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Cow genome map

           
Conread name:
           
rdbla0119_n20.y1
        

               
Conread position:
               
3-517
               

               
Cow position:
               
chr4:22138723-22138212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr4:38467140-38467452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr4:24119373-24118969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
197, 28
               

               
Conread position:
               
32-479
               

               
Cow position:
               
chr4:42672712-42673145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
202, 27
               

               
Conread position:
               
32-509
               

               
Cow position:
               
chr4:36812923-36813380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
32-513
               

               
Cow position:
               
chr4:45239826-45240281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
32-515
               

               
Cow position:
               
chr4:37620351-37619880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
32-517
               

               
Cow position:
               
chr4:27277002-27276534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
189, 27
               

               
Conread position:
               
33-345
               

               
Cow position:
               
chr4:46492432-46492740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
33-382
               

               
Cow position:
               
chr4:49409008-49409348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr4:47087549-47087210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
202, 26
               

               
Conread position:
               
33-431
               

               
Cow position:
               
chr4:35929969-35930358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
33-454
               

               
Cow position:
               
chr4:61272093-61271680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 26
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr4:16602512-16602103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr4:22101722-22101310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
201, 28
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr4:25878940-25879348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr4:37703808-37704216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-455
               

               
Cow position:
               
chr4:57555501-57555921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 26
               

               
Conread position:
               
33-456
               

               
Cow position:
               
chr4:22073760-22073364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
189, 8
               

               
Conread position:
               
33-463
               

               
Cow position:
               
chr4:55271214-55270800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
162, 26
               

               
Conread position:
               
33-463
               

               
Cow position:
               
chr4:58857196-58856776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
33-463
               

               
Cow position:
               
chr4:68944634-68944213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
33-474
               

               
Cow position:
               
chr4:39009512-39009933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-511
               

               
Cow position:
               
chr4:16340053-16339596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
33-513
               

               
Cow position:
               
chr4:27755769-27755298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
33-513
               

               
Cow position:
               
chr4:59333434-59332976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
33-514
               

               
Cow position:
               
chr4:61897990-61897528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 28
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr4:38799659-38799190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr4:53999978-53999501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
33-516
               

               
Cow position:
               
chr4:56233234-56233691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:3439933-3440410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 15
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:3850094-3850561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:10992666-10992187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:13589637-13590093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:22528864-22528373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:25972435-25972910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 22
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:27997225-27997697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:28378110-28377649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 18
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:36892897-36893369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:38181231-38181692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
440, 26
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:45918570-45919048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:47774092-47773629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
33-517
               

               
Cow position:
               
chr4:53545584-53546036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
245, 26
               

               
Conread position:
               
34-344
               

               
Cow position:
               
chr4:36815624-36815935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
34-363
               

               
Cow position:
               
chr4:37878970-37879305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
34-364
               

               
Cow position:
               
chr4:38067432-38067748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
34-382
               

               
Cow position:
               
chr4:43752703-43753060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
34-443
               

               
Cow position:
               
chr4:22051925-22051535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
176, 25
               

               
Conread position:
               
34-444
               

               
Cow position:
               
chr4:56852442-56852842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
34-455
               

               
Cow position:
               
chr4:27540164-27540564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
34-455
               

               
Cow position:
               
chr4:38998976-38999377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
34-462
               

               
Cow position:
               
chr4:26400500-26400919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
200, 25
               

               
Conread position:
               
34-502
               

               
Cow position:
               
chr4:46862039-46861598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
34-515
               

               
Cow position:
               
chr4:34166424-34165965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
34-516
               

               
Cow position:
               
chr4:35940452-35939998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr4:6166796-6166292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr4:26323285-26323750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
411, 25
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr4:30973889-30974346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr4:41441108-41441577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr4:44839340-44838882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
34-517
               

               
Cow position:
               
chr4:65919166-65919621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
230, 25
               

               
Conread position:
               
35-307
               

               
Cow position:
               
chr4:44645684-44645424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
35-429
               

               
Cow position:
               
chr4:11091136-11090770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
186, 17
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr4:45644767-45644370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
35-456
               

               
Cow position:
               
chr4:20328169-20327760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
35-514
               

               
Cow position:
               
chr4:19096841-19097295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
198, 24
               

               
Conread position:
               
35-515
               

               
Cow position:
               
chr4:13327410-13326943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 25
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr4:30690282-30690725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr4:40415104-40414618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr4:47730416-47730868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
426, 11
               

               
Conread position:
               
36-473
               

               
Cow position:
               
chr4:1237563-1237147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
409, 10
               

               
Conread position:
               
36-490
               

               
Cow position:
               
chr4:23494454-23494910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
37-464
               

               
Cow position:
               
chr4:9815804-9815389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
37-517
               

               
Cow position:
               
chr4:20139981-20139505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
184, 22
               

               
Conread position:
               
39-497
               

               
Cow position:
               
chr4:23565048-23565504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
41-461
               

               
Cow position:
               
chr4:61954110-61954508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
41-517
               

               
Cow position:
               
chr4:15904657-15905110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
182, 51
               

               
Conread position:
               
47-438
               

               
Cow position:
               
chr4:46274743-46275125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
47-455
               

               
Cow position:
               
chr4:14159575-14159176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
47-517
               

               
Cow position:
               
chr4:25197941-25197485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 12
               

               
Conread position:
               
48-426
               

               
Cow position:
               
chr4:61304870-61304498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
206, 38
               

               
Conread position:
               
48-517
               

               
Cow position:
               
chr4:15635886-15635438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
49-514
               

               
Cow position:
               
chr4:23382249-23381807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
58-422
               

               
Cow position:
               
chr4:19497681-19497335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr4:8649808-8650225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 28
               

               
Conread position:
               
61-470
               

               
Cow position:
               
chr4:8692592-8692208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
64-513
               

               
Cow position:
               
chr4:15282929-15283372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
64-515
               

               
Cow position:
               
chr4:6443511-6443074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
84-512
               

               
Cow position:
               
chr4:12697226-12697644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 130
               

               
Conread position:
               
91-517
               

               
Cow position:
               
chr4:19306845-19307271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 259
               

               
Conread position:
               
92-511
               

               
Cow position:
               
chr4:62618097-62618521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
93-393
               

               
Cow position:
               
chr4:20562207-20562509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
126, 218
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr4:1373995-1374201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
101-473
               

               
Cow position:
               
chr4:25906726-25906360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
104-461
               

               
Cow position:
               
chr4:27292357-27291999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
106-429
               

               
Cow position:
               
chr4:52017244-52016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
106-514
               

               
Cow position:
               
chr4:68387399-68387800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 114
               

               
Conread position:
               
106-517
               

               
Cow position:
               
chr4:23311656-23311250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 119
               

               
Conread position:
               
107-444
               

               
Cow position:
               
chr4:53207913-53208233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
107-455
               

               
Cow position:
               
chr4:12903422-12903768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 191
               

               
Conread position:
               
107-492
               

               
Cow position:
               
chr4:54501844-54501460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
112, 155
               

               
Conread position:
               
107-500
               

               
Cow position:
               
chr4:5984441-5984050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 245
               

               
Conread position:
               
107-513
               

               
Cow position:
               
chr4:16799583-16799180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 97
               

               
Conread position:
               
107-513
               

               
Cow position:
               
chr4:24458494-24458097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 211
               

               
Conread position:
               
107-514
               

               
Cow position:
               
chr4:53208844-53209244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
127, 236
               

               
Conread position:
               
107-517
               

               
Cow position:
               
chr4:14152678-14153105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 156
               

               
Conread position:
               
107-517
               

               
Cow position:
               
chr4:21058785-21058366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
103, 248
               

               
Conread position:
               
107-517
               

               
Cow position:
               
chr4:32260242-32259835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
119, 210
               

               
Conread position:
               
113-493
               

               
Cow position:
               
chr4:65116601-65116213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 197
               

               
Conread position:
               
113-517
               

               
Cow position:
               
chr4:33433645-33433246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 120
               

               
Conread position:
               
114-430
               

               
Cow position:
               
chr4:6822089-6822393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
114-517
               

               
Cow position:
               
chr4:58248024-58248415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
115-501
               

               
Cow position:
               
chr4:61399813-61399446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
120-517
               

               
Cow position:
               
chr4:11901942-11901551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
105, 139
               

               
Conread position:
               
121-298
               

               
Cow position:
               
chr4:48142399-48142581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
121-477
               

               
Cow position:
               
chr4:11100044-11099697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
123-490
               

               
Cow position:
               
chr4:34209652-34210018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr4:21392175-21391802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
369, 15
               

               
Conread position:
               
125-429
               

               
Cow position:
               
chr4:19141918-19142217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 100
               

               
Conread position:
               
126-478
               

               
Cow position:
               
chr4:43909395-43909717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
343, 94
               

               
Conread position:
               
128-448
               

               
Cow position:
               
chr4:12700729-12700399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
129-517
               

               
Cow position:
               
chr4:11671081-11671462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
133-517
               

               
Cow position:
               
chr4:44665738-44665362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
138-493
               

               
Cow position:
               
chr4:65168369-65168016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 209
               

               
Conread position:
               
138-517
               

               
Cow position:
               
chr4:49001666-49001283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 173
               

               
Conread position:
               
139-405
               

               
Cow position:
               
chr4:61191109-61191377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
139-473
               

               
Cow position:
               
chr4:18489755-18489415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
142-394
               

               
Cow position:
               
chr4:51289356-51289612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 164
               

               
Conread position:
               
153-512
               

               
Cow position:
               
chr4:19265224-19265580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
153-516
               

               
Cow position:
               
chr4:44496037-44496382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
156-429
               

               
Cow position:
               
chr4:42424146-42423877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
156-516
               

               
Cow position:
               
chr4:31023100-31023461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
158-444
               

               
Cow position:
               
chr4:37470210-37470490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
158-477
               

               
Cow position:
               
chr4:45577-45893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
175-444
               

               
Cow position:
               
chr4:21064328-21064066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr4:19597634-19597315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
229-517
               

               
Cow position:
               
chr4:59565272-59565553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 68
               

               
Conread position:
               
242-492
               

               
Cow position:
               
chr4:9547724-9547959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
233, 42
               

               
Conread position:
               
242-516
               

               
Cow position:
               
chr4:21073404-21073143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
224, 39
               

               
Conread position:
               
242-517
               

               
Cow position:
               
chr4:27687668-27687937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
233, 70
               

               
Conread position:
               
243-456
               

               
Cow position:
               
chr4:47445018-47444818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
249-517
               

               
Cow position:
               
chr4:5797724-5797976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
219, 85
               

               
Conread position:
               
250-511
               

               
Cow position:
               
chr4:31172423-31172681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
222, 96
               

               
Conread position:
               
250-516
               

               
Cow position:
               
chr4:60371077-60370817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
251-517
               

               
Cow position:
               
chr4:52225763-52226015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr4:24415042-24415237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
252-512
               

               
Cow position:
               
chr4:22115361-22115614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
252-513
               

               
Cow position:
               
chr4:51408208-51407964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
213, 48
               

               
Conread position:
               
253-451
               

               
Cow position:
               
chr4:18577020-18576828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
253-516
               

               
Cow position:
               
chr4:69509054-69509304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
253-517
               

               
Cow position:
               
chr4:20299026-20299285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
254-513
               

               
Cow position:
               
chr4:13406462-13406715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
254-517
               

               
Cow position:
               
chr4:9912487-9912740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
255-478
               

               
Cow position:
               
chr4:59008612-59008396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
255-501
               

               
Cow position:
               
chr4:27664763-27665007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 91
               

               
Conread position:
               
256-433
               

               
Cow position:
               
chr4:620395-620222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-438
               

               
Cow position:
               
chr4:36730949-36731127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
256-443
               

               
Cow position:
               
chr4:27529872-27530055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-456
               

               
Cow position:
               
chr4:7213827-7213631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
256-462
               

               
Cow position:
               
chr4:34310696-34310493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-463
               

               
Cow position:
               
chr4:44073011-44072807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
256-463
               

               
Cow position:
               
chr4:59833699-59833903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
256-475
               

               
Cow position:
               
chr4:58948153-58947942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
256-485
               

               
Cow position:
               
chr4:9482459-9482233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
256-490
               

               
Cow position:
               
chr4:17660446-17660205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
256-491
               

               
Cow position:
               
chr4:21233112-21232883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
256-507
               

               
Cow position:
               
chr4:33612604-33612357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
256-509
               

               
Cow position:
               
chr4:27372099-27371857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
256-510
               

               
Cow position:
               
chr4:27561155-27561400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
256-510
               

               
Cow position:
               
chr4:36755509-36755747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
217, 90
               

               
Conread position:
               
256-511
               

               
Cow position:
               
chr4:12914042-12913792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
256-512
               

               
Cow position:
               
chr4:35981748-35982001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr4:6792200-6792444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr4:45114847-45114599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr4:47289829-47290084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
256-514
               

               
Cow position:
               
chr4:29291281-29291523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
256-514
               

               
Cow position:
               
chr4:46083137-46082882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
256-515
               

               
Cow position:
               
chr4:51122816-51123067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
216, 53
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr4:24187859-24187602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr4:52748699-52748445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
208, 44
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr4:68795547-68795284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 69
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:4321247-4320992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:5999435-5999180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:11897540-11897285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
216, 93
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:18439814-18439555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
209, 90
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:19322320-19322068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
175, 74
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:20279098-20279338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:23509347-23509606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:23847292-23847039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
236, 78
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:32725981-32726234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:35869974-35870215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:47348591-47348839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
139, 31
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:56570563-56570816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:59785076-59785332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
200, 76
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr4:61624832-61624576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
257-488
               

               
Cow position:
               
chr4:62411632-62411862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
257-514
               

               
Cow position:
               
chr4:53752270-53752533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr4:45367493-45367747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
257-517
               

               
Cow position:
               
chr4:22249686-22249435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
257-517
               

               
Cow position:
               
chr4:33357691-33357946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
229, 46
               

               
Conread position:
               
257-517
               

               
Cow position:
               
chr4:41301231-41300983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
258-475
               

               
Cow position:
               
chr4:53554056-53554266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr4:6208228-6208468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr4:58512803-58512554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr4:23445291-23445036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr4:33030318-33030562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr4:54146714-54146452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
260-514
               

               
Cow position:
               
chr4:14550613-14550848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
261-463
               

               
Cow position:
               
chr4:23911825-23911625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
262-517
               

               
Cow position:
               
chr4:11331854-11332103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
263-513
               

               
Cow position:
               
chr4:52597716-52597472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
264-517
               

               
Cow position:
               
chr4:21258983-21259228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
270-517
               

               
Cow position:
               
chr4:45952601-45952369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
274-517
               

               
Cow position:
               
chr4:36945415-36945182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
199, 54
               

               
Conread position:
               
283-514
               

               
Cow position:
               
chr4:19744669-19744895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
283-517
               

               
Cow position:
               
chr4:21365191-21365419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
283-517
               

               
Cow position:
               
chr4:34924907-34924680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
207, 63
               

               
Conread position:
               
284-517
               

               
Cow position:
               
chr4:39767132-39767364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
190, 58
               

               
Conread position:
               
284-517
               

               
Cow position:
               
chr4:40623309-40623087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 41
               

               
Conread position:
               
289-513
               

               
Cow position:
               
chr4:26541526-26541741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
292-517
               

               
Cow position:
               
chr4:51768907-51769116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
309-517
               

               
Cow position:
               
chr4:23166714-23166918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
314-517
               

               
Cow position:
               
chr4:51727889-51728087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
315-463
               

               
Cow position:
               
chr4:5553975-5553829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr4:21517187-21516995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr4:22713677-22713484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
315-517
               

               
Cow position:
               
chr4:50769950-50769757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
316-517
               

               
Cow position:
               
chr4:23758619-23758817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
322-517
               

               
Cow position:
               
chr4:15784988-15784797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
327-517
               

               
Cow position:
               
chr4:41154470-41154658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
333-517
               

               
Cow position:
               
chr4:10837548-10837370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
341-517
               

               
Cow position:
               
chr4:30131183-30131350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
344-517
               

               
Cow position:
               
chr4:63784281-63784110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
347-511
               

               
Cow position:
               
chr4:63418080-63417918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 38
               

               
Conread position:
               
353-509
               

               
Cow position:
               
chr4:45116211-45116055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
355-517
               

               
Cow position:
               
chr4:37880784-37880945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
370-514
               

               
Cow position:
               
chr4:5913482-5913339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
371-517
               

               
Cow position:
               
chr4:30771-30624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
381-517
               

               
Cow position:
               
chr4:5580436-5580568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
387-517
               

               
Cow position:
               
chr4:21250145-21250022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
389-501
               

               
Cow position:
               
chr4:66125293-66125407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
395-517
               

               
Cow position:
               
chr4:48283391-48283267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               
Show alignments to all cow chromosomes.