Cow genome map

Conread name: rdbla0119_n20.y1

Conread position: 8-517
Cow position: chr9:11870721-11870218 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 11-429
Cow position: chr9:38385371-38385777 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 12-517
Cow position: chr9:8534185-8534678 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 36

Conread position: 12-517
Cow position: chr9:31078583-31079070 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 47

Conread position: 23-513
Cow position: chr9:41317458-41317957 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 337
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 49, 32

Conread position: 27-463
Cow position: chr9:59171895-59172321 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 193, 22

Conread position: 27-517
Cow position: chr9:19382816-19382338 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 20

Conread position: 30-463
Cow position: chr9:2863910-2863492 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 287
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 213, 31

Conread position: 31-511
Cow position: chr9:5621533-5622020 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 32-517
Cow position: chr9:35375902-35375437 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 323
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 201, 29

Conread position: 33-371
Cow position: chr9:26478036-26477715 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 57

Conread position: 33-383
Cow position: chr9:44579558-44579208 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 26

Conread position: 33-411
Cow position: chr9:44518041-44517677 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 26

Conread position: 33-415
Cow position: chr9:37017364-37016995 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 26

Conread position: 33-455
Cow position: chr9:6191984-6192390 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 288
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 188, 26

Conread position: 33-455
Cow position: chr9:7410259-7409849 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 187, 27

Conread position: 33-462
Cow position: chr9:8998036-8997614 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 290
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 200, 27

Conread position: 33-463
Cow position: chr9:53607914-53608331 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 22

Conread position: 33-469
Cow position: chr9:49982625-49983042 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 286
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 192, 26

Conread position: 33-478
Cow position: chr9:11146183-11146608 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 51

Conread position: 33-485
Cow position: chr9:32265907-32266357 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 33-493
Cow position: chr9:20393650-20394085 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 13

Conread position: 33-495
Cow position: chr9:22361493-22361051 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 26

Conread position: 33-501
Cow position: chr9:8612786-8612306 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 26

Conread position: 33-512
Cow position: chr9:1950398-1949938 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 192, 27

Conread position: 33-512
Cow position: chr9:62131696-62132168 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 26

Conread position: 33-514
Cow position: chr9:12356336-12355868 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 33-514
Cow position: chr9:33669205-33668744 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 255, 26

Conread position: 33-514
Cow position: chr9:34092926-34093426 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 27

Conread position: 33-514
Cow position: chr9:34310522-34310039 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 33-514
Cow position: chr9:38546885-38546426 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 26

Conread position: 33-515
Cow position: chr9:5501319-5500867 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 326
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 192, 26

Conread position: 33-516
Cow position: chr9:21462360-21462857 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 26

Conread position: 33-516
Cow position: chr9:34696816-34697289 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 329
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 193, 26

Conread position: 33-517
Cow position: chr9:3932447-3931972 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 27

Conread position: 33-517
Cow position: chr9:4859030-4858548 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 26

Conread position: 33-517
Cow position: chr9:5510204-5509736 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 26

Conread position: 33-517
Cow position: chr9:8099341-8099814 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 26

Conread position: 33-517
Cow position: chr9:9200243-9200712 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 16

Conread position: 33-517
Cow position: chr9:34204609-34204141 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 26

Conread position: 33-517
Cow position: chr9:36446105-36445632 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 323
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 114, 53

Conread position: 33-517
Cow position: chr9:39681838-39681351 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 332
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 192, 28

Conread position: 33-517
Cow position: chr9:46316309-46316771 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 15

Conread position: 33-517
Cow position: chr9:48773810-48773361 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 33-517
Cow position: chr9:54528994-54528524 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 319
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 188, 26

Conread position: 34-363
Cow position: chr9:24428133-24428460 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 192, 26

Conread position: 34-422
Cow position: chr9:16300090-16300464 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 191, 25

Conread position: 34-456
Cow position: chr9:52504825-52505240 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 192, 25

Conread position: 34-464
Cow position: chr9:64453639-64454059 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 46

Conread position: 34-480
Cow position: chr9:2910574-2910170 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 34-484
Cow position: chr9:18093171-18093625 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 92, 20

Conread position: 34-509
Cow position: chr9:1520250-1520717 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 25

Conread position: 34-513
Cow position: chr9:52724721-52725201 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 331
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 143, 25

Conread position: 34-516
Cow position: chr9:2482301-2481835 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 315
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 27

Conread position: 34-517
Cow position: chr9:20988962-20989438 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 330
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 7, 27

Conread position: 34-517
Cow position: chr9:29808946-29808465 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 21

Conread position: 34-517
Cow position: chr9:42445495-42445971 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 322
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 192, 25

Conread position: 34-517
Cow position: chr9:54610749-54611224 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 12

Conread position: 35-393
Cow position: chr9:17568621-17568267 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 204, 24

Conread position: 35-455
Cow position: chr9:9491266-9490864 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 280
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 186, 6

Conread position: 35-463
Cow position: chr9:29007045-29006626 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 286
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 156, 24

Conread position: 35-477
Cow position: chr9:45285066-45285477 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 286
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 26

Conread position: 35-509
Cow position: chr9:3388168-3387709 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 315
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 191, 24

Conread position: 35-515
Cow position: chr9:39428328-39428786 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 12

Conread position: 35-517
Cow position: chr9:7634741-7634283 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 20

Conread position: 35-517
Cow position: chr9:25469490-25469058 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 334
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 24

Conread position: 35-517
Cow position: chr9:55074659-55075120 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 326
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 186, 21

Conread position: 36-511
Cow position: chr9:18110386-18110852 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 36-516
Cow position: chr9:10127184-10127660 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 37-503
Cow position: chr9:32396427-32395974 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 22

Conread position: 40-517
Cow position: chr9:9461185-9461645 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 49

Conread position: 41-477
Cow position: chr9:44466877-44467298 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 298
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 182, 18

Conread position: 44-495
Cow position: chr9:21674507-21674962 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 314
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 16

Conread position: 47-479
Cow position: chr9:44108361-44108780 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 48-513
Cow position: chr9:5141543-5141088 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 317
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 173, 12

Conread position: 49-517
Cow position: chr9:8998818-8998361 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 313
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 171, 37

Conread position: 58-517
Cow position: chr9:3724601-3725052 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 28

Conread position: 59-514
Cow position: chr9:14185147-14184676 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 61-517
Cow position: chr9:33682127-33681686 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 297
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 395, 25

Conread position: 63-516
Cow position: chr9:214006-214448 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 23

Conread position: 88-464
Cow position: chr9:35369319-35368944 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 24, 177

Conread position: 98-517
Cow position: chr9:52633084-52633484 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 156

Conread position: 101-514
Cow position: chr9:3594105-3594519 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 101-517
Cow position: chr9:20038737-20039123 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 162

Conread position: 104-517
Cow position: chr9:9552504-9552102 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 10

Conread position: 105-516
Cow position: chr9:56861430-56861018 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 107-500
Cow position: chr9:30664365-30664752 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 113

Conread position: 108-461
Cow position: chr9:20810650-20810998 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 115

Conread position: 108-517
Cow position: chr9:22318754-22318362 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 113, 197

Conread position: 114-463
Cow position: chr9:64092093-64091748 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 32

Conread position: 114-510
Cow position: chr9:5071204-5071585 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 107, 99

Conread position: 115-462
Cow position: chr9:12321655-12321990 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 5

Conread position: 120-517
Cow position: chr9:1951866-1952258 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 262
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 113, 206

Conread position: 128-455
Cow position: chr9:32812741-32812416 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 105, 34

Conread position: 128-517
Cow position: chr9:3169123-3169515 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 183

Conread position: 130-456
Cow position: chr9:25964430-25964760 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 213
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 226

Conread position: 130-488
Cow position: chr9:42998068-42998430 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 141

Conread position: 133-509
Cow position: chr9:18002561-18002934 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 242
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 130, 169

Conread position: 139-517
Cow position: chr9:5434014-5433644 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 94, 10

Conread position: 142-409
Cow position: chr9:10149684-10149952 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 208

Conread position: 142-517
Cow position: chr9:34957670-34958044 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 113, 83

Conread position: 146-517
Cow position: chr9:61997219-61997586 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 246
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 24

Conread position: 148-517
Cow position: chr9:56253277-56252908 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 162

Conread position: 149-496
Cow position: chr9:52409080-52409427 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 159

Conread position: 150-517
Cow position: chr9:22114267-22114624 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 22

Conread position: 151-514
Cow position: chr9:13205197-13205557 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 152

Conread position: 156-513
Cow position: chr9:39152319-39152667 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 69, 146

Conread position: 156-517
Cow position: chr9:26404157-26403797 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 195

Conread position: 159-517
Cow position: chr9:38344260-38343899 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 66, 169

Conread position: 160-515
Cow position: chr9:54997662-54998015 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 12

Conread position: 168-482
Cow position: chr9:11830364-11830056 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 142

Conread position: 169-517
Cow position: chr9:21030672-21030320 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 229
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 137

Conread position: 173-517
Cow position: chr9:2113659-2113995 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 85

Conread position: 194-517
Cow position: chr9:32677012-32676689 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 153

Conread position: 197-516
Cow position: chr9:23527475-23527777 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 21

Conread position: 219-477
Cow position: chr9:8740813-8740563 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 18

Conread position: 243-451
Cow position: chr9:9595679-9595879 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 245-454
Cow position: chr9:25502264-25502471 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 247-448
Cow position: chr9:3782635-3782438 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 249-517
Cow position: chr9:6225182-6225443 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 133, 87

Conread position: 250-516
Cow position: chr9:63905336-63905594 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 14

Conread position: 251-517
Cow position: chr9:8599871-8599618 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 49

Conread position: 253-434
Cow position: chr9:40060061-40060243 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 132, 93

Conread position: 253-494
Cow position: chr9:17806258-17806029 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 253-509
Cow position: chr9:32732420-32732673 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 157, 77

Conread position: 253-517
Cow position: chr9:17310296-17310553 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 172
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 237, 62

Conread position: 253-517
Cow position: chr9:52787271-52787530 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 156, 77

Conread position: 254-448
Cow position: chr9:10678468-10678282 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 256-417
Cow position: chr9:33067310-33067139 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 50

Conread position: 256-450
Cow position: chr9:8914529-8914342 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 51

Conread position: 256-455
Cow position: chr9:33598244-33598052 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 256-461
Cow position: chr9:41653052-41652851 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 256-475
Cow position: chr9:26828558-26828769 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 149, 90

Conread position: 256-493
Cow position: chr9:8600599-8600362 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 68

Conread position: 256-494
Cow position: chr9:30020242-30020002 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 135

Conread position: 256-498
Cow position: chr9:27052070-27052310 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 90

Conread position: 256-500
Cow position: chr9:30749322-30749561 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 72

Conread position: 256-510
Cow position: chr9:14961212-14960966 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 200, 69

Conread position: 256-511
Cow position: chr9:5029778-5029527 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 74

Conread position: 256-513
Cow position: chr9:5532216-5531961 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 90

Conread position: 256-513
Cow position: chr9:9957083-9956835 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 210, 73

Conread position: 256-513
Cow position: chr9:47875684-47875945 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 49

Conread position: 256-514
Cow position: chr9:16745940-16745687 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 204, 36

Conread position: 256-515
Cow position: chr9:54924889-54924632 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 49

Conread position: 256-516
Cow position: chr9:8951166-8950917 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 49

Conread position: 256-516
Cow position: chr9:11201842-11201602 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 210, 36

Conread position: 256-516
Cow position: chr9:30189363-30189108 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 216, 89

Conread position: 256-516
Cow position: chr9:35850162-35849917 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 222, 73

Conread position: 256-516
Cow position: chr9:37098970-37099226 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 160, 73

Conread position: 256-516
Cow position: chr9:43037746-43037495 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 123, 90

Conread position: 256-516
Cow position: chr9:54437516-54437277 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 256-517
Cow position: chr9:5226901-5227161 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 90

Conread position: 256-517
Cow position: chr9:10666761-10667014 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 256-517
Cow position: chr9:19637375-19637621 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 49

Conread position: 256-517
Cow position: chr9:20839877-20839636 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 256-517
Cow position: chr9:24997253-24997507 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 35

Conread position: 256-517
Cow position: chr9:26278910-26279157 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 50

Conread position: 256-517
Cow position: chr9:29108800-29108548 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 256-517
Cow position: chr9:43912192-43911939 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 249, 90

Conread position: 256-517
Cow position: chr9:50544370-50544618 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 216, 74

Conread position: 256-517
Cow position: chr9:55084034-55084292 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 128, 52

Conread position: 256-517
Cow position: chr9:58669643-58669389 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 155, 17

Conread position: 257-502
Cow position: chr9:847657-847889 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 48

Conread position: 257-514
Cow position: chr9:59924806-59924555 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 74

Conread position: 257-516
Cow position: chr9:44218024-44217781 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 236, 67

Conread position: 257-517
Cow position: chr9:4861654-4861396 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 215, 89

Conread position: 257-517
Cow position: chr9:8657172-8657419 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 48

Conread position: 257-517
Cow position: chr9:31587835-31588091 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 44, 49

Conread position: 257-517
Cow position: chr9:50295761-50296023 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 201, 85

Conread position: 258-513
Cow position: chr9:51311935-51311685 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 77

Conread position: 258-517
Cow position: chr9:23043036-23042786 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 215, 45

Conread position: 258-517
Cow position: chr9:24399424-24399673 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 72

Conread position: 258-517
Cow position: chr9:44553008-44552758 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 47

Conread position: 260-516
Cow position: chr9:58979660-58979410 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 260-517
Cow position: chr9:3186400-3186138 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 16

Conread position: 261-456
Cow position: chr9:8563099-8562908 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 45

Conread position: 261-515
Cow position: chr9:55118336-55118096 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 212, 31

Conread position: 261-517
Cow position: chr9:41958537-41958774 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 45

Conread position: 273-477
Cow position: chr9:10144226-10144427 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 283-517
Cow position: chr9:40604186-40603957 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 61

Conread position: 284-517
Cow position: chr9:15006516-15006742 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 174, 62

Conread position: 287-514
Cow position: chr9:42901279-42901057 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 19

Conread position: 315-475
Cow position: chr9:11102611-11102763 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 315-484
Cow position: chr9:46227080-46226907 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 31

Conread position: 316-517
Cow position: chr9:32848094-32847897 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 124, 14

Conread position: 319-517
Cow position: chr9:11364093-11363903 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 147, 19

Conread position: 320-516
Cow position: chr9:15684588-15684775 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 152, 20

Conread position: 324-517
Cow position: chr9:42037852-42037664 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 16

Conread position: 332-481
Cow position: chr9:48133920-48133771 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 14

Conread position: 332-501
Cow position: chr9:42173001-42173172 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 14

Conread position: 332-517
Cow position: chr9:32816943-32817130 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 14

Conread position: 336-517
Cow position: chr9:9823319-9823494 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 336-517
Cow position: chr9:34106909-34106735 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 339-517
Cow position: chr9:11168917-11168742 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 70

Conread position: 344-517
Cow position: chr9:8901043-8901215 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 22

Conread position: 352-517
Cow position: chr9:41957977-41957814 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 33

Conread position: 357-516
Cow position: chr9:20897069-20896909 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 28

Conread position: 366-513
Cow position: chr9:24837689-24837551 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 375-517
Cow position: chr9:15034061-15033914 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 72

Conread position: 387-515
Cow position: chr9:50004133-50004004 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 388-514
Cow position: chr9:5172470-5172341 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 27

Show alignments to all cow chromosomes.