Cow genome map
| Conread name: | rebs07c_e14.y1 |
| Conread position: | 1-139 |
| Cow position: | chr26:10751786-10751925 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-143 |
| Cow position: | chr26:22603080-22602936 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-151 |
| Cow position: | chr26:6006097-6005947 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 1-161 |
| Cow position: | chr26:19459644-19459813 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-162 |
| Cow position: | chr26:613718-613552 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 1-162 |
| Cow position: | chr26:11263601-11263759 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 110, 28 |
| Conread position: | 1-162 |
| Cow position: | chr26:11538490-11538653 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 1-162 |
| Cow position: | chr26:31633688-31633849 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 1-163 |
| Cow position: | chr26:4807521-4807676 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 1-163 |
| Cow position: | chr26:7315145-7314986 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 1-163 |
| Cow position: | chr26:9604522-9604684 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 1-163 |
| Cow position: | chr26:32601311-32601472 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 1-165 |
| Cow position: | chr26:8700088-8699923 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-165 |
| Cow position: | chr26:21243061-21243219 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 1-166 |
| Cow position: | chr26:4585249-4585088 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:5246520-5246353 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:5985854-5985692 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 1-166 |
| Cow position: | chr26:9839580-9839424 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 1-166 |
| Cow position: | chr26:14905852-14905683 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:15200556-15200391 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 1-166 |
| Cow position: | chr26:19774342-19774174 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:22249518-22249358 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 1-166 |
| Cow position: | chr26:26466769-26466607 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 88 |
| Conread position: | 1-166 |
| Cow position: | chr26:33011708-33011545 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:33744863-33745024 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 1-170 |
| Cow position: | chr26:16921898-16922066 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-170 |
| Cow position: | chr26:22354373-22354543 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 1-171 |
| Cow position: | chr26:10965634-10965463 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 1-172 |
| Cow position: | chr26:25393990-25394170 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-163 |
| Cow position: | chr26:25526207-25526371 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-166 |
| Cow position: | chr26:12155158-12154998 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 2-166 |
| Cow position: | chr26:32836201-32836364 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 3-166 |
| Cow position: | chr26:26294235-26294071 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 6-159 |
| Cow position: | chr26:17187069-17186920 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 8-163 |
| Cow position: | chr26:32571262-32571415 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 9-171 |
| Cow position: | chr26:12238063-12237899 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 10-162 |
| Cow position: | chr26:22152194-22152348 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-163 |
| Cow position: | chr26:9104313-9104159 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 10-163 |
| Cow position: | chr26:32834606-32834457 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 10-166 |
| Cow position: | chr26:829771-829930 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-166 |
| Cow position: | chr26:4854507-4854669 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 10-166 |
| Cow position: | chr26:6794115-6794275 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 10-166 |
| Cow position: | chr26:11370880-11371033 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 10-166 |
| Cow position: | chr26:17057649-17057804 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 10-166 |
| Cow position: | chr26:22349045-22348887 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 10-166 |
| Cow position: | chr26:23624078-23623920 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 150 |
| Conread position: | 10-166 |
| Cow position: | chr26:25074686-25074842 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 10-166 |
| Cow position: | chr26:30254661-30254509 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 10-166 |
| Cow position: | chr26:33253351-33253191 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 10-170 |
| Cow position: | chr26:4167385-4167225 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 129 |
| Conread position: | 10-170 |
| Cow position: | chr26:32776539-32776383 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 10-171 |
| Cow position: | chr26:13818391-13818553 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 28 |
| Conread position: | 11-165 |
| Cow position: | chr26:8642914-8643065 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 11-166 |
| Cow position: | chr26:3706764-3706916 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 11-166 |
| Cow position: | chr26:12893456-12893303 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 11-166 |
| Cow position: | chr26:24453937-24453785 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 14-166 |
| Cow position: | chr26:34060306-34060458 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 14-170 |
| Cow position: | chr26:34580775-34580930 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 15-166 |
| Cow position: | chr26:14578300-14578445 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 96, 105 |
| Conread position: | 16-166 |
| Cow position: | chr26:2739485-2739330 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 19-166 |
| Cow position: | chr26:6865002-6865149 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 25-166 |
| Cow position: | chr26:18876980-18876837 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 27-166 |
| Cow position: | chr26:16435671-16435531 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 28-163 |
| Cow position: | chr26:6714315-6714180 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 29-173 |
| Cow position: | chr26:29889525-29889382 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 30-163 |
| Cow position: | chr26:178220-178356 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 30-166 |
| Cow position: | chr26:28374457-28374318 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 32-163 |
| Cow position: | chr26:1325747-1325879 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 34-166 |
| Cow position: | chr26:18381306-18381438 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 36-146 |
| Cow position: | chr26:10938966-10939077 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-165 |
| Cow position: | chr26:677986-677856 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-166 |
| Cow position: | chr26:8352963-8353094 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 36-166 |
| Cow position: | chr26:16594505-16594377 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 36-170 |
| Cow position: | chr26:32655615-32655479 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 37-166 |
| Cow position: | chr26:29664164-29664032 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 38-166 |
| Cow position: | chr26:15211799-15211928 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 38-166 |
| Cow position: | chr26:19671474-19671599 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 38-166 |
| Cow position: | chr26:32353724-32353595 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 48-170 |
| Cow position: | chr26:16796200-16796081 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 54-166 |
| Cow position: | chr26:11884315-11884424 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 65-201 |
| Cow position: | chr26:7254984-7254850 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 38 |
Show alignments to all cow chromosomes.