Cow genome map
| Conread name: | rebs07c_e14.y1 |
| Conread position: | 1-151 |
| Cow position: | chr25:38425302-38425448 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 109, 38 |
| Conread position: | 1-159 |
| Cow position: | chr25:13569230-13569078 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 1-162 |
| Cow position: | chr25:6687887-6688047 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 1-162 |
| Cow position: | chr25:22751067-22750905 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 1-162 |
| Cow position: | chr25:26700972-26701127 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 1-162 |
| Cow position: | chr25:36120443-36120600 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 1-163 |
| Cow position: | chr25:1824157-1823994 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-163 |
| Cow position: | chr25:12252872-12252706 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 1-163 |
| Cow position: | chr25:12305216-12305379 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 1-163 |
| Cow position: | chr25:16064830-16064995 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-164 |
| Cow position: | chr25:21245663-21245501 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 1-164 |
| Cow position: | chr25:26089876-26089709 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 1-165 |
| Cow position: | chr25:13272507-13272674 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:433109-432942 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:1838178-1838347 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 1-166 |
| Cow position: | chr25:8157566-8157405 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 1-166 |
| Cow position: | chr25:10504398-10504235 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 1-166 |
| Cow position: | chr25:11585457-11585624 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 1-166 |
| Cow position: | chr25:13443473-13443304 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 1-166 |
| Cow position: | chr25:14196800-14196967 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 1-166 |
| Cow position: | chr25:14513052-14513221 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:17658548-17658717 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 1-166 |
| Cow position: | chr25:21894946-21894779 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:30816826-30816995 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:36555749-36555583 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 1-166 |
| Cow position: | chr25:36762045-36762211 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 1-169 |
| Cow position: | chr25:5920024-5920189 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 1-170 |
| Cow position: | chr25:11315846-11316011 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 1-172 |
| Cow position: | chr25:8961708-8961882 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 3-159 |
| Cow position: | chr25:20133370-20133216 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 6-162 |
| Cow position: | chr25:16921851-16921695 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 6-163 |
| Cow position: | chr25:23917789-23917944 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 6-166 |
| Cow position: | chr25:11956749-11956910 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 6-171 |
| Cow position: | chr25:18542004-18541835 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 9-166 |
| Cow position: | chr25:23245054-23244896 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 10-159 |
| Cow position: | chr25:38982052-38982192 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 10-161 |
| Cow position: | chr25:33256304-33256454 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 10-162 |
| Cow position: | chr25:9056130-9056280 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 10-162 |
| Cow position: | chr25:22730778-22730930 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 10-163 |
| Cow position: | chr25:20076442-20076600 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 10-165 |
| Cow position: | chr25:19478622-19478780 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 10-166 |
| Cow position: | chr25:7581475-7581321 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 10-166 |
| Cow position: | chr25:16867189-16867347 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 10-166 |
| Cow position: | chr25:20008083-20008239 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 10-166 |
| Cow position: | chr25:24862825-24862981 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 28 |
| Conread position: | 10-166 |
| Cow position: | chr25:30619013-30619169 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 101, 85 |
| Conread position: | 10-166 |
| Cow position: | chr25:33555557-33555711 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 10-167 |
| Cow position: | chr25:18905835-18905992 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 10-170 |
| Cow position: | chr25:21893285-21893448 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 10-170 |
| Cow position: | chr25:23817894-23817731 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 159 |
| Conread position: | 10-172 |
| Cow position: | chr25:36081826-36081987 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 10-173 |
| Cow position: | chr25:17474564-17474400 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 11-151 |
| Cow position: | chr25:9349330-9349193 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 11-166 |
| Cow position: | chr25:10643359-10643203 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 11-166 |
| Cow position: | chr25:17704694-17704850 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 11-166 |
| Cow position: | chr25:28187996-28187839 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 11-166 |
| Cow position: | chr25:34768784-34768628 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 20, 146 |
| Conread position: | 13-165 |
| Cow position: | chr25:35109313-35109164 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 13-166 |
| Cow position: | chr25:26087470-26087627 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 15-159 |
| Cow position: | chr25:12806997-12807137 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 26-166 |
| Cow position: | chr25:35090609-35090463 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 27-158 |
| Cow position: | chr25:40321322-40321190 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 27-163 |
| Cow position: | chr25:23779365-23779227 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 28-159 |
| Cow position: | chr25:10364366-10364238 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 29-164 |
| Cow position: | chr25:9990142-9990006 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 30-162 |
| Cow position: | chr25:9615806-9615939 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 30-162 |
| Cow position: | chr25:17918943-17919076 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 33-166 |
| Cow position: | chr25:36840368-36840502 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 87 |
| Conread position: | 36-162 |
| Cow position: | chr25:31762633-31762506 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-163 |
| Cow position: | chr25:26160940-26161072 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 36-166 |
| Cow position: | chr25:61625-61756 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 36-166 |
| Cow position: | chr25:6474112-6473981 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 36-166 |
| Cow position: | chr25:13503408-13503540 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 36-166 |
| Cow position: | chr25:30656671-30656543 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 57 |
| Conread position: | 36-170 |
| Cow position: | chr25:18288793-18288659 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 36-171 |
| Cow position: | chr25:9939281-9939150 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 37-154 |
| Cow position: | chr25:10359602-10359719 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 37-163 |
| Cow position: | chr25:34242128-34242001 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 37-170 |
| Cow position: | chr25:6258859-6258995 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 40-166 |
| Cow position: | chr25:15218115-15218238 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 41-164 |
| Cow position: | chr25:4221623-4221499 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 44-166 |
| Cow position: | chr25:7380856-7380733 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.