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Cow genome map

           
Conread name:
           
rdbla0119_n20.y1
        

               
Conread position:
               
5-499
               

               
Cow position:
               
chr2:818103-818587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 54
               

               
Conread position:
               
10-517
               

               
Cow position:
               
chr2:6697940-6697477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
13-517
               

               
Cow position:
               
chr2:40691011-40691504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 27
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr2:55127685-55127327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
22-517
               

               
Cow position:
               
chr2:25282645-25283133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
235, 37
               

               
Conread position:
               
26-389
               

               
Cow position:
               
chr2:78599576-78599217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
26-508
               

               
Cow position:
               
chr2:81927390-81927863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 33
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr2:1303493-1303966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 33
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr2:14883828-14884230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
29-344
               

               
Cow position:
               
chr2:28611544-28611235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
192, 30
               

               
Conread position:
               
30-455
               

               
Cow position:
               
chr2:11805866-11806281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr2:42191996-42192456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
203, 33
               

               
Conread position:
               
31-517
               

               
Cow position:
               
chr2:34694786-34695263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
32-439
               

               
Cow position:
               
chr2:72527504-72527901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
201, 27
               

               
Conread position:
               
32-517
               

               
Cow position:
               
chr2:24270772-24271246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
196, 54
               

               
Conread position:
               
32-517
               

               
Cow position:
               
chr2:26439176-26438706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
32-517
               

               
Cow position:
               
chr2:29268589-29269086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
32-517
               

               
Cow position:
               
chr2:66217991-66217525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
33-344
               

               
Cow position:
               
chr2:82055585-82055279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr2:43978352-43978019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
33-381
               

               
Cow position:
               
chr2:73279453-73279103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr2:304809-304465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
33-423
               

               
Cow position:
               
chr2:79241905-79241521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
200, 22
               

               
Conread position:
               
33-441
               

               
Cow position:
               
chr2:70708458-70708052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
33-444
               

               
Cow position:
               
chr2:21356308-21355903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
33-444
               

               
Cow position:
               
chr2:55387100-55387496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-451
               

               
Cow position:
               
chr2:1352559-1352161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
200, 22
               

               
Conread position:
               
33-451
               

               
Cow position:
               
chr2:85091486-85091079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr2:48617521-48617940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
33-456
               

               
Cow position:
               
chr2:14215547-14215950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
33-456
               

               
Cow position:
               
chr2:47783924-47784325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
190, 26
               

               
Conread position:
               
33-473
               

               
Cow position:
               
chr2:7193753-7194177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
223, 26
               

               
Conread position:
               
33-474
               

               
Cow position:
               
chr2:47116355-47115941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
33-476
               

               
Cow position:
               
chr2:38659227-38658803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
229, 26
               

               
Conread position:
               
33-500
               

               
Cow position:
               
chr2:76341116-76340649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
33-509
               

               
Cow position:
               
chr2:1365344-1364878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
33-513
               

               
Cow position:
               
chr2:18062095-18061614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
33-513
               

               
Cow position:
               
chr2:27076248-27076724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
33-513
               

               
Cow position:
               
chr2:36008028-36007572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
33-513
               

               
Cow position:
               
chr2:38376431-38376920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
33-514
               

               
Cow position:
               
chr2:31457039-31457504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 26
               

               
Conread position:
               
33-514
               

               
Cow position:
               
chr2:63865777-63865310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 26
               

               
Conread position:
               
33-515
               

               
Cow position:
               
chr2:48749168-48748710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
427, 26
               

               
Conread position:
               
33-515
               

               
Cow position:
               
chr2:69237823-69238295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
191, 26
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr2:21211074-21211563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr2:29612113-29612569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr2:76314300-76313851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
200, 27
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:23493088-23493555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:39855333-39855810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:44191030-44191498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:45913085-45912614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:57508963-57509424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 22
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:62819168-62818688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:64197445-64196972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:70580167-70579685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 27
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:72902721-72902268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 18
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr2:76822719-76822235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
34-455
               

               
Cow position:
               
chr2:46909871-46909480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
34-456
               

               
Cow position:
               
chr2:85067591-85067160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
34-464
               

               
Cow position:
               
chr2:42599455-42599899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
34-496
               

               
Cow position:
               
chr2:60470733-60471180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
34-516
               

               
Cow position:
               
chr2:36867219-36866759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr2:11696683-11697145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 25
               

               
Conread position:
               
35-381
               

               
Cow position:
               
chr2:35135530-35135861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
172, 24
               

               
Conread position:
               
35-438
               

               
Cow position:
               
chr2:29041435-29041824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr2:42226718-42226323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 24
               

               
Conread position:
               
35-460
               

               
Cow position:
               
chr2:41184619-41185018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 21
               

               
Conread position:
               
35-507
               

               
Cow position:
               
chr2:51824492-51824933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
185, 24
               

               
Conread position:
               
35-508
               

               
Cow position:
               
chr2:21644902-21644440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 24
               

               
Conread position:
               
35-513
               

               
Cow position:
               
chr2:62564140-62563674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr2:7534244-7533750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
36-450
               

               
Cow position:
               
chr2:6539684-6539286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
36-486
               

               
Cow position:
               
chr2:778139-777699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
36-511
               

               
Cow position:
               
chr2:11734059-11734531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
36-517
               

               
Cow position:
               
chr2:52170814-52171274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
39-516
               

               
Cow position:
               
chr2:46184718-46184248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
40-517
               

               
Cow position:
               
chr2:70895576-70896052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
41-516
               

               
Cow position:
               
chr2:41896993-41897477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
42-402
               

               
Cow position:
               
chr2:41162558-41162910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
171, 17
               

               
Conread position:
               
42-464
               

               
Cow position:
               
chr2:52386377-52385950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
42-516
               

               
Cow position:
               
chr2:70944958-70945421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
184, 17
               

               
Conread position:
               
46-493
               

               
Cow position:
               
chr2:17341135-17341571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 13
               

               
Conread position:
               
49-438
               

               
Cow position:
               
chr2:28637716-28637343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
51-517
               

               
Cow position:
               
chr2:20900901-20900445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 8
               

               
Conread position:
               
56-510
               

               
Cow position:
               
chr2:27145794-27145356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 106
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr2:4885600-4885319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
58-340
               

               
Cow position:
               
chr2:41176294-41176570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
174, 28
               

               
Conread position:
               
58-415
               

               
Cow position:
               
chr2:31355281-31355627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
161, 28
               

               
Conread position:
               
58-460
               

               
Cow position:
               
chr2:48069824-48069435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr2:79403665-79404068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
58-476
               

               
Cow position:
               
chr2:55255726-55255333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
346, 28
               

               
Conread position:
               
60-423
               

               
Cow position:
               
chr2:40879665-40880016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
165, 26
               

               
Conread position:
               
60-455
               

               
Cow position:
               
chr2:32406243-32406639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
84-517
               

               
Cow position:
               
chr2:38273135-38273568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
84-517
               

               
Cow position:
               
chr2:50445485-50445920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
85-512
               

               
Cow position:
               
chr2:10295693-10296110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
140, 226
               

               
Conread position:
               
92-444
               

               
Cow position:
               
chr2:24709746-24709394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
97-516
               

               
Cow position:
               
chr2:43773975-43773557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 211
               

               
Conread position:
               
97-517
               

               
Cow position:
               
chr2:54789877-54790299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
123, 258
               

               
Conread position:
               
98-455
               

               
Cow position:
               
chr2:21171006-21171340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
130, 109
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr2:36318774-36318418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 136
               

               
Conread position:
               
98-472
               

               
Cow position:
               
chr2:27613415-27613045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
98-517
               

               
Cow position:
               
chr2:69251074-69250647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
135, 208
               

               
Conread position:
               
101-514
               

               
Cow position:
               
chr2:10357062-10356657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 92
               

               
Conread position:
               
101-514
               

               
Cow position:
               
chr2:42255043-42255450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
102-344
               

               
Cow position:
               
chr2:67760178-67759927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 210
               

               
Conread position:
               
102-517
               

               
Cow position:
               
chr2:4070533-4070941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
102-517
               

               
Cow position:
               
chr2:7721288-7720891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr2:70775954-70775646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 245
               

               
Conread position:
               
106-514
               

               
Cow position:
               
chr2:17940673-17940271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
107-438
               

               
Cow position:
               
chr2:46362436-46362769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 127
               

               
Conread position:
               
107-500
               

               
Cow position:
               
chr2:50277635-50278027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
107-517
               

               
Cow position:
               
chr2:53533193-53532794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
107-517
               

               
Cow position:
               
chr2:69748008-69747598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
109-512
               

               
Cow position:
               
chr2:70703874-70704271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
112-475
               

               
Cow position:
               
chr2:78906552-78906905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
328, 108
               

               
Conread position:
               
113-437
               

               
Cow position:
               
chr2:22372324-22372006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
113-517
               

               
Cow position:
               
chr2:56828949-56828550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
112, 149
               

               
Conread position:
               
114-433
               

               
Cow position:
               
chr2:35093059-35092756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
114-455
               

               
Cow position:
               
chr2:46294414-46294080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 99
               

               
Conread position:
               
114-463
               

               
Cow position:
               
chr2:56828247-56827918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
185, 79
               

               
Conread position:
               
114-470
               

               
Cow position:
               
chr2:36997773-36998132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
114-515
               

               
Cow position:
               
chr2:82311568-82311182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 56
               

               
Conread position:
               
114-516
               

               
Cow position:
               
chr2:22119-21718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
112, 193
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr2:38628537-38628865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
115-501
               

               
Cow position:
               
chr2:36076971-36077355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
121-380
               

               
Cow position:
               
chr2:56771474-56771725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
121-489
               

               
Cow position:
               
chr2:52379526-52379185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
122-462
               

               
Cow position:
               
chr2:27600917-27600577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
101, 228
               

               
Conread position:
               
125-515
               

               
Cow position:
               
chr2:70663659-70664033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 84
               

               
Conread position:
               
128-435
               

               
Cow position:
               
chr2:47066946-47066639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
97, 207
               

               
Conread position:
               
129-514
               

               
Cow position:
               
chr2:1918647-1918284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
129-517
               

               
Cow position:
               
chr2:43994569-43994953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
96, 133
               

               
Conread position:
               
131-451
               

               
Cow position:
               
chr2:51638183-51638510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
131-457
               

               
Cow position:
               
chr2:16692795-16693115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
134-517
               

               
Cow position:
               
chr2:53000145-53000532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
135-430
               

               
Cow position:
               
chr2:44065233-44065524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 178
               

               
Conread position:
               
139-496
               

               
Cow position:
               
chr2:56102821-56102464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 207
               

               
Conread position:
               
139-517
               

               
Cow position:
               
chr2:44483000-44482630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
142-456
               

               
Cow position:
               
chr2:39376000-39376305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 93
               

               
Conread position:
               
146-513
               

               
Cow position:
               
chr2:30639842-30640205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
150-514
               

               
Cow position:
               
chr2:21407584-21407938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
152-517
               

               
Cow position:
               
chr2:34256655-34256277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
153-517
               

               
Cow position:
               
chr2:41313559-41313912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
156-456
               

               
Cow position:
               
chr2:22125631-22125328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
162-456
               

               
Cow position:
               
chr2:38965289-38965576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
165-429
               

               
Cow position:
               
chr2:53574780-53575036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
170-517
               

               
Cow position:
               
chr2:32114742-32115098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
170-517
               

               
Cow position:
               
chr2:74209647-74209311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
170-517
               

               
Cow position:
               
chr2:81388367-81388711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
171-517
               

               
Cow position:
               
chr2:74353581-74353917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
213, 53
               

               
Conread position:
               
175-444
               

               
Cow position:
               
chr2:46201953-46202218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
175-517
               

               
Cow position:
               
chr2:13543709-13544042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
178-516
               

               
Cow position:
               
chr2:1211084-1210746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr2:2403-2118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
214-517
               

               
Cow position:
               
chr2:40313095-40313389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
227-501
               

               
Cow position:
               
chr2:78116606-78116342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
230-514
               

               
Cow position:
               
chr2:13604207-13604484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
230-517
               

               
Cow position:
               
chr2:68716932-68716650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
232-516
               

               
Cow position:
               
chr2:72758377-72758646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
239, 24
               

               
Conread position:
               
238-495
               

               
Cow position:
               
chr2:66797134-66796888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
248-517
               

               
Cow position:
               
chr2:34535399-34535139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
250-510
               

               
Cow position:
               
chr2:50400184-50400438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
251-480
               

               
Cow position:
               
chr2:21182926-21183145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
252-462
               

               
Cow position:
               
chr2:66615156-66614947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 94
               

               
Conread position:
               
252-509
               

               
Cow position:
               
chr2:15653545-15653303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
252-517
               

               
Cow position:
               
chr2:73353553-73353814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
253-442
               

               
Cow position:
               
chr2:1203445-1203631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
183, 89
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr2:17967269-17967071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
253-506
               

               
Cow position:
               
chr2:46359284-46359029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
253-513
               

               
Cow position:
               
chr2:14465786-14465544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
245, 27
               

               
Conread position:
               
253-516
               

               
Cow position:
               
chr2:69770267-69770522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
211, 77
               

               
Conread position:
               
254-421
               

               
Cow position:
               
chr2:27987770-27987936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
254-462
               

               
Cow position:
               
chr2:11900195-11900395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
254-494
               

               
Cow position:
               
chr2:32498862-32498637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr2:70601762-70602017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
254-517
               

               
Cow position:
               
chr2:46330821-46331081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
202, 92
               

               
Conread position:
               
255-516
               

               
Cow position:
               
chr2:14749360-14749611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
255-517
               

               
Cow position:
               
chr2:16428635-16428378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
207, 99
               

               
Conread position:
               
256-415
               

               
Cow position:
               
chr2:6720623-6720778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
256-433
               

               
Cow position:
               
chr2:40836396-40836223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-439
               

               
Cow position:
               
chr2:46244259-46244077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
256-441
               

               
Cow position:
               
chr2:39584217-39584397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-455
               

               
Cow position:
               
chr2:42927684-42927489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-455
               

               
Cow position:
               
chr2:50580135-50580332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
256-455
               

               
Cow position:
               
chr2:53430493-53430686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
256-456
               

               
Cow position:
               
chr2:50606316-50606506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
256-462
               

               
Cow position:
               
chr2:36435968-36436170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-470
               

               
Cow position:
               
chr2:15769722-15769518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
256-488
               

               
Cow position:
               
chr2:52777047-52777267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
256-493
               

               
Cow position:
               
chr2:42925070-42925294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
256-496
               

               
Cow position:
               
chr2:42643328-42643096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
256-501
               

               
Cow position:
               
chr2:73069484-73069729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr2:40492136-40492377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
202, 70
               

               
Conread position:
               
256-506
               

               
Cow position:
               
chr2:57939449-57939688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-507
               

               
Cow position:
               
chr2:81349118-81348875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-509
               

               
Cow position:
               
chr2:25283577-25283824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
233, 90
               

               
Conread position:
               
256-509
               

               
Cow position:
               
chr2:45311360-45311107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
189, 90
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr2:18636660-18636910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr2:54890089-54890334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
224, 73
               

               
Conread position:
               
256-514
               

               
Cow position:
               
chr2:18621173-18621425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
214, 86
               

               
Conread position:
               
256-515
               

               
Cow position:
               
chr2:43835797-43835544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
216, 90
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr2:70539609-70539355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr2:80963878-80963629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:793414-793665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:11616866-11617113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:13354442-13354694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
236, 44
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:14555984-14555730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:22859872-22859621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
217, 84
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:26042472-26042222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:26501173-26500915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:29382906-29382661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:31155483-31155730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
202, 73
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:36878451-36878200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
242, 90
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:38118223-38117980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 87
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:42309787-42309533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
216, 45
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:46741243-46741502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
146, 90
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:51594532-51594783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
234, 93
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:53851199-53851455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
236, 90
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:68843182-68842921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr2:70752558-70752818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
257-413
               

               
Cow position:
               
chr2:23640254-23640408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
257-452
               

               
Cow position:
               
chr2:69046805-69046991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
257-464
               

               
Cow position:
               
chr2:46033099-46033299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
257-471
               

               
Cow position:
               
chr2:47138605-47138817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
191, 75
               

               
Conread position:
               
257-513
               

               
Cow position:
               
chr2:68359783-68360025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
257-516
               

               
Cow position:
               
chr2:6055735-6055985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
258-511
               

               
Cow position:
               
chr2:33659933-33659690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
258-513
               

               
Cow position:
               
chr2:71495157-71495409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr2:23014706-23014463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
157, 25
               

               
Conread position:
               
258-516
               

               
Cow position:
               
chr2:43718684-43718919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr2:80190-79940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
198, 22
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr2:84480751-84480483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
259-464
               

               
Cow position:
               
chr2:72583674-72583872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
261-455
               

               
Cow position:
               
chr2:46194567-46194754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
261-517
               

               
Cow position:
               
chr2:48361339-48361590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 85
               

               
Conread position:
               
265-513
               

               
Cow position:
               
chr2:18250120-18249877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
265-514
               

               
Cow position:
               
chr2:66780079-66779843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
181, 27
               

               
Conread position:
               
265-517
               

               
Cow position:
               
chr2:1651179-1651422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
271-517
               

               
Cow position:
               
chr2:72688217-72687977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
275-456
               

               
Cow position:
               
chr2:80868868-80869047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
275-494
               

               
Cow position:
               
chr2:64226219-64226434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
283-452
               

               
Cow position:
               
chr2:29288824-29288991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
283-509
               

               
Cow position:
               
chr2:16564477-16564696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
283-517
               

               
Cow position:
               
chr2:2382769-2382536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
284-515
               

               
Cow position:
               
chr2:64972865-64973089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
292-517
               

               
Cow position:
               
chr2:9324796-9325017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
295-517
               

               
Cow position:
               
chr2:61820984-61820771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
299-517
               

               
Cow position:
               
chr2:80595502-80595292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 5
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr2:6443848-6444042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
315-456
               

               
Cow position:
               
chr2:39533920-39534059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
315-461
               

               
Cow position:
               
chr2:39471958-39472097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
315-470
               

               
Cow position:
               
chr2:17346893-17347041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
315-477
               

               
Cow position:
               
chr2:63488808-63488969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr2:70790928-70790735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
318-517
               

               
Cow position:
               
chr2:46175430-46175242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
322-456
               

               
Cow position:
               
chr2:19154132-19154267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
323-509
               

               
Cow position:
               
chr2:58685208-58685396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
324-492
               

               
Cow position:
               
chr2:18889554-18889388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
152, 22
               

               
Conread position:
               
325-470
               

               
Cow position:
               
chr2:70305994-70306134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
328-517
               

               
Cow position:
               
chr2:425650-425833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
332-517
               

               
Cow position:
               
chr2:2740304-2740480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
333-512
               

               
Cow position:
               
chr2:7498422-7498592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr2:62644430-62644605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
342-517
               

               
Cow position:
               
chr2:62309580-62309407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
343-489
               

               
Cow position:
               
chr2:63657935-63658079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
343-517
               

               
Cow position:
               
chr2:20916138-20915971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
346-514
               

               
Cow position:
               
chr2:82054992-82054828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
352-515
               

               
Cow position:
               
chr2:944861-945018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
352-517
               

               
Cow position:
               
chr2:45726045-45726203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
354-514
               

               
Cow position:
               
chr2:61950382-61950533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
358-517
               

               
Cow position:
               
chr2:50793605-50793764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
361-517
               

               
Cow position:
               
chr2:59380618-59380464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
367-514
               

               
Cow position:
               
chr2:17427005-17427153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
376-517
               

               
Cow position:
               
chr2:20250585-20250729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.