Cow genome map


           Conread name:
           rdbla0119_n20.y1
        

               Conread position:
               26-517
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               32-328
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               193, 27
               

               Conread position:
               32-464
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 27
               

               Conread position:
               32-517
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               33-298
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               188, 26
               

               Conread position:
               33-393
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               161, 26
               

               Conread position:
               33-429
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 26
               

               Conread position:
               33-429
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 15
               

               Conread position:
               33-442
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               180, 26
               

               Conread position:
               33-455
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               282
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               336, 26
               

               Conread position:
               33-455
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               33-462
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               188, 26
               

               Conread position:
               33-486
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               33-503
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               33-511
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               33-515
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               200, 22
               

               Conread position:
               33-517
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 26
               

               Conread position:
               33-517
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               152, 26
               

               Conread position:
               33-517
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 26
               

               Conread position:
               33-517
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 26
               

               Conread position:
               33-517
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               324
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               192, 24
               

               Conread position:
               33-517
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               192, 27
               

               Conread position:
               34-344
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               192, 25
               

               Conread position:
               34-359
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               194, 22
               

               Conread position:
               34-442
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               34-479
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 25
               

               Conread position:
               34-506
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               315
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               176, 25
               

               Conread position:
               34-516
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 25
               

               Conread position:
               34-517
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               320
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               199, 17
               

               Conread position:
               34-517
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               429, 25
               

               Conread position:
               36-477
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               189, 23
               

               Conread position:
               41-383
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               185, 18
               

               Conread position:
               41-464
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 19
               

               Conread position:
               41-497
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               41-517
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 13
               

               Conread position:
               48-508
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               51-516
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               174, 8
               

               Conread position:
               59-512
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               102, 53
               

               Conread position:
               60-412
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               173, 26
               

               Conread position:
               61-517
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               160, 198
               

               Conread position:
               84-342
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               146, 223
               

               Conread position:
               96-511
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 52
               

               Conread position:
               107-442
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               107-443
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               107-491
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 198
               

               Conread position:
               107-509
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               107-514
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 47
               

               Conread position:
               107-516
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               273
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               148, 14
               

               Conread position:
               107-516
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               118, 86
               

               Conread position:
               114-438
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               118-397
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               122-516
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               129-517
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               130-517
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               132-517
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 107
               

               Conread position:
               141-507
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               147-490
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               155-517
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 194
               

               Conread position:
               157-515
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               171-490
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               213, 53
               

               Conread position:
               180-473
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               249-514
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               251-430
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               253-455
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               254-494
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               255-478
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               200, 91
               

               Conread position:
               256-447
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               256-455
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               256-473
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               256-513
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               256-516
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               256-516
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               128, 93
               

               Conread position:
               256-517
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               200, 37
               

               Conread position:
               256-517
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               256-517
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 90
               

               Conread position:
               256-517
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               221, 90
               

               Conread position:
               257-465
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               257-514
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               258-464
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               258-515
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               198, 71
               

               Conread position:
               262-490
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               262-515
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               211, 50
               

               Conread position:
               262-517
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               269-454
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               283-504
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               183, 63
               

               Conread position:
               286-517
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               315-456
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               315-515
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               315-517
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               319-517
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               335-509
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               166, 12
               

               Conread position:
               343-491
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               358-517
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               361-517
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               366-517
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               366-517
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               384-515
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               90, 58
               
Show alignments to all cow chromosomes.