Cow genome map

Conread name: rdbla0119_n20.y1

Conread position: 9-442
Cow position: chr26:26671201-26670787 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 290
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 50

Conread position: 28-438
Cow position: chr26:798740-798341 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 266
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 197, 31

Conread position: 30-508
Cow position: chr26:2246504-2246983 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 24

Conread position: 31-488
Cow position: chr26:23272345-23272792 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 28

Conread position: 32-511
Cow position: chr26:783374-782902 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 28

Conread position: 32-516
Cow position: chr26:29353963-29353474 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 27

Conread position: 33-338
Cow position: chr26:11338052-11338349 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 222, 26

Conread position: 33-344
Cow position: chr26:1613743-1613438 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 187, 26

Conread position: 33-344
Cow position: chr26:7057585-7057279 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 201
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 26

Conread position: 33-429
Cow position: chr26:14395669-14395288 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 192, 26

Conread position: 33-453
Cow position: chr26:3922184-3921780 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 26

Conread position: 33-464
Cow position: chr26:387530-387950 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 268
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 188, 26

Conread position: 33-464
Cow position: chr26:8034423-8034849 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 165, 26

Conread position: 33-464
Cow position: chr26:19769520-19769101 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 148, 19

Conread position: 33-473
Cow position: chr26:13271112-13270683 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 200, 29

Conread position: 33-475
Cow position: chr26:3072399-3071971 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 288
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 29

Conread position: 33-489
Cow position: chr26:8503825-8504272 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 26

Conread position: 33-492
Cow position: chr26:2389499-2389039 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 26

Conread position: 33-514
Cow position: chr26:3755805-3756258 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 26

Conread position: 33-514
Cow position: chr26:9850521-9850066 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 33-514
Cow position: chr26:9854024-9853576 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 22

Conread position: 33-516
Cow position: chr26:16549571-16550017 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 319
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 33-517
Cow position: chr26:6475867-6475393 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 26

Conread position: 34-391
Cow position: chr26:11361865-11361514 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 199, 25

Conread position: 34-456
Cow position: chr26:10813779-10814175 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 34-492
Cow position: chr26:31794341-31794784 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 25

Conread position: 34-513
Cow position: chr26:9063904-9064371 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 25

Conread position: 34-517
Cow position: chr26:6037872-6037399 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 313
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 191, 25

Conread position: 34-517
Cow position: chr26:21912354-21912834 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 325
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 163, 25

Conread position: 34-517
Cow position: chr26:25393594-25394067 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 25

Conread position: 35-340
Cow position: chr26:16720486-16720785 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 185, 25

Conread position: 40-514
Cow position: chr26:21351269-21351724 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 309
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 182, 44

Conread position: 43-440
Cow position: chr26:18918507-18918117 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 16

Conread position: 47-446
Cow position: chr26:6323242-6323630 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 12

Conread position: 92-436
Cow position: chr26:2603982-2603641 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 153

Conread position: 98-397
Cow position: chr26:2623618-2623318 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 118, 213

Conread position: 107-517
Cow position: chr26:8700421-8700013 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 119, 247

Conread position: 108-473
Cow position: chr26:20185871-20186231 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 63

Conread position: 114-391
Cow position: chr26:14510357-14510088 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 111, 143

Conread position: 114-517
Cow position: chr26:26888497-26888099 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 267
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 107, 147

Conread position: 120-429
Cow position: chr26:32682756-32683067 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 99, 227

Conread position: 127-517
Cow position: chr26:20292033-20291658 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 135

Conread position: 133-513
Cow position: chr26:15938307-15938678 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 203

Conread position: 138-517
Cow position: chr26:11263304-11263675 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 88, 37

Conread position: 146-517
Cow position: chr26:16603960-16604321 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 188, 61

Conread position: 155-464
Cow position: chr26:13021473-13021161 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 108

Conread position: 161-501
Cow position: chr26:5685119-5685470 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 150

Conread position: 165-515
Cow position: chr26:3182251-3181907 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 291, 52

Conread position: 169-517
Cow position: chr26:19459367-19459727 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 6

Conread position: 176-517
Cow position: chr26:27491804-27491464 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 59

Conread position: 194-456
Cow position: chr26:8277856-8277591 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 157

Conread position: 249-513
Cow position: chr26:22622759-22623019 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 56

Conread position: 251-517
Cow position: chr26:7103258-7103005 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 95, 0

Conread position: 252-517
Cow position: chr26:14080498-14080741 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 254-512
Cow position: chr26:9632588-9632339 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 204, 14

Conread position: 254-517
Cow position: chr26:25737252-25737505 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 76

Conread position: 255-493
Cow position: chr26:8810914-8811144 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 203, 45

Conread position: 256-435
Cow position: chr26:33212584-33212410 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 256-452
Cow position: chr26:17675947-17675762 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 256-461
Cow position: chr26:32688212-32688416 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 90

Conread position: 256-464
Cow position: chr26:32659668-32659469 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 256-513
Cow position: chr26:6827949-6828195 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 256-513
Cow position: chr26:9666624-9666376 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 56, 45

Conread position: 256-513
Cow position: chr26:20129892-20129640 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 0

Conread position: 256-515
Cow position: chr26:12668981-12669232 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 119, 73

Conread position: 256-517
Cow position: chr26:2196808-2196557 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 44

Conread position: 256-517
Cow position: chr26:17204356-17204110 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 204, 55

Conread position: 256-517
Cow position: chr26:18719016-18719292 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 49

Conread position: 256-517
Cow position: chr26:19774521-19774265 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 90

Conread position: 256-517
Cow position: chr26:21242886-21243136 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 130, 74

Conread position: 257-511
Cow position: chr26:2770055-2769810 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 216, 44

Conread position: 257-515
Cow position: chr26:13801895-13802145 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 235, 89

Conread position: 261-516
Cow position: chr26:17288994-17289240 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 211, 40

Conread position: 261-517
Cow position: chr26:32866100-32865858 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 15

Conread position: 264-517
Cow position: chr26:2610011-2609771 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 265-460
Cow position: chr26:33227598-33227789 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 268-510
Cow position: chr26:33745708-33745950 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 50

Conread position: 281-517
Cow position: chr26:19110710-19110947 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 23

Conread position: 289-517
Cow position: chr26:3019612-3019380 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 57

Conread position: 314-517
Cow position: chr26:32672603-32672403 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 83

Conread position: 315-515
Cow position: chr26:22249640-22249445 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 31

Conread position: 315-517
Cow position: chr26:30605521-30605323 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 165, 23

Conread position: 351-517
Cow position: chr26:27585645-27585810 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 123, 34

Conread position: 373-513
Cow position: chr26:17155433-17155291 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 385-517
Cow position: chr26:6299040-6299174 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 110

Show alignments to all cow chromosomes.