Cow genome map

Conread name: rebs23c_e11.y1

Conread position: 164-626
Cow position:
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 47

Conread position: 170-626
Cow position:
Alignm length: 469
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 97

Conread position: 171-539
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 294

Conread position: 171-558
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 169

Conread position: 171-605
Cow position:
Alignm length: 451
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 40

Conread position: 171-616
Cow position:
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 22

Conread position: 171-617
Cow position:
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 126

Conread position: 171-618
Cow position:
Alignm length: 451
Alignm identity: 298
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 218, 74

Conread position: 171-623
Cow position:
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 171-625
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 171-627
Cow position:
Alignm length: 466
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 358

Conread position: 171-627
Cow position:
Alignm length: 462
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 167

Conread position: 171-628
Cow position:
Alignm length: 466
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 152

Conread position: 171-629
Cow position:
Alignm length: 466
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 215

Conread position: 171-629
Cow position:
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 167

Conread position: 171-630
Cow position:
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 26

Conread position: 171-642
Cow position:
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 171-644
Cow position:
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 170

Conread position: 172-578
Cow position:
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 93

Conread position: 172-630
Cow position:
Alignm length: 471
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 172-631
Cow position:
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 103

Conread position: 173-510
Cow position:
Alignm length: 342
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 231, 60

Conread position: 173-536
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 216, 38

Conread position: 173-568
Cow position:
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 80

Conread position: 173-578
Cow position:
Alignm length: 410
Alignm identity: 276
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 244, 20

Conread position: 175-591
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 238

Conread position: 175-621
Cow position:
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 61

Conread position: 191-633
Cow position:
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 390

Conread position: 195-591
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 155

Conread position: 197-627
Cow position:
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 13

Conread position: 197-644
Cow position:
Alignm length: 458
Alignm identity: 312
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 63

Conread position: 213-629
Cow position:
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 44

Conread position: 215-556
Cow position:
Alignm length: 343
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 251, 9

Conread position: 215-621
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 136

Conread position: 218-558
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 162, 118

Conread position: 218-562
Cow position:
Alignm length: 351
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 46, 24

Conread position: 218-627
Cow position:
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 109

Conread position: 219-558
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 161, 5

Conread position: 219-568
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 115

Conread position: 222-558
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 157, 146

Conread position: 223-556
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 248

Conread position: 224-578
Cow position:
Alignm length: 363
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 343

Conread position: 224-623
Cow position:
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 242

Conread position: 225-575
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 252

Conread position: 225-616
Cow position:
Alignm length: 404
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 166, 57

Conread position: 225-621
Cow position:
Alignm length: 407
Alignm identity: 270
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 162, 93

Conread position: 227-574
Cow position:
Alignm length: 354
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 57

Conread position: 227-627
Cow position:
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 233

Conread position: 227-627
Cow position:
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 91

Conread position: 227-629
Cow position:
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 28

Conread position: 228-573
Cow position:
Alignm length: 352
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 110

Conread position: 229-630
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 33

Conread position: 233-632
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 73

Conread position: 234-557
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 146, 98

Conread position: 234-580
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 342

Conread position: 235-568
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 92

Conread position: 236-632
Cow position:
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 296

Conread position: 237-515
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 94

Conread position: 237-558
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 39

Conread position: 239-608
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 93

Conread position: 240-630
Cow position:
Alignm length: 398
Alignm identity: 255
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 158

Conread position: 247-633
Cow position:
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 70

Conread position: 253-511
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 58

Conread position: 254-574
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 164, 100

Conread position: 254-633
Cow position:
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 81

Conread position: 257-607
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 161, 61

Conread position: 257-616
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 149, 69

Conread position: 257-627
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 93

Conread position: 257-630
Cow position:
Alignm length: 392
Alignm identity: 261
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 80

Conread position: 259-627
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 229

Conread position: 260-610
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 213

Conread position: 265-623
Cow position:
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 66

Conread position: 267-627
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 78

Conread position: 267-631
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 151

Conread position: 270-492
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 117, 64

Conread position: 271-632
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 69

Conread position: 273-562
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 118, 7

Conread position: 276-620
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 294

Conread position: 277-621
Cow position:
Alignm length: 355
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 141, 335

Conread position: 277-629
Cow position:
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 186

Conread position: 277-630
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 79

Conread position: 277-633
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 127, 41

Conread position: 280-530
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 109, 76

Conread position: 288-515
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 46

Conread position: 292-627
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 133

Conread position: 293-579
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 94, 77

Conread position: 296-558
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 299-558
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 40

Conread position: 301-567
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 110, 47

Conread position: 310-556
Cow position:
Alignm length: 248
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 153, 73

Conread position: 315-630
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 162

Conread position: 325-631
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 132

Conread position: 327-612
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 99, 282

Conread position: 334-632
Cow position:
Alignm length: 305
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 22

Conread position: 339-619
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 125

Conread position: 340-568
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 341-626
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 127

Conread position: 344-633
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 120

Conread position: 347-633
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 124

Conread position: 389-634
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 127

Conread position: 428-624
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 428-628
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 183

Conread position: 428-644
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 176

Conread position: 431-608
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 39

Conread position: 440-633
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 449-630
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 456-619
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 457-630
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 12

Conread position: 470-644
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 114, 0

Show alignments to all cow chromosomes.