Cow genome map

Conread name: rebs07c_e14.y1

Conread position: 1-138
Cow position: chr24:18999967-19000104 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 21

Conread position: 1-145
Cow position: chr24:30229389-30229536 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-151
Cow position: chr24:3160753-3160900 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 24

Conread position: 1-157
Cow position: chr24:11840107-11840262 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 35

Conread position: 1-158
Cow position: chr24:16895212-16895062 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 35

Conread position: 1-159
Cow position: chr24:28045669-28045836 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr24:28289331-28289176 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 29

Conread position: 1-160
Cow position: chr24:28553634-28553486 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 1-160
Cow position: chr24:37395291-37395133 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 24

Conread position: 1-162
Cow position: chr24:15373325-15373485 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 24

Conread position: 1-162
Cow position: chr24:43364277-43364438 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 103

Conread position: 1-163
Cow position: chr24:27418183-27418023 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 89

Conread position: 1-163
Cow position: chr24:29170887-29171042 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-163
Cow position: chr24:33944322-33944482 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 110, 5

Conread position: 1-165
Cow position: chr24:16118283-16118443 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 29

Conread position: 1-165
Cow position: chr24:19769406-19769573 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 1-165
Cow position: chr24:32054578-32054743 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 132

Conread position: 1-166
Cow position: chr24:2992960-2992798 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 35

Conread position: 1-166
Cow position: chr24:3493804-3493968 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 35

Conread position: 1-166
Cow position: chr24:6102743-6102911 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 101

Conread position: 1-166
Cow position: chr24:7777701-7777545 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 24

Conread position: 1-166
Cow position: chr24:15861682-15861510 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-166
Cow position: chr24:16268210-16268045 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 24

Conread position: 1-166
Cow position: chr24:16509889-16510061 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 26

Conread position: 1-166
Cow position: chr24:17752195-17752029 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 155

Conread position: 1-166
Cow position: chr24:17955523-17955361 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 26

Conread position: 1-166
Cow position: chr24:18614917-18615084 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 142

Conread position: 1-166
Cow position: chr24:24457331-24457167 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 26

Conread position: 1-166
Cow position: chr24:24755361-24755529 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 161

Conread position: 1-166
Cow position: chr24:27290787-27290955 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 1-166
Cow position: chr24:30484032-30483857 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 41

Conread position: 1-166
Cow position: chr24:32204876-32204711 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 56

Conread position: 1-166
Cow position: chr24:33465694-33465538 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1-166
Cow position: chr24:34742670-34742837 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 1-166
Cow position: chr24:35150440-35150602 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 31

Conread position: 1-166
Cow position: chr24:39911119-39910950 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 149

Conread position: 1-167
Cow position: chr24:18970589-18970423 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 82, 36

Conread position: 1-172
Cow position: chr24:41405815-41405984 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 25

Conread position: 10-153
Cow position: chr24:21894977-21895120 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 10-162
Cow position: chr24:39523520-39523369 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 102, 15

Conread position: 10-163
Cow position: chr24:28690612-28690765 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 36

Conread position: 10-163
Cow position: chr24:28699977-28700132 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 27

Conread position: 10-163
Cow position: chr24:32369991-32369834 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 29

Conread position: 10-164
Cow position: chr24:7046821-7046668 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 101, 28

Conread position: 10-164
Cow position: chr24:24662203-24662049 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 28

Conread position: 10-165
Cow position: chr24:25164960-25165117 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 10-165
Cow position: chr24:29595882-29595728 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 143

Conread position: 10-166
Cow position: chr24:26732379-26732533 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 26

Conread position: 10-166
Cow position: chr24:29606108-29605949 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 10-166
Cow position: chr24:29679382-29679229 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 103, 26

Conread position: 10-166
Cow position: chr24:31159548-31159699 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 26

Conread position: 10-166
Cow position: chr24:35576606-35576456 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 17

Conread position: 10-173
Cow position: chr24:40130054-40130220 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 11-160
Cow position: chr24:16895510-16895358 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 11-165
Cow position: chr24:34496046-34496205 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 11-166
Cow position: chr24:19736407-19736251 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 18

Conread position: 11-170
Cow position: chr24:19535326-19535168 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 25

Conread position: 11-171
Cow position: chr24:8886838-8886999 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 14

Conread position: 12-163
Cow position: chr24:18741641-18741491 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 18

Conread position: 12-166
Cow position: chr24:17104643-17104486 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 13-164
Cow position: chr24:11007388-11007538 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 78

Conread position: 14-159
Cow position: chr24:16089160-16089305 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 21

Conread position: 14-166
Cow position: chr24:27202020-27202172 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 67

Conread position: 15-163
Cow position: chr24:32070898-32071042 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 10

Conread position: 16-163
Cow position: chr24:34008642-34008492 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 16-166
Cow position: chr24:28042910-28043059 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 95, 20

Conread position: 17-161
Cow position: chr24:29586930-29587079 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 18-163
Cow position: chr24:18314005-18313852 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 8

Conread position: 20-166
Cow position: chr24:18331656-18331804 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 7

Conread position: 21-165
Cow position: chr24:3165756-3165901 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 27-170
Cow position: chr24:43832474-43832616 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 9

Conread position: 28-166
Cow position: chr24:20969716-20969580 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 83, 10

Conread position: 30-165
Cow position: chr24:34555982-34556117 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 112

Conread position: 36-159
Cow position: chr24:352653-352530 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 36-163
Cow position: chr24:20801393-20801265 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 36-166
Cow position: chr24:27844575-27844444 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 36-166
Cow position: chr24:28327126-28326997 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 50

Conread position: 36-166
Cow position: chr24:40404855-40404728 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 57

Conread position: 36-170
Cow position: chr24:28470727-28470592 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 36-171
Cow position: chr24:29673475-29673610 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 110

Conread position: 36-198
Cow position: chr24:29538558-29538396 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 133

Conread position: 37-163
Cow position: chr24:33098519-33098392 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 37-163
Cow position: chr24:42726404-42726531 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 39-163
Cow position: chr24:2095927-2095801 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 39-163
Cow position: chr24:15347545-15347670 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 118

Conread position: 42-166
Cow position: chr24:41412335-41412213 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 30

Conread position: 47-166
Cow position: chr24:32891080-32890960 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 53-166
Cow position: chr24:32818329-32818219 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 15

Conread position: 56-163
Cow position: chr24:14786352-14786460 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 65-166
Cow position: chr24:22235449-22235551 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 68-166
Cow position: chr24:27553080-27553178 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 62

Conread position: 75-170
Cow position: chr24:39218560-39218464 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.