Cow genome map

Conread name: rebs23c_e11.y1

Conread position: 164-608
Cow position:
Alignm length: 446
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 20

Conread position: 164-629
Cow position:
Alignm length: 479
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 101

Conread position: 171-515
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 41

Conread position: 171-566
Cow position:
Alignm length: 406
Alignm identity: 271
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 189, 39

Conread position: 171-575
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 140

Conread position: 171-579
Cow position:
Alignm length: 419
Alignm identity: 290
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 66, 29

Conread position: 171-591
Cow position:
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 86

Conread position: 171-618
Cow position:
Alignm length: 452
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 171-623
Cow position:
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 58

Conread position: 171-624
Cow position:
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 86

Conread position: 171-625
Cow position:
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 40

Conread position: 171-625
Cow position:
Alignm length: 458
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 162

Conread position: 171-626
Cow position:
Alignm length: 460
Alignm identity: 302
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 236, 41

Conread position: 171-626
Cow position:
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 175

Conread position: 171-629
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 44

Conread position: 171-630
Cow position:
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 150

Conread position: 171-630
Cow position:
Alignm length: 465
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 124

Conread position: 171-630
Cow position:
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 40

Conread position: 171-638
Cow position:
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 391

Conread position: 171-638
Cow position:
Alignm length: 470
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 7

Conread position: 171-638
Cow position:
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 151

Conread position: 171-638
Cow position:
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 35

Conread position: 172-625
Cow position:
Alignm length: 456
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 48

Conread position: 173-621
Cow position:
Alignm length: 453
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 13

Conread position: 173-627
Cow position:
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 171

Conread position: 173-638
Cow position:
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 38

Conread position: 174-614
Cow position:
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 92

Conread position: 180-595
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 156

Conread position: 180-623
Cow position:
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 48

Conread position: 181-573
Cow position:
Alignm length: 397
Alignm identity: 270
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 208, 76

Conread position: 182-537
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 157

Conread position: 186-561
Cow position:
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 74

Conread position: 188-626
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 59

Conread position: 189-620
Cow position:
Alignm length: 433
Alignm identity: 288
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 281, 22

Conread position: 190-579
Cow position:
Alignm length: 400
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 190, 90

Conread position: 190-630
Cow position:
Alignm length: 449
Alignm identity: 298
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 43, 71

Conread position: 198-563
Cow position:
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 56

Conread position: 199-577
Cow position:
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 202-633
Cow position:
Alignm length: 437
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 212-629
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 130

Conread position: 212-631
Cow position:
Alignm length: 421
Alignm identity: 273
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 412, 45

Conread position: 215-568
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 9

Conread position: 218-618
Cow position:
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 44

Conread position: 218-629
Cow position:
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 218-631
Cow position:
Alignm length: 421
Alignm identity: 277
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 79

Conread position: 223-557
Cow position:
Alignm length: 338
Alignm identity: 221
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 5, 30

Conread position: 223-628
Cow position:
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 98

Conread position: 224-551
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 38

Conread position: 225-530
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 32

Conread position: 225-539
Cow position:
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 32

Conread position: 225-578
Cow position:
Alignm length: 366
Alignm identity: 247
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 107

Conread position: 225-638
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 116

Conread position: 226-630
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 40

Conread position: 227-584
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 162, 23

Conread position: 228-563
Cow position:
Alignm length: 342
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 240

Conread position: 228-626
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 161

Conread position: 229-611
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 28

Conread position: 231-620
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 103

Conread position: 232-626
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 240

Conread position: 235-625
Cow position:
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 94

Conread position: 245-558
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 138, 0

Conread position: 246-635
Cow position:
Alignm length: 398
Alignm identity: 266
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 141, 178

Conread position: 253-639
Cow position:
Alignm length: 396
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 155, 68

Conread position: 254-627
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 102

Conread position: 257-611
Cow position:
Alignm length: 359
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 37

Conread position: 257-617
Cow position:
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 73

Conread position: 257-625
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 122

Conread position: 257-632
Cow position:
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 261-606
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 270-644
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 56

Conread position: 276-625
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 170

Conread position: 280-616
Cow position:
Alignm length: 342
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 13

Conread position: 282-625
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 132

Conread position: 293-623
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 156

Conread position: 294-577
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 113, 243

Conread position: 296-616
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 154, 38

Conread position: 296-617
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 18

Conread position: 296-634
Cow position:
Alignm length: 348
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 171

Conread position: 299-558
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 177

Conread position: 300-591
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 158

Conread position: 302-619
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 44

Conread position: 310-626
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 284

Conread position: 311-644
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 37

Conread position: 314-628
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 20

Conread position: 315-558
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 19

Conread position: 334-627
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 82, 184

Conread position: 340-554
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 11

Conread position: 341-578
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 63, 151

Conread position: 353-638
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 106, 62

Conread position: 356-563
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 75

Conread position: 356-623
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 98

Conread position: 357-591
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 102

Conread position: 364-621
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 167

Conread position: 376-546
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 74

Conread position: 380-644
Cow position:
Alignm length: 272
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 98

Conread position: 388-630
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 215

Conread position: 404-629
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 9

Conread position: 404-633
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 407-630
Cow position:
Alignm length: 224
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 409-596
Cow position:
Alignm length: 189
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 124

Conread position: 409-633
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 162

Conread position: 422-591
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 428-565
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 428-629
Cow position:
Alignm length: 202
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 428-633
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 12

Conread position: 459-628
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 141, 83

Show alignments to all cow chromosomes.