Cow genome map
| Conread name: | rebs07c_e14.y1 |
| Conread position: | 1-152 |
| Cow position: | chr12:9894688-9894838 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 1-154 |
| Cow position: | chr12:25452543-25452389 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-157 |
| Cow position: | chr12:1333132-1333292 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-157 |
| Cow position: | chr12:10491174-10491332 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 1-158 |
| Cow position: | chr12:22881958-22882118 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:5714532-5714691 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 1-159 |
| Cow position: | chr12:34007209-34007364 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 1-160 |
| Cow position: | chr12:8868973-8868818 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 1-161 |
| Cow position: | chr12:42966903-42967060 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 1-162 |
| Cow position: | chr12:12304289-12304446 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 1-162 |
| Cow position: | chr12:24211316-24211473 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 1-162 |
| Cow position: | chr12:38774335-38774177 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 22 |
| Conread position: | 1-162 |
| Cow position: | chr12:42233960-42234125 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 158 |
| Conread position: | 1-163 |
| Cow position: | chr12:2711400-2711565 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 1-163 |
| Cow position: | chr12:6210253-6210091 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 1-163 |
| Cow position: | chr12:8943316-8943157 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 1-163 |
| Cow position: | chr12:10942189-10942354 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-163 |
| Cow position: | chr12:23798007-23798166 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 1-163 |
| Cow position: | chr12:28582600-28582443 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 86 |
| Conread position: | 1-163 |
| Cow position: | chr12:42254571-42254734 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 1-163 |
| Cow position: | chr12:44517832-44517671 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 1-164 |
| Cow position: | chr12:30590671-30590835 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 1-165 |
| Cow position: | chr12:29995555-29995395 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 1-165 |
| Cow position: | chr12:30662043-30661881 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 1-166 |
| Cow position: | chr12:3950443-3950275 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:4341836-4341674 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 1-166 |
| Cow position: | chr12:5680584-5680753 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:6410830-6410664 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 1-166 |
| Cow position: | chr12:7110104-7110267 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 1-166 |
| Cow position: | chr12:7977939-7978107 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 1-166 |
| Cow position: | chr12:15699976-15700150 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 136 |
| Conread position: | 1-166 |
| Cow position: | chr12:19258183-19258347 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 1-166 |
| Cow position: | chr12:26750055-26749882 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:29969484-29969649 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 1-166 |
| Cow position: | chr12:31517269-31517101 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:33976105-33976269 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 1-166 |
| Cow position: | chr12:35368545-35368712 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:37008800-37008637 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 1-166 |
| Cow position: | chr12:42285872-42286040 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:44595907-44595740 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-166 |
| Cow position: | chr12:46314800-46314634 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 1-170 |
| Cow position: | chr12:4596369-4596538 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 1-170 |
| Cow position: | chr12:18523467-18523643 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-170 |
| Cow position: | chr12:21922353-21922524 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 1-170 |
| Cow position: | chr12:25188090-25188262 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 1-170 |
| Cow position: | chr12:31269054-31269227 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 1-170 |
| Cow position: | chr12:31429666-31429497 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 1-170 |
| Cow position: | chr12:33851262-33851431 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 1-170 |
| Cow position: | chr12:34466103-34465930 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 1-170 |
| Cow position: | chr12:42181234-42181055 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-171 |
| Cow position: | chr12:19715136-19714965 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 1-171 |
| Cow position: | chr12:30753627-30753794 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 1-171 |
| Cow position: | chr12:35771115-35770946 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 1-179 |
| Cow position: | chr12:3623598-3623777 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-161 |
| Cow position: | chr12:18943753-18943593 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 2-162 |
| Cow position: | chr12:13643138-13643297 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 2-170 |
| Cow position: | chr12:16056955-16056784 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-165 |
| Cow position: | chr12:46120924-46120763 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 3-166 |
| Cow position: | chr12:18103705-18103542 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 6-153 |
| Cow position: | chr12:30414039-30413888 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-162 |
| Cow position: | chr12:4162458-4162289 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 6-166 |
| Cow position: | chr12:15173733-15173893 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 6-170 |
| Cow position: | chr12:1889671-1889504 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 7-166 |
| Cow position: | chr12:45168111-45167950 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 147 |
| Conread position: | 9-151 |
| Cow position: | chr12:30999139-30999282 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 9-163 |
| Cow position: | chr12:33458057-33458214 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 9-172 |
| Cow position: | chr12:4134989-4135153 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 10-152 |
| Cow position: | chr12:6687804-6687949 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 10-159 |
| Cow position: | chr12:33323582-33323433 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 10-160 |
| Cow position: | chr12:18964014-18963864 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 10-163 |
| Cow position: | chr12:9914702-9914856 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 10-163 |
| Cow position: | chr12:28213428-28213576 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 10-163 |
| Cow position: | chr12:30438154-30438304 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 10-165 |
| Cow position: | chr12:17881774-17881930 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 10-166 |
| Cow position: | chr12:3197183-3197338 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 10-166 |
| Cow position: | chr12:3615913-3616067 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 10-166 |
| Cow position: | chr12:5635536-5635383 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 10-166 |
| Cow position: | chr12:21780077-21780232 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 10-166 |
| Cow position: | chr12:23916756-23916912 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 10-166 |
| Cow position: | chr12:26217913-26217754 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 10-166 |
| Cow position: | chr12:27563466-27563307 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 10-166 |
| Cow position: | chr12:27803140-27802980 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 10-166 |
| Cow position: | chr12:30805767-30805928 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 10-166 |
| Cow position: | chr12:41159503-41159657 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 10-166 |
| Cow position: | chr12:46333263-46333414 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 10-170 |
| Cow position: | chr12:31883257-31883410 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 10-173 |
| Cow position: | chr12:23574675-23574840 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 11-166 |
| Cow position: | chr12:5940256-5940411 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 11-166 |
| Cow position: | chr12:30210394-30210553 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 11-166 |
| Cow position: | chr12:41474001-41474159 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 12-163 |
| Cow position: | chr12:23446635-23446787 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 12-166 |
| Cow position: | chr12:3880066-3879910 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 13-166 |
| Cow position: | chr12:40158103-40157955 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 15-166 |
| Cow position: | chr12:17774713-17774864 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 16-166 |
| Cow position: | chr12:6241238-6241389 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 17-159 |
| Cow position: | chr12:11587692-11587837 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 18-166 |
| Cow position: | chr12:4866735-4866887 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 18-170 |
| Cow position: | chr12:18518593-18518747 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 18-179 |
| Cow position: | chr12:4719865-4720030 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 19-162 |
| Cow position: | chr12:45090427-45090286 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 20-166 |
| Cow position: | chr12:18766049-18765903 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 25-164 |
| Cow position: | chr12:36994188-36994048 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 25-166 |
| Cow position: | chr12:22515805-22515665 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 118 |
| Conread position: | 25-170 |
| Cow position: | chr12:23836258-23836403 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 26-166 |
| Cow position: | chr12:23855769-23855902 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 29-163 |
| Cow position: | chr12:41581046-41581177 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 29-166 |
| Cow position: | chr12:4793129-4793267 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 30-172 |
| Cow position: | chr12:7457610-7457469 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 32-166 |
| Cow position: | chr12:45002133-45001998 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 33-162 |
| Cow position: | chr12:29779978-29779848 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 36-163 |
| Cow position: | chr12:9229561-9229433 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-164 |
| Cow position: | chr12:4768865-4768993 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 36-166 |
| Cow position: | chr12:4797239-4797370 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-166 |
| Cow position: | chr12:6754135-6754266 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-166 |
| Cow position: | chr12:34161353-34161483 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 36-166 |
| Cow position: | chr12:37993793-37993662 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-166 |
| Cow position: | chr12:39663261-39663130 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 36-166 |
| Cow position: | chr12:45014618-45014752 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 36-166 |
| Cow position: | chr12:47804096-47804226 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 36-172 |
| Cow position: | chr12:3675588-3675453 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 36-201 |
| Cow position: | chr12:25110499-25110338 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 37-160 |
| Cow position: | chr12:44905572-44905691 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 37-163 |
| Cow position: | chr12:11836174-11836301 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 37-166 |
| Cow position: | chr12:7311320-7311451 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 37-166 |
| Cow position: | chr12:32419431-32419305 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 38-162 |
| Cow position: | chr12:24023861-24023736 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 40-165 |
| Cow position: | chr12:29057332-29057458 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 40-199 |
| Cow position: | chr12:43691473-43691320 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 121 |
| Conread position: | 41-166 |
| Cow position: | chr12:7920186-7920312 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 47-166 |
| Cow position: | chr12:25444864-25444984 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 51-167 |
| Cow position: | chr12:44028465-44028580 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 55-166 |
| Cow position: | chr12:3586076-3586188 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 56-166 |
| Cow position: | chr12:6226185-6226077 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 56-166 |
| Cow position: | chr12:23105896-23106007 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 56-166 |
| Cow position: | chr12:27572281-27572170 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 56-166 |
| Cow position: | chr12:42143119-42143229 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 56-166 |
| Cow position: | chr12:44542225-44542336 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 57-166 |
| Cow position: | chr12:47929161-47929270 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-166 |
| Cow position: | chr12:43854855-43854963 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 64-163 |
| Cow position: | chr12:27430473-27430573 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 68-163 |
| Cow position: | chr12:20355186-20355282 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.