Cow genome map
| Conread name: | rdbla0119_n20.y1 |
| Conread position: | 1-517 |
| Cow position: | chr21:5596734-5597233 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 8-517 |
| Cow position: | chr21:42500625-42501125 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 225, 33 |
| Conread position: | 15-517 |
| Cow position: | chr21:28881744-28882219 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 332 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 366, 44 |
| Conread position: | 17-427 |
| Cow position: | chr21:16789316-16789721 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 18-495 |
| Cow position: | chr21:8290045-8289571 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 41 |
| Conread position: | 23-455 |
| Cow position: | chr21:18494583-18494990 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 25-516 |
| Cow position: | chr21:19766460-19766934 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 208, 16 |
| Conread position: | 30-455 |
| Cow position: | chr21:34738210-34738631 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 196, 16 |
| Conread position: | 30-510 |
| Cow position: | chr21:24864758-24865235 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 31-463 |
| Cow position: | chr21:26829624-26829229 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 31-516 |
| Cow position: | chr21:17174757-17175227 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 231, 55 |
| Conread position: | 33-307 |
| Cow position: | chr21:8274572-8274308 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 182, 26 |
| Conread position: | 33-393 |
| Cow position: | chr21:17219006-17218653 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 221, 22 |
| Conread position: | 33-400 |
| Cow position: | chr21:5153230-5153584 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-422 |
| Cow position: | chr21:44219842-44220207 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 33-423 |
| Cow position: | chr21:44331678-44331284 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 33-438 |
| Cow position: | chr21:363266-363654 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 193, 26 |
| Conread position: | 33-453 |
| Cow position: | chr21:28512154-28512548 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-455 |
| Cow position: | chr21:21216528-21216122 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 33-455 |
| Cow position: | chr21:48484827-48484426 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 225, 26 |
| Conread position: | 33-461 |
| Cow position: | chr21:33209812-33210229 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 26 |
| Conread position: | 33-472 |
| Cow position: | chr21:30250592-30250159 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-490 |
| Cow position: | chr21:22855835-22856274 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 346, 22 |
| Conread position: | 33-490 |
| Cow position: | chr21:40244047-40244497 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 33-510 |
| Cow position: | chr21:15742490-15742015 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 33-513 |
| Cow position: | chr21:29942609-29943081 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 26 |
| Conread position: | 33-513 |
| Cow position: | chr21:34391353-34390898 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 26 |
| Conread position: | 33-513 |
| Cow position: | chr21:37942077-37941608 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 33-513 |
| Cow position: | chr21:38900397-38900851 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 200, 16 |
| Conread position: | 33-514 |
| Cow position: | chr21:47823659-47823195 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 27 |
| Conread position: | 33-516 |
| Cow position: | chr21:27743354-27743829 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 188, 26 |
| Conread position: | 33-517 |
| Cow position: | chr21:725275-724803 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 26 |
| Conread position: | 33-517 |
| Cow position: | chr21:20262721-20262254 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 33-517 |
| Cow position: | chr21:23801498-23801047 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 159, 21 |
| Conread position: | 33-517 |
| Cow position: | chr21:27230178-27229710 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 191, 26 |
| Conread position: | 33-517 |
| Cow position: | chr21:31576121-31576577 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 34-508 |
| Cow position: | chr21:22719160-22718709 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 187, 25 |
| Conread position: | 34-515 |
| Cow position: | chr21:18289278-18289742 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 199, 25 |
| Conread position: | 34-516 |
| Cow position: | chr21:5898796-5898321 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 34-517 |
| Cow position: | chr21:10514426-10514887 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 319 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 187, 21 |
| Conread position: | 35-453 |
| Cow position: | chr21:393637-394038 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 24 |
| Conread position: | 35-491 |
| Cow position: | chr21:4276987-4276540 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 328 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 35-498 |
| Cow position: | chr21:20925890-20925441 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 191, 24 |
| Conread position: | 35-508 |
| Cow position: | chr21:39401209-39401667 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 315 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 35-517 |
| Cow position: | chr21:3236144-3236607 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 21 |
| Conread position: | 35-517 |
| Cow position: | chr21:13089857-13089387 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 190, 45 |
| Conread position: | 35-517 |
| Cow position: | chr21:33997610-33997146 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 190, 24 |
| Conread position: | 36-339 |
| Cow position: | chr21:36982652-36982961 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 41-516 |
| Cow position: | chr21:36163341-36162879 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 185, 18 |
| Conread position: | 41-517 |
| Cow position: | chr21:23192897-23192431 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 182, 18 |
| Conread position: | 45-514 |
| Cow position: | chr21:32574348-32574799 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 47-478 |
| Cow position: | chr21:4794848-4795270 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 289 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 148, 12 |
| Conread position: | 58-517 |
| Cow position: | chr21:9415880-9416331 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 26 |
| Conread position: | 58-517 |
| Cow position: | chr21:19363813-19363378 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 398, 26 |
| Conread position: | 58-517 |
| Cow position: | chr21:23785653-23786113 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 62-456 |
| Cow position: | chr21:21411777-21411370 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 128, 24 |
| Conread position: | 88-453 |
| Cow position: | chr21:41974720-41974356 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 135, 24 |
| Conread position: | 89-501 |
| Cow position: | chr21:23449238-23449640 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 91-475 |
| Cow position: | chr21:20160340-20160719 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 247 |
| Conread position: | 97-511 |
| Cow position: | chr21:28998251-28997823 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 176 |
| Conread position: | 98-517 |
| Cow position: | chr21:28993959-28993535 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 164 |
| Conread position: | 101-383 |
| Cow position: | chr21:31278450-31278729 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 160 |
| Conread position: | 102-517 |
| Cow position: | chr21:4399472-4399884 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 12 |
| Conread position: | 104-477 |
| Cow position: | chr21:23821843-23822210 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 10 |
| Conread position: | 106-517 |
| Cow position: | chr21:4098560-4098954 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 107-455 |
| Cow position: | chr21:29069652-29069308 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 227 |
| Conread position: | 107-479 |
| Cow position: | chr21:12973575-12973201 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 107-513 |
| Cow position: | chr21:16612305-16612702 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 198 |
| Conread position: | 107-517 |
| Cow position: | chr21:641263-641668 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 126, 45 |
| Conread position: | 107-517 |
| Cow position: | chr21:28210861-28211276 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 126, 209 |
| Conread position: | 107-517 |
| Cow position: | chr21:30232023-30231613 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 113-517 |
| Cow position: | chr21:6833734-6834130 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 112, 192 |
| Conread position: | 114-517 |
| Cow position: | chr21:46849436-46849046 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 109, 144 |
| Conread position: | 118-517 |
| Cow position: | chr21:27341904-27341510 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 120-444 |
| Cow position: | chr21:4189521-4189846 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 217 |
| Conread position: | 120-509 |
| Cow position: | chr21:5344350-5344733 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 124 |
| Conread position: | 122-517 |
| Cow position: | chr21:11740439-11740038 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 128-389 |
| Cow position: | chr21:18712983-18713239 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 97, 131 |
| Conread position: | 129-513 |
| Cow position: | chr21:23500123-23499747 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 136, 208 |
| Conread position: | 135-455 |
| Cow position: | chr21:32237004-32237316 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 139-512 |
| Cow position: | chr21:28734204-28733836 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 86, 123 |
| Conread position: | 143-442 |
| Cow position: | chr21:21919561-21919849 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 143-517 |
| Cow position: | chr21:44755065-44754697 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 149-517 |
| Cow position: | chr21:39889026-39888668 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 113 |
| Conread position: | 151-475 |
| Cow position: | chr21:28443641-28443335 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 151-513 |
| Cow position: | chr21:36793602-36793972 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 155-513 |
| Cow position: | chr21:24945173-24944818 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 186 |
| Conread position: | 156-517 |
| Cow position: | chr21:43357536-43357173 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 158-454 |
| Cow position: | chr21:23478989-23478697 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 168-479 |
| Cow position: | chr21:36819486-36819164 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 171-517 |
| Cow position: | chr21:21223024-21223363 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 188-511 |
| Cow position: | chr21:20426297-20426605 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 198-451 |
| Cow position: | chr21:42348911-42348657 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 247-517 |
| Cow position: | chr21:14452058-14452315 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 249-499 |
| Cow position: | chr21:47861017-47861260 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 252-516 |
| Cow position: | chr21:30150440-30150183 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 77 |
| Conread position: | 252-517 |
| Cow position: | chr21:39450340-39450080 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 253-513 |
| Cow position: | chr21:35997000-35997253 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 254-480 |
| Cow position: | chr21:28944538-28944319 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 254-515 |
| Cow position: | chr21:32665944-32665696 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 222, 19 |
| Conread position: | 255-517 |
| Cow position: | chr21:42135795-42135535 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 225, 91 |
| Conread position: | 256-438 |
| Cow position: | chr21:41579579-41579760 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 147, 16 |
| Conread position: | 256-451 |
| Cow position: | chr21:24714482-24714674 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 256-452 |
| Cow position: | chr21:42053435-42053248 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 256-463 |
| Cow position: | chr21:28626071-28626269 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 256-463 |
| Cow position: | chr21:45375445-45375651 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 130 |
| Conread position: | 256-496 |
| Cow position: | chr21:31764306-31764068 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 256-509 |
| Cow position: | chr21:44093609-44093856 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 256-512 |
| Cow position: | chr21:46242410-46242161 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 219, 67 |
| Conread position: | 256-515 |
| Cow position: | chr21:38449622-38449366 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 256-516 |
| Cow position: | chr21:34565383-34565129 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 216, 91 |
| Conread position: | 256-516 |
| Cow position: | chr21:45330778-45330523 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 130, 90 |
| Conread position: | 256-517 |
| Cow position: | chr21:4723309-4723562 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 52 |
| Conread position: | 256-517 |
| Cow position: | chr21:5636891-5636642 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 256-517 |
| Cow position: | chr21:13488349-13488608 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 256-517 |
| Cow position: | chr21:17674406-17674152 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 256-517 |
| Cow position: | chr21:22860831-22861083 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 210, 72 |
| Conread position: | 256-517 |
| Cow position: | chr21:23586706-23586963 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 218, 93 |
| Conread position: | 256-517 |
| Cow position: | chr21:25286339-25286598 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 206, 86 |
| Conread position: | 256-517 |
| Cow position: | chr21:29002332-29002074 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 216, 90 |
| Conread position: | 256-517 |
| Cow position: | chr21:29484813-29485063 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 222, 74 |
| Conread position: | 256-517 |
| Cow position: | chr21:35061918-35062168 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 202, 90 |
| Conread position: | 256-517 |
| Cow position: | chr21:37345272-37345020 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 147, 85 |
| Conread position: | 256-517 |
| Cow position: | chr21:49662287-49662040 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 209, 43 |
| Conread position: | 257-516 |
| Cow position: | chr21:34739677-34739924 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 257-517 |
| Cow position: | chr21:1591379-1591635 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 257-517 |
| Cow position: | chr21:18378675-18378924 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 187, 73 |
| Conread position: | 257-517 |
| Cow position: | chr21:33947416-33947168 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 207, 32 |
| Conread position: | 260-515 |
| Cow position: | chr21:9353274-9353526 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 212, 85 |
| Conread position: | 263-517 |
| Cow position: | chr21:31662297-31662548 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 223, 83 |
| Conread position: | 278-517 |
| Cow position: | chr21:29978910-29978679 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 283-455 |
| Cow position: | chr21:6058783-6058620 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 284-516 |
| Cow position: | chr21:41583127-41583355 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 285-515 |
| Cow position: | chr21:23980328-23980100 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 285-517 |
| Cow position: | chr21:957526-957754 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 302-513 |
| Cow position: | chr21:37886286-37886489 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 304-517 |
| Cow position: | chr21:45923770-45923570 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 315-453 |
| Cow position: | chr21:40312913-40312781 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 315-459 |
| Cow position: | chr21:41595599-41595740 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 315-482 |
| Cow position: | chr21:27810293-27810458 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 315-513 |
| Cow position: | chr21:26614782-26614584 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 315-516 |
| Cow position: | chr21:2412649-2412843 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 315-517 |
| Cow position: | chr21:6621435-6621238 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 315-517 |
| Cow position: | chr21:17428387-17428577 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 315-517 |
| Cow position: | chr21:18941945-18941753 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 315-517 |
| Cow position: | chr21:22353346-22353156 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 316-517 |
| Cow position: | chr21:6316095-6316299 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 324-517 |
| Cow position: | chr21:20418791-20418601 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 332-508 |
| Cow position: | chr21:4568187-4568357 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 332-510 |
| Cow position: | chr21:32904253-32904079 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 332-516 |
| Cow position: | chr21:12462068-12461887 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 332-517 |
| Cow position: | chr21:3818109-3818290 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 332-517 |
| Cow position: | chr21:41514706-41514890 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 333-517 |
| Cow position: | chr21:21181079-21181260 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 334-517 |
| Cow position: | chr21:25800300-25800481 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 357-516 |
| Cow position: | chr21:46552181-46552023 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 369-513 |
| Cow position: | chr21:35044373-35044230 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 388-517 |
| Cow position: | chr21:36371437-36371569 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 391-517 |
| Cow position: | chr21:23397891-23397765 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.