Cow genome map
| Conread name: | rdbla0119_n20.y1 |
| Conread position: | 22-517 |
| Cow position: | chr18:36458434-36458918 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 37 |
| Conread position: | 27-516 |
| Cow position: | chr18:21938861-21939343 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 14 |
| Conread position: | 29-453 |
| Cow position: | chr18:55552481-55552895 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 207, 18 |
| Conread position: | 31-517 |
| Cow position: | chr18:55697514-55697035 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 233 |
| Conread position: | 32-295 |
| Cow position: | chr18:41072376-41072642 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 32-516 |
| Cow position: | chr18:1494806-1495287 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 27 |
| Conread position: | 32-517 |
| Cow position: | chr18:25003366-25002904 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 27 |
| Conread position: | 32-517 |
| Cow position: | chr18:33299425-33299888 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 186, 27 |
| Conread position: | 33-397 |
| Cow position: | chr18:52595913-52596263 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 229, 29 |
| Conread position: | 33-415 |
| Cow position: | chr18:15485086-15484702 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 33-422 |
| Cow position: | chr18:32908414-32908783 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-444 |
| Cow position: | chr18:32860160-32860557 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 27 |
| Conread position: | 33-448 |
| Cow position: | chr18:13173009-13172599 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 33-452 |
| Cow position: | chr18:36907657-36907237 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-456 |
| Cow position: | chr18:17324237-17324642 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 119, 26 |
| Conread position: | 33-456 |
| Cow position: | chr18:43463907-43463482 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 229, 26 |
| Conread position: | 33-463 |
| Cow position: | chr18:33756408-33756809 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 33-472 |
| Cow position: | chr18:32280809-32281225 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 27 |
| Conread position: | 33-473 |
| Cow position: | chr18:14479981-14480413 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 33-476 |
| Cow position: | chr18:22065850-22065407 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 28 |
| Conread position: | 33-478 |
| Cow position: | chr18:37334629-37335052 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 33-495 |
| Cow position: | chr18:22874382-22874842 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 33-514 |
| Cow position: | chr18:17334883-17334435 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 26 |
| Conread position: | 33-514 |
| Cow position: | chr18:21682461-21681991 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 33-514 |
| Cow position: | chr18:37002152-37002613 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 28 |
| Conread position: | 33-516 |
| Cow position: | chr18:11866866-11867320 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 33-516 |
| Cow position: | chr18:16842555-16842075 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 33-516 |
| Cow position: | chr18:36912183-36911703 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-516 |
| Cow position: | chr18:40758729-40759190 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 33-517 |
| Cow position: | chr18:7955664-7956132 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 33-517 |
| Cow position: | chr18:13508226-13507752 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 33-517 |
| Cow position: | chr18:16134799-16134328 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 33-517 |
| Cow position: | chr18:26535990-26535523 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 33-517 |
| Cow position: | chr18:44262132-44262615 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 34-384 |
| Cow position: | chr18:17341802-17342153 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 34-456 |
| Cow position: | chr18:18919420-18919031 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 191, 25 |
| Conread position: | 34-467 |
| Cow position: | chr18:24021909-24022313 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 223, 25 |
| Conread position: | 34-517 |
| Cow position: | chr18:29357120-29356640 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 34-517 |
| Cow position: | chr18:29768426-29768905 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 25 |
| Conread position: | 34-517 |
| Cow position: | chr18:40203277-40202819 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 25 |
| Conread position: | 34-517 |
| Cow position: | chr18:51500572-51500089 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 35-382 |
| Cow position: | chr18:51239761-51240092 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 198, 26 |
| Conread position: | 35-456 |
| Cow position: | chr18:19123691-19124105 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 35-463 |
| Cow position: | chr18:7649511-7649930 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 24 |
| Conread position: | 35-463 |
| Cow position: | chr18:56168398-56167986 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 25 |
| Conread position: | 35-478 |
| Cow position: | chr18:28101145-28101579 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 24 |
| Conread position: | 35-517 |
| Cow position: | chr18:9974806-9974344 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 35-517 |
| Cow position: | chr18:35012786-35012333 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 190, 25 |
| Conread position: | 36-299 |
| Cow position: | chr18:4496660-4496407 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 159, 23 |
| Conread position: | 36-517 |
| Cow position: | chr18:55589954-55589502 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 38-517 |
| Cow position: | chr18:17004776-17005244 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 203, 21 |
| Conread position: | 40-508 |
| Cow position: | chr18:11322112-11322571 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 193, 55 |
| Conread position: | 44-517 |
| Cow position: | chr18:35636819-35636362 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 189, 15 |
| Conread position: | 45-517 |
| Cow position: | chr18:50993746-50993285 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 14 |
| Conread position: | 46-445 |
| Cow position: | chr18:49161926-49161528 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 187, 13 |
| Conread position: | 47-513 |
| Cow position: | chr18:13498086-13497617 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 60-489 |
| Cow position: | chr18:7322270-7322696 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 157, 54 |
| Conread position: | 98-517 |
| Cow position: | chr18:45961688-45961287 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 107-378 |
| Cow position: | chr18:19640379-19640652 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 107-443 |
| Cow position: | chr18:19362698-19362372 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 272, 84 |
| Conread position: | 107-463 |
| Cow position: | chr18:23766840-23766480 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 125, 68 |
| Conread position: | 107-513 |
| Cow position: | chr18:45570608-45570994 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 107-514 |
| Cow position: | chr18:6103522-6103116 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 107-517 |
| Cow position: | chr18:22121300-22120901 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 152 |
| Conread position: | 108-466 |
| Cow position: | chr18:20864567-20864926 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 151 |
| Conread position: | 108-483 |
| Cow position: | chr18:36097798-36098155 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 195, 117 |
| Conread position: | 111-515 |
| Cow position: | chr18:2609151-2608743 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 246 |
| Conread position: | 113-517 |
| Cow position: | chr18:20125892-20126291 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 107 |
| Conread position: | 118-515 |
| Cow position: | chr18:34052387-34052008 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 121-455 |
| Cow position: | chr18:56362006-56361678 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 122-516 |
| Cow position: | chr18:20174535-20174146 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 116, 212 |
| Conread position: | 124-517 |
| Cow position: | chr18:55505003-55505391 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 128-429 |
| Cow position: | chr18:50927336-50927637 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 179 |
| Conread position: | 132-515 |
| Cow position: | chr18:29796828-29796446 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 138-438 |
| Cow position: | chr18:23447467-23447173 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 75, 193 |
| Conread position: | 138-457 |
| Cow position: | chr18:5570771-5571085 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 139-464 |
| Cow position: | chr18:33407234-33407549 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 142-374 |
| Cow position: | chr18:38670490-38670264 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 142-455 |
| Cow position: | chr18:7359357-7359669 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 150-517 |
| Cow position: | chr18:19273493-19273112 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 70, 229 |
| Conread position: | 151-513 |
| Cow position: | chr18:35472313-35471947 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 159 |
| Conread position: | 156-517 |
| Cow position: | chr18:10575741-10576089 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 173 |
| Conread position: | 156-517 |
| Cow position: | chr18:45104818-45104457 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 197 |
| Conread position: | 158-455 |
| Cow position: | chr18:29058861-29058569 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 159-507 |
| Cow position: | chr18:4666576-4666235 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 165-482 |
| Cow position: | chr18:48407428-48407743 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 166-461 |
| Cow position: | chr18:54974351-54974063 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 54, 146 |
| Conread position: | 171-516 |
| Cow position: | chr18:35797265-35797607 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 172 |
| Conread position: | 193-495 |
| Cow position: | chr18:51412055-51412333 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 196-473 |
| Cow position: | chr18:43065181-43065473 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 197-462 |
| Cow position: | chr18:11233101-11233365 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 249-455 |
| Cow position: | chr18:51537933-51537737 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 249-517 |
| Cow position: | chr18:23652888-23652636 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 252-516 |
| Cow position: | chr18:50700397-50700671 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 188, 11 |
| Conread position: | 252-517 |
| Cow position: | chr18:23424659-23424907 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 48, 53 |
| Conread position: | 252-517 |
| Cow position: | chr18:42060809-42061061 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 168, 77 |
| Conread position: | 253-438 |
| Cow position: | chr18:5711936-5711759 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 253-492 |
| Cow position: | chr18:33275039-33275273 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 204, 28 |
| Conread position: | 253-516 |
| Cow position: | chr18:21175913-21176172 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 253-517 |
| Cow position: | chr18:26335085-26334826 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 254-516 |
| Cow position: | chr18:4515759-4516013 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 220, 76 |
| Conread position: | 256-455 |
| Cow position: | chr18:13359796-13359989 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 256-464 |
| Cow position: | chr18:39503951-39503751 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 192, 78 |
| Conread position: | 256-466 |
| Cow position: | chr18:4578735-4578532 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 256-477 |
| Cow position: | chr18:11691678-11691464 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 256-479 |
| Cow position: | chr18:23808139-23807923 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 216, 74 |
| Conread position: | 256-479 |
| Cow position: | chr18:38985421-38985639 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 256-487 |
| Cow position: | chr18:39115410-39115179 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 201, 90 |
| Conread position: | 256-489 |
| Cow position: | chr18:52868929-52869163 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 92 |
| Conread position: | 256-490 |
| Cow position: | chr18:11368029-11367799 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 146, 69 |
| Conread position: | 256-492 |
| Cow position: | chr18:39185343-39185571 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 256-501 |
| Cow position: | chr18:37382364-37382120 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 200, 90 |
| Conread position: | 256-509 |
| Cow position: | chr18:47868189-47868441 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 181, 90 |
| Conread position: | 256-513 |
| Cow position: | chr18:11166713-11166961 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 238, 74 |
| Conread position: | 256-515 |
| Cow position: | chr18:329539-329291 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 206, 48 |
| Conread position: | 256-515 |
| Cow position: | chr18:9806144-9806403 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 158, 90 |
| Conread position: | 256-516 |
| Cow position: | chr18:3044166-3044432 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 256-516 |
| Cow position: | chr18:32773613-32773862 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 256-517 |
| Cow position: | chr18:2592439-2592180 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 227, 79 |
| Conread position: | 256-517 |
| Cow position: | chr18:10101225-10101477 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 256-517 |
| Cow position: | chr18:19387314-19387563 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 256-517 |
| Cow position: | chr18:20127369-20127121 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 168, 73 |
| Conread position: | 256-517 |
| Cow position: | chr18:25970898-25970647 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 215, 76 |
| Conread position: | 256-517 |
| Cow position: | chr18:34325226-34324966 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 129, 90 |
| Conread position: | 256-517 |
| Cow position: | chr18:51298215-51298467 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 257-498 |
| Cow position: | chr18:50566604-50566841 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 215, 89 |
| Conread position: | 257-516 |
| Cow position: | chr18:16726381-16726634 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 73 |
| Conread position: | 257-517 |
| Cow position: | chr18:36477930-36478187 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 216, 90 |
| Conread position: | 258-456 |
| Cow position: | chr18:31562658-31562469 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 258-514 |
| Cow position: | chr18:38344536-38344790 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 214, 28 |
| Conread position: | 258-517 |
| Cow position: | chr18:24946077-24945821 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 260-456 |
| Cow position: | chr18:23360367-23360560 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 261-516 |
| Cow position: | chr18:35582363-35582114 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 193, 84 |
| Conread position: | 262-516 |
| Cow position: | chr18:17670062-17669823 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 263-517 |
| Cow position: | chr18:22411876-22411627 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 193, 69 |
| Conread position: | 266-508 |
| Cow position: | chr18:19363676-19363915 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 274-455 |
| Cow position: | chr18:11183693-11183870 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 284-516 |
| Cow position: | chr18:24856083-24855860 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 286-514 |
| Cow position: | chr18:42479828-42479605 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 206, 60 |
| Conread position: | 294-514 |
| Cow position: | chr18:306292-306082 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 294-516 |
| Cow position: | chr18:23715118-23714900 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 297-456 |
| Cow position: | chr18:41072776-41072929 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 313-514 |
| Cow position: | chr18:32517572-32517367 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 315-517 |
| Cow position: | chr18:3211661-3211862 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 319-508 |
| Cow position: | chr18:36123330-36123518 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 322-517 |
| Cow position: | chr18:56159255-56159446 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 323-515 |
| Cow position: | chr18:219129-219322 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 23 |
| Conread position: | 323-517 |
| Cow position: | chr18:7108922-7109114 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 352-456 |
| Cow position: | chr18:46874081-46873979 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 354-517 |
| Cow position: | chr18:23487851-23488010 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 361-517 |
| Cow position: | chr18:5755814-5755966 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 363-495 |
| Cow position: | chr18:37745639-37745769 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 364-479 |
| Cow position: | chr18:24364211-24364098 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 377-507 |
| Cow position: | chr18:21706331-21706205 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 396-515 |
| Cow position: | chr18:38794017-38793903 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.