               
Cow position:
               
chr17:10220287-10220469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chr17:37163720-37163526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
256-455
               

               
Cow position:
               
chr17:19756094-19755902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
256-455
               

               
Cow position:
               
chr17:20839753-20839562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
256-455
               

               
Cow position:
               
chr17:21004024-21003830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
256-457
               

               
Cow position:
               
chr17:38276498-38276688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
256-474
               

               
Cow position:
               
chr17:2079567-2079778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
256-477
               

               
Cow position:
               
chr17:27780661-27780874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
200, 80
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr17:11837229-11837446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
204, 90
               

               
Conread position:
               
256-488
               

               
Cow position:
               
chr17:21419239-21419466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 74
               

               
Conread position:
               
256-490
               

               
Cow position:
               
chr17:4721294-4721524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 53
               

               
Conread position:
               
256-495
               

               
Cow position:
               
chr17:37415093-37414857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
210, 90
               

               
Conread position:
               
256-501
               

               
Cow position:
               
chr17:8230425-8230665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
256-508
               

               
Cow position:
               
chr17:27429385-27429628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
210, 90
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr17:21243980-21243733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
236, 90
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr17:33999237-33998997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr17:36533181-36533425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
210, 85
               

               
Conread position:
               
256-514
               

               
Cow position:
               
chr17:7890372-7890127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
256-514
               

               
Cow position:
               
chr17:16307187-16307430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
256-514
               

               
Cow position:
               
chr17:18245882-18246136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
201, 68
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr17:11278225-11277971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:3466642-3466886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
210, 45
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:7132648-7132382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:8279902-8279649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:13989367-13989114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:16371058-16371314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
238, 97
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:18824597-18824849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:23147235-23147477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:23205842-23206082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
209, 85
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:24587425-24587682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
236, 91
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:39012525-39012781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr17:44232913-44232654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
257-451
               

               
Cow position:
               
chr17:36817750-36817936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
257-468
               

               
Cow position:
               
chr17:10446724-10446931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
205, 97
               

               
Conread position:
               
257-481
               

               
Cow position:
               
chr17:27819108-27819328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
257-482
               

               
Cow position:
               
chr17:18884541-18884310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
257-516
               

               
Cow position:
               
chr17:24148983-24149241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
257-517
               

               
Cow position:
               
chr17:9746326-9746574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
213, 72
               

               
Conread position:
               
257-517
               

               
Cow position:
               
chr17:11664783-11664527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
258-438
               

               
Cow position:
               
chr17:32554217-32554043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr17:9293558-9293799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
215, 66
               

               
Conread position:
               
259-495
               

               
Cow position:
               
chr17:8861375-8861144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr17:1526547-1526293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
213, 25
               

               
Conread position:
               
261-517
               

               
Cow position:
               
chr17:908558-908798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
231, 69
               

               
Conread position:
               
261-517
               

               
Cow position:
               
chr17:12536656-12536407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
195, 66
               

               
Conread position:
               
270-464
               

               
Cow position:
               
chr17:10790133-10790323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr17:9697877-9697682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
274-516
               

               
Cow position:
               
chr17:10459111-10458879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
274-517
               

               
Cow position:
               
chr17:12590988-12591227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
217, 72
               

               
Conread position:
               
283-513
               

               
Cow position:
               
chr17:10510828-10510603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
283-517
               

               
Cow position:
               
chr17:13672235-13672014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
212, 21
               

               
Conread position:
               
285-502
               

               
Cow position:
               
chr17:37775957-37776163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
285-517
               

               
Cow position:
               
chr17:37778781-37778561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
292-517
               

               
Cow position:
               
chr17:41811660-41811871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
182, 54
               

               
Conread position:
               
308-513
               

               
Cow position:
               
chr17:4141019-4140829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr17:1094654-1094471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
178, 31
               

               
Conread position:
               
315-517
               

               
Cow position:
               
chr17:7142726-7142919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
315-517
               

               
Cow position:
               
chr17:7614516-7614321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
319-513
               

               
Cow position:
               
chr17:24880614-24880798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
319-516
               

               
Cow position:
               
chr17:6328978-6329172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
319-517
               

               
Cow position:
               
chr17:37138627-37138821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
332-516
               

               
Cow position:
               
chr17:35212245-35212427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
332-517
               

               
Cow position:
               
chr17:26162547-26162365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr17:10308149-10307971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
338-517
               

               
Cow position:
               
chr17:33904034-33903860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
340-517
               

               
Cow position:
               
chr17:21373565-21373736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
352-516
               

               
Cow position:
               
chr17:43961075-43961240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
357-513
               

               
Cow position:
               
chr17:11344119-11344274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
361-512
               

               
Cow position:
               
chr17:5787928-5787780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
361-517
               

               
Cow position:
               
chr17:2180215-2180363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
365-508
               

               
Cow position:
               
chr17:33930091-33930235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
366-498
               

               
Cow position:
               
chr17:20608454-20608588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
366-514
               

               
Cow position:
               
chr17:18815130-18815274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
369-513
               

               
Cow position:
               
chr17:27257318-27257173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
386-513
               

               
Cow position:
               
chr17:4085685-4085812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
396-517
               

               
Cow position:
               
chr17:2270936-2271058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               
Show alignments to all cow chromosomes.