Cow genome map

Conread name: rebs23c_e11.y1

Conread position: 168-633
Cow position: chr16:13611777-13611316 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 170-578
Cow position: chr16:22919170-22919553 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 96

Conread position: 170-619
Cow position: chr16:13989664-13990100 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 102

Conread position: 170-633
Cow position: chr16:18354270-18353816 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 41

Conread position: 171-508
Cow position: chr16:4144739-4145082 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 92

Conread position: 171-514
Cow position: chr16:42092694-42092366 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 40

Conread position: 171-524
Cow position: chr16:24147837-24148193 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 39

Conread position: 171-530
Cow position: chr16:54287554-54287904 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 88

Conread position: 171-557
Cow position: chr16:54298159-54298533 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 209, 142

Conread position: 171-558
Cow position: chr16:4626715-4626325 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 86

Conread position: 171-558
Cow position: chr16:32586881-32587270 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 211, 40

Conread position: 171-558
Cow position: chr16:39646239-39646611 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 86

Conread position: 171-578
Cow position: chr16:31122575-31122164 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 241

Conread position: 171-578
Cow position: chr16:39474459-39474066 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 134

Conread position: 171-591
Cow position: chr16:52835194-52834789 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 36

Conread position: 171-591
Cow position: chr16:56231502-56231926 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 273

Conread position: 171-615
Cow position: chr16:29655007-29655446 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 24

Conread position: 171-621
Cow position: chr16:48096083-48095635 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 30

Conread position: 171-621
Cow position: chr16:49126504-49126058 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 86

Conread position: 171-622
Cow position: chr16:23472422-23472877 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 308
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 169

Conread position: 171-624
Cow position: chr16:48087191-48086740 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 213, 91

Conread position: 171-625
Cow position: chr16:46752600-46752141 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 250

Conread position: 171-627
Cow position: chr16:23730257-23729784 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 95

Conread position: 171-627
Cow position: chr16:25170072-25170527 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 40

Conread position: 171-627
Cow position: chr16:38709140-38708702 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 40

Conread position: 171-627
Cow position: chr16:48341010-48340562 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 52

Conread position: 171-627
Cow position: chr16:48956485-48956932 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 40

Conread position: 171-629
Cow position: chr16:33226852-33226404 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 13

Conread position: 171-629
Cow position: chr16:50906148-50906612 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 116

Conread position: 171-630
Cow position: chr16:4857414-4856966 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 171-630
Cow position: chr16:7665306-7665773 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 91

Conread position: 171-630
Cow position: chr16:11790680-11791142 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 268

Conread position: 171-630
Cow position: chr16:18141647-18141193 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 40

Conread position: 171-630
Cow position: chr16:23563821-23564270 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 40

Conread position: 171-630
Cow position: chr16:41590467-41590909 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 315
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 209, 15

Conread position: 171-630
Cow position: chr16:45139347-45139799 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 88

Conread position: 171-631
Cow position: chr16:21450533-21450984 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 40

Conread position: 171-639
Cow position: chr16:17142615-17143076 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 79

Conread position: 171-644
Cow position: chr16:7702213-7702667 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 172-558
Cow position: chr16:675182-675556 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 172-578
Cow position: chr16:11105231-11105640 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 40

Conread position: 172-639
Cow position: chr16:18758159-18757696 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 7

Conread position: 173-568
Cow position: chr16:45731691-45731311 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 100

Conread position: 173-608
Cow position: chr16:42339886-42340312 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 173-629
Cow position: chr16:12633591-12634019 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 307
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 216, 29

Conread position: 173-638
Cow position: chr16:52169760-52170198 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 37

Conread position: 174-623
Cow position: chr16:1549192-1548747 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 71

Conread position: 175-633
Cow position: chr16:4059050-4059494 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 47

Conread position: 176-625
Cow position: chr16:819939-820385 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 33

Conread position: 178-601
Cow position: chr16:48398557-48398145 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 47

Conread position: 178-630
Cow position: chr16:40561912-40562367 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 421

Conread position: 179-625
Cow position: chr16:7504787-7505215 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 83

Conread position: 181-562
Cow position: chr16:5725169-5725537 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 259, 30

Conread position: 187-625
Cow position: chr16:33704504-33704937 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 37

Conread position: 188-597
Cow position: chr16:53627724-53627323 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 23

Conread position: 188-632
Cow position: chr16:9973806-9973359 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 291

Conread position: 189-616
Cow position: chr16:48494856-48494432 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 22

Conread position: 190-623
Cow position: chr16:19003819-19003403 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 20

Conread position: 190-638
Cow position: chr16:27701547-27701118 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 169

Conread position: 193-625
Cow position: chr16:33645715-33646149 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 154

Conread position: 199-625
Cow position: chr16:13689371-13689797 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 8

Conread position: 208-620
Cow position: chr16:26373236-26372828 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 129

Conread position: 212-630
Cow position: chr16:47820291-47820706 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 135

Conread position: 212-644
Cow position: chr16:14106366-14106787 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 215-633
Cow position: chr16:8367101-8366692 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 9

Conread position: 216-605
Cow position: chr16:3246468-3246092 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 171, 41

Conread position: 216-644
Cow position: chr16:15960570-15960136 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 41

Conread position: 218-558
Cow position: chr16:17745560-17745902 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 218-606
Cow position: chr16:37670002-37669623 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 53

Conread position: 218-634
Cow position: chr16:46552548-46552934 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 280
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 382, 7

Conread position: 222-632
Cow position: chr16:50688256-50688659 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 44

Conread position: 223-633
Cow position: chr16:29608249-29608648 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 133

Conread position: 224-558
Cow position: chr16:44744400-44744067 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 147, 90

Conread position: 224-597
Cow position: chr16:8315441-8315089 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 224-635
Cow position: chr16:5363621-5364042 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 366

Conread position: 225-621
Cow position: chr16:47518582-47518973 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 105

Conread position: 225-629
Cow position: chr16:16548348-16548744 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 35

Conread position: 230-556
Cow position: chr16:24023561-24023233 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 150, 221

Conread position: 230-627
Cow position: chr16:45813954-45813566 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 18

Conread position: 232-621
Cow position: chr16:54665071-54664672 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 145

Conread position: 232-632
Cow position: chr16:16597302-16597690 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 233-633
Cow position: chr16:20025185-20025583 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 82

Conread position: 234-539
Cow position: chr16:42777705-42778011 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 253

Conread position: 234-558
Cow position: chr16:35195868-35195547 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 23

Conread position: 236-569
Cow position: chr16:50873430-50873093 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 26

Conread position: 236-624
Cow position: chr16:26649889-26649499 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 21

Conread position: 237-562
Cow position: chr16:13752378-13752062 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 237-621
Cow position: chr16:238006-238396 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 238

Conread position: 237-627
Cow position: chr16:11615483-11615109 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 89

Conread position: 241-583
Cow position: chr16:11008093-11008435 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 241-616
Cow position: chr16:48492935-48493303 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 176, 25

Conread position: 245-556
Cow position: chr16:689134-689439 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 135, 68

Conread position: 245-625
Cow position: chr16:11806435-11806803 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 12

Conread position: 252-530
Cow position: chr16:35168485-35168768 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 252-557
Cow position: chr16:10148041-10148347 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 127, 74

Conread position: 253-575
Cow position: chr16:36203854-36203535 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 109

Conread position: 253-630
Cow position: chr16:56082599-56082229 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 162, 83

Conread position: 254-557
Cow position: chr16:39695715-39695418 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 130, 162

Conread position: 255-608
Cow position: chr16:30037231-30036875 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 25

Conread position: 256-558
Cow position: chr16:13233181-13232883 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 148, 80

Conread position: 256-626
Cow position: chr16:25839381-25839752 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 43

Conread position: 256-629
Cow position: chr16:32781126-32781502 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 279

Conread position: 257-530
Cow position: chr16:1725308-1725035 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 154, 66

Conread position: 257-634
Cow position: chr16:11422075-11422440 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 266-556
Cow position: chr16:14124931-14125202 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 267-526
Cow position: chr16:27249184-27249438 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 68

Conread position: 267-629
Cow position: chr16:50288932-50289285 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 92, 63

Conread position: 267-633
Cow position: chr16:43105738-43105374 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 69

Conread position: 268-621
Cow position: chr16:22772744-22773107 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 347

Conread position: 273-556
Cow position: chr16:56787996-56787712 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 17

Conread position: 273-578
Cow position: chr16:8323205-8322896 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 273-630
Cow position: chr16:42443935-42444293 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 7

Conread position: 273-644
Cow position: chr16:10032409-10032784 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 254
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 54

Conread position: 277-629
Cow position: chr16:7582497-7582851 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 148

Conread position: 280-578
Cow position: chr16:12060201-12060502 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 198

Conread position: 286-629
Cow position: chr16:11957790-11957444 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 40

Conread position: 291-627
Cow position: chr16:45677774-45678112 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 108

Conread position: 292-551
Cow position: chr16:39237743-39238005 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 108, 0

Conread position: 292-617
Cow position: chr16:45554238-45554566 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 34

Conread position: 293-628
Cow position: chr16:17626731-17627063 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 89, 41

Conread position: 294-578
Cow position: chr16:10352669-10352968 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 294-632
Cow position: chr16:41697289-41696952 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 75

Conread position: 295-631
Cow position: chr16:425012-424675 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 74

Conread position: 300-630
Cow position: chr16:20205260-20205597 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 157

Conread position: 301-558
Cow position: chr16:54083843-54084102 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 33

Conread position: 301-630
Cow position: chr16:592007-591671 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 146

Conread position: 309-616
Cow position: chr16:17288758-17289072 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 25

Conread position: 321-627
Cow position: chr16:46433499-46433191 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 5, 15

Conread position: 324-616
Cow position: chr16:689540-689826 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 137, 18

Conread position: 324-630
Cow position: chr16:52133687-52133382 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 135

Conread position: 324-632
Cow position: chr16:3303862-3304163 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 325-634
Cow position: chr16:7549797-7550106 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 91, 236

Conread position: 326-616
Cow position: chr16:20069658-20069954 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 49

Conread position: 334-607
Cow position: chr16:27723054-27723339 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 82, 16

Conread position: 334-633
Cow position: chr16:35296911-35297217 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 82

Conread position: 336-630
Cow position: chr16:17945362-17945659 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 45

Conread position: 339-644
Cow position: chr16:33198591-33198287 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 125, 173

Conread position: 344-625
Cow position: chr16:47964967-47964688 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 110

Conread position: 358-638
Cow position: chr16:41578088-41578371 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 125

Conread position: 358-644
Cow position: chr16:9904955-9905239 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 27

Conread position: 359-629
Cow position: chr16:19047575-19047299 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 235

Conread position: 370-629
Cow position: chr16:23955952-23955693 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 36

Conread position: 378-612
Cow position: chr16:22206958-22207195 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 175

Conread position: 387-625
Cow position: chr16:19052527-19052766 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 65

Conread position: 387-644
Cow position: chr16:45121930-45122185 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 57

Conread position: 389-625
Cow position: chr16:17903756-17903512 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 394-633
Cow position: chr16:21039926-21040169 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 38

Conread position: 400-621
Cow position: chr16:34220090-34220315 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 408-644
Cow position: chr16:53792902-53792663 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 53

Conread position: 409-578
Cow position: chr16:17135142-17134974 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 18

Conread position: 409-633
Cow position: chr16:3114455-3114680 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 411-625
Cow position: chr16:29527743-29527959 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 174

Conread position: 414-622
Cow position: chr16:9552983-9553187 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 415-627
Cow position: chr16:30305891-30305681 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 118

Conread position: 415-632
Cow position: chr16:40700805-40700599 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 423-616
Cow position: chr16:42977394-42977588 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 174

Conread position: 425-627
Cow position: chr16:45294476-45294682 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 51

Conread position: 428-563
Cow position: chr16:50370532-50370665 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 34, 0

Conread position: 428-627
Cow position: chr16:11135046-11134851 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 41

Conread position: 429-630
Cow position: chr16:11584460-11584269 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 31

Conread position: 442-630
Cow position: chr16:15953872-15953683 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 142

Conread position: 445-633
Cow position: chr16:12010047-12010234 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 147

Conread position: 453-625
Cow position: chr16:17292061-17291890 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 456-630
Cow position: chr16:17460131-17460299 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 125

Conread position: 457-624
Cow position: chr16:33235195-33235032 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 463-644
Cow position: chr16:21370216-21370042 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 474-644
Cow position: chr16:24142976-24142807 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.