Cow genome map

Conread name: rebs23c_e11.y1

Conread position: 164-629
Cow position:
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 22

Conread position: 167-625
Cow position:
Alignm length: 469
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 148

Conread position: 170-529
Cow position:
Alignm length: 361
Alignm identity: 235
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 264, 18

Conread position: 170-578
Cow position:
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 171-557
Cow position:
Alignm length: 390
Alignm identity: 259
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 224, 26

Conread position: 171-558
Cow position:
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 41

Conread position: 171-558
Cow position:
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 274

Conread position: 171-558
Cow position:
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 295

Conread position: 171-558
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 219, 62

Conread position: 171-559
Cow position:
Alignm length: 394
Alignm identity: 254
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 95, 52

Conread position: 171-574
Cow position:
Alignm length: 408
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 290

Conread position: 171-578
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 171-578
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 163

Conread position: 171-621
Cow position:
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 57

Conread position: 171-624
Cow position:
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 128

Conread position: 171-626
Cow position:
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 155

Conread position: 171-627
Cow position:
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 120

Conread position: 171-628
Cow position:
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 171-629
Cow position:
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 112

Conread position: 171-630
Cow position:
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 126

Conread position: 171-631
Cow position:
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 15

Conread position: 171-633
Cow position:
Alignm length: 475
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 410

Conread position: 171-638
Cow position:
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 139

Conread position: 172-518
Cow position:
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 49

Conread position: 172-522
Cow position:
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 172-605
Cow position:
Alignm length: 440
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 290

Conread position: 172-617
Cow position:
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 10

Conread position: 172-621
Cow position:
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 91

Conread position: 172-626
Cow position:
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 173-629
Cow position:
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 175

Conread position: 174-614
Cow position:
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 135

Conread position: 176-512
Cow position:
Alignm length: 344
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 176-573
Cow position:
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 35

Conread position: 179-516
Cow position:
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 30

Conread position: 179-573
Cow position:
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 85

Conread position: 180-530
Cow position:
Alignm length: 352
Alignm identity: 257
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 103, 35

Conread position: 180-630
Cow position:
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 31

Conread position: 180-631
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 18

Conread position: 180-635
Cow position:
Alignm length: 472
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 147

Conread position: 187-558
Cow position:
Alignm length: 374
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 61

Conread position: 190-627
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 152

Conread position: 192-630
Cow position:
Alignm length: 443
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 392

Conread position: 195-620
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 272

Conread position: 198-558
Cow position:
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 271

Conread position: 212-557
Cow position:
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 246

Conread position: 215-563
Cow position:
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 215-578
Cow position:
Alignm length: 369
Alignm identity: 248
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 183, 9

Conread position: 215-621
Cow position:
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 9

Conread position: 216-558
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 191, 102

Conread position: 216-632
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 8

Conread position: 224-616
Cow position:
Alignm length: 400
Alignm identity: 260
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 192, 33

Conread position: 224-632
Cow position:
Alignm length: 420
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 110

Conread position: 225-612
Cow position:
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 142

Conread position: 225-614
Cow position:
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 123

Conread position: 225-619
Cow position:
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 32

Conread position: 225-621
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 164, 32

Conread position: 225-630
Cow position:
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 32

Conread position: 227-525
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 228-638
Cow position:
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 80

Conread position: 229-530
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 38

Conread position: 229-558
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 95

Conread position: 230-638
Cow position:
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 106

Conread position: 230-638
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 232-557
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 157, 205

Conread position: 232-621
Cow position:
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 102

Conread position: 232-644
Cow position:
Alignm length: 417
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 167

Conread position: 233-568
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 28

Conread position: 233-639
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 234-563
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 103

Conread position: 235-630
Cow position:
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 19

Conread position: 236-623
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 98

Conread position: 237-622
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 238-629
Cow position:
Alignm length: 399
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 83

Conread position: 239-623
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 18

Conread position: 242-622
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 67

Conread position: 243-627
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 243-630
Cow position:
Alignm length: 393
Alignm identity: 257
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 38

Conread position: 243-633
Cow position:
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 84

Conread position: 244-597
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 76

Conread position: 246-558
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 143, 157

Conread position: 247-591
Cow position:
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 93

Conread position: 250-621
Cow position:
Alignm length: 375
Alignm identity: 255
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 171, 20

Conread position: 250-630
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 43

Conread position: 255-624
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 257-626
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 40

Conread position: 258-623
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 182

Conread position: 261-558
Cow position:
Alignm length: 302
Alignm identity: 197
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 119, 9

Conread position: 277-578
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 153, 35

Conread position: 280-625
Cow position:
Alignm length: 347
Alignm identity: 229
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 186, 43

Conread position: 281-615
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 33

Conread position: 282-558
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 52

Conread position: 284-627
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 18

Conread position: 286-621
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 287-572
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 55

Conread position: 288-638
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 130, 11

Conread position: 290-558
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 100, 164

Conread position: 292-627
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 285

Conread position: 300-568
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 118, 0

Conread position: 300-631
Cow position:
Alignm length: 353
Alignm identity: 229
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 307

Conread position: 309-627
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 109, 7

Conread position: 310-558
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 29

Conread position: 315-643
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 91

Conread position: 321-619
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 5, 28

Conread position: 325-626
Cow position:
Alignm length: 305
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 88

Conread position: 337-619
Cow position:
Alignm length: 288
Alignm identity: 209
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 23

Conread position: 340-558
Cow position:
Alignm length: 224
Alignm identity: 149
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 116

Conread position: 340-619
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 67, 47

Conread position: 344-626
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 14

Conread position: 348-568
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 112, 22

Conread position: 351-633
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 351-633
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 246

Conread position: 352-639
Cow position:
Alignm length: 295
Alignm identity: 195
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 111

Conread position: 354-638
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 371-577
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 44

Conread position: 376-627
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 377-638
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 82

Conread position: 382-639
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 49

Conread position: 397-530
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 398-627
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 15

Conread position: 401-591
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 404-578
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 9

Conread position: 404-625
Cow position:
Alignm length: 224
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 9

Conread position: 404-626
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 61, 9

Conread position: 409-618
Cow position:
Alignm length: 210
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 409-629
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 201, 31

Conread position: 414-578
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 414-644
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 157

Conread position: 415-619
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 415-623
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 108, 71

Conread position: 416-625
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 24

Conread position: 416-625
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 24

Conread position: 416-644
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 188

Conread position: 424-609
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 16

Conread position: 428-619
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 428-621
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 144

Conread position: 430-629
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 94

Conread position: 434-633
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 195, 28

Conread position: 445-632
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 449-621
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 449-628
Cow position:
Alignm length: 180
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 459-619
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 143, 0

Show alignments to all cow chromosomes.