Cow genome map

Conread name: rebs07c_e14.y1

Conread position: 1-143
Cow position: chr27:4858624-4858768 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 1-151
Cow position: chr27:30868726-30868877 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 24

Conread position: 1-158
Cow position: chr27:715516-715357 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 10

Conread position: 1-159
Cow position: chr27:21453078-21453239 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 1-162
Cow position: chr27:29831684-29831845 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 26

Conread position: 1-163
Cow position: chr27:4156016-4155850 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 147

Conread position: 1-163
Cow position: chr27:10653700-10653536 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 17

Conread position: 1-163
Cow position: chr27:15925355-15925197 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 24

Conread position: 1-163
Cow position: chr27:16088823-16088656 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 154

Conread position: 1-163
Cow position: chr27:26111897-26112064 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 5

Conread position: 1-164
Cow position: chr27:18922816-18922982 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 101

Conread position: 1-164
Cow position: chr27:30354329-30354494 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 1-165
Cow position: chr27:6302448-6302618 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 120

Conread position: 1-166
Cow position: chr27:2592562-2592390 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 1-166
Cow position: chr27:3306784-3306623 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 26

Conread position: 1-166
Cow position: chr27:4386047-4386213 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1-166
Cow position: chr27:7974188-7974025 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 59

Conread position: 1-166
Cow position: chr27:11561790-11561624 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 26

Conread position: 1-166
Cow position: chr27:15865625-15865455 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 1-166
Cow position: chr27:16705266-16705099 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 41

Conread position: 1-166
Cow position: chr27:19660949-19660780 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 1-166
Cow position: chr27:20901583-20901409 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 35

Conread position: 1-166
Cow position: chr27:22225582-22225744 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 110, 5

Conread position: 1-166
Cow position: chr27:22423524-22423364 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 32

Conread position: 1-166
Cow position: chr27:25152096-25151942 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 110, 24

Conread position: 1-166
Cow position: chr27:25277155-25276991 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 97

Conread position: 1-166
Cow position: chr27:26413239-26413406 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-166
Cow position: chr27:28260523-28260687 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 22

Conread position: 1-166
Cow position: chr27:29380870-29380703 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 91

Conread position: 1-166
Cow position: chr27:30915021-30914858 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 110, 32

Conread position: 1-166
Cow position: chr27:31148775-31148610 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 26

Conread position: 1-170
Cow position: chr27:8263321-8263492 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 154

Conread position: 1-170
Cow position: chr27:27038824-27038993 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 91

Conread position: 1-170
Cow position: chr27:27064425-27064594 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 165

Conread position: 1-170
Cow position: chr27:27270524-27270698 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 59

Conread position: 1-170
Cow position: chr27:30359422-30359251 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 1-171
Cow position: chr27:18558373-18558204 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 95

Conread position: 1-171
Cow position: chr27:24371253-24371086 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 36

Conread position: 1-173
Cow position: chr27:17918301-17918472 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 110, 24

Conread position: 2-163
Cow position: chr27:11435309-11435469 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 135

Conread position: 2-166
Cow position: chr27:20497224-20497054 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 2-170
Cow position: chr27:26188842-26188674 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 9

Conread position: 2-170
Cow position: chr27:30804678-30804511 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 89

Conread position: 3-166
Cow position: chr27:7935146-7935309 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 21

Conread position: 6-170
Cow position: chr27:26919894-26920068 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 7-162
Cow position: chr27:14303742-14303590 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 104, 18

Conread position: 9-166
Cow position: chr27:13940550-13940709 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 9-170
Cow position: chr27:8062346-8062505 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 21

Conread position: 10-145
Cow position: chr27:21976056-21975922 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 27

Conread position: 10-161
Cow position: chr27:18507653-18507503 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 15

Conread position: 10-164
Cow position: chr27:1768615-1768773 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 50

Conread position: 10-164
Cow position: chr27:22418762-22418916 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 14

Conread position: 10-165
Cow position: chr27:17646162-17646319 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 10-165
Cow position: chr27:18593274-18593122 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 77

Conread position: 10-165
Cow position: chr27:23890944-23890787 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 10-166
Cow position: chr27:426975-426818 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 85

Conread position: 10-166
Cow position: chr27:1636930-1637087 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 24

Conread position: 10-166
Cow position: chr27:1789131-1789290 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 59

Conread position: 10-166
Cow position: chr27:19543913-19544072 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 10-166
Cow position: chr27:19546506-19546663 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 100

Conread position: 10-166
Cow position: chr27:20514826-20514671 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 81

Conread position: 10-166
Cow position: chr27:20812911-20812753 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 10-166
Cow position: chr27:22559819-22559975 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 82

Conread position: 10-170
Cow position: chr27:1290845-1291005 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 148

Conread position: 10-170
Cow position: chr27:27673016-27673171 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 14

Conread position: 10-172
Cow position: chr27:31017828-31017983 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 15

Conread position: 11-159
Cow position: chr27:25809517-25809660 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 25

Conread position: 11-162
Cow position: chr27:15643175-15643027 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 14

Conread position: 11-163
Cow position: chr27:19589479-19589324 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 55

Conread position: 11-166
Cow position: chr27:20584453-20584605 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 26

Conread position: 11-166
Cow position: chr27:22454774-22454928 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 16

Conread position: 11-166
Cow position: chr27:23545319-23545482 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 12-166
Cow position: chr27:6541632-6541480 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 35

Conread position: 12-166
Cow position: chr27:24477419-24477265 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 13

Conread position: 16-166
Cow position: chr27:10992351-10992205 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 20

Conread position: 16-166
Cow position: chr27:12246652-12246502 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 18

Conread position: 16-166
Cow position: chr27:20749015-20749162 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 18

Conread position: 18-162
Cow position: chr27:6241196-6241340 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 20

Conread position: 18-166
Cow position: chr27:212954-212804 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 55

Conread position: 19-166
Cow position: chr27:27641016-27641162 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 25-166
Cow position: chr27:31386641-31386783 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 5

Conread position: 27-161
Cow position: chr27:7731269-7731404 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 28-162
Cow position: chr27:12191492-12191626 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 29

Conread position: 28-166
Cow position: chr27:30765019-30764884 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 97

Conread position: 30-172
Cow position: chr27:18435149-18435291 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 8

Conread position: 33-166
Cow position: chr27:30908654-30908521 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 87

Conread position: 36-162
Cow position: chr27:22245605-22245480 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 36-166
Cow position: chr27:2847833-2847703 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 112

Conread position: 36-166
Cow position: chr27:8790762-8790895 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 36-166
Cow position: chr27:29319390-29319260 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 75, 126

Conread position: 36-166
Cow position: chr27:29388651-29388519 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 36-170
Cow position: chr27:21393527-21393663 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 38-166
Cow position: chr27:22654898-22654771 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 30

Conread position: 42-162
Cow position: chr27:4944541-4944662 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 42-166
Cow position: chr27:30489437-30489562 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 48-166
Cow position: chr27:19452969-19452850 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 58-166
Cow position: chr27:27255945-27255836 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 59-173
Cow position: chr27:17918761-17918876 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 68-166
Cow position: chr27:29658768-29658865 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 61

Show alignments to all cow chromosomes.