Cow genome map

Conread name: rebs23c_e11.y1

Conread position: 163-644
Cow position: chr24:34272449-34272936 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 318
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 155, 224

Conread position: 164-558
Cow position: chr24:32609286-32609688 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 171-556
Cow position: chr24:17407051-17407428 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 40

Conread position: 171-569
Cow position: chr24:31323943-31324338 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 54

Conread position: 171-577
Cow position: chr24:35986056-35985670 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 209, 40

Conread position: 171-621
Cow position: chr24:3493549-3493990 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 15

Conread position: 171-621
Cow position: chr24:24491355-24490916 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 44

Conread position: 171-623
Cow position: chr24:31811842-31812292 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 60

Conread position: 171-625
Cow position: chr24:27844865-27844424 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 165

Conread position: 171-626
Cow position: chr24:2402722-2402263 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 171-629
Cow position: chr24:33098832-33098363 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 64

Conread position: 171-630
Cow position: chr24:19466278-19465807 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 111

Conread position: 171-630
Cow position: chr24:42103025-42103472 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 80

Conread position: 171-633
Cow position: chr24:201978-201520 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 104

Conread position: 171-633
Cow position: chr24:2674987-2675435 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 171-633
Cow position: chr24:37650334-37650781 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 171-633
Cow position: chr24:40129767-40130243 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 99

Conread position: 171-638
Cow position: chr24:17104909-17104449 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 171-644
Cow position: chr24:18741914-18741447 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 171-644
Cow position: chr24:32054326-32054771 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 179

Conread position: 172-530
Cow position: chr24:7917713-7917348 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 87

Conread position: 172-578
Cow position: chr24:29170632-29171022 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 207, 31

Conread position: 172-638
Cow position: chr24:39850221-39849772 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 172-644
Cow position: chr24:6102465-6102950 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 319
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 195

Conread position: 173-617
Cow position: chr24:33230323-33230772 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 306
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 115, 62

Conread position: 173-629
Cow position: chr24:30235535-30235981 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 101

Conread position: 173-630
Cow position: chr24:32205139-32204682 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 173

Conread position: 174-537
Cow position: chr24:30484276-30483928 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 215, 37

Conread position: 174-563
Cow position: chr24:211639-212033 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 302

Conread position: 174-627
Cow position: chr24:11886820-11887265 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 74

Conread position: 174-638
Cow position: chr24:11839839-11840306 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 5

Conread position: 176-626
Cow position: chr24:29679652-29679204 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 237

Conread position: 178-631
Cow position: chr24:28319544-28319090 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 153

Conread position: 179-539
Cow position: chr24:28303687-28303343 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 93

Conread position: 186-638
Cow position: chr24:17311539-17311104 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 162

Conread position: 189-557
Cow position: chr24:27054081-27054451 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 72

Conread position: 191-615
Cow position: chr24:15246958-15246545 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 20

Conread position: 192-557
Cow position: chr24:26929273-26928904 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 173

Conread position: 196-629
Cow position: chr24:9222696-9222271 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 281
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 199, 210

Conread position: 202-526
Cow position: chr24:30177922-30178250 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 121

Conread position: 211-631
Cow position: chr24:42345313-42344885 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 31

Conread position: 214-621
Cow position: chr24:1269503-1269886 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 215-617
Cow position: chr24:15057101-15057496 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 218-644
Cow position: chr24:33944109-33944524 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 91

Conread position: 224-630
Cow position: chr24:18331444-18331832 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 100

Conread position: 225-591
Cow position: chr24:8886625-8886984 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 156, 97

Conread position: 225-638
Cow position: chr24:31816294-31816697 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 140

Conread position: 226-550
Cow position: chr24:27608384-27608065 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 26

Conread position: 228-627
Cow position: chr24:27726292-27725902 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 79

Conread position: 230-510
Cow position: chr24:35073806-35074086 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 149, 103

Conread position: 232-639
Cow position: chr24:25885442-25885035 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 83

Conread position: 233-639
Cow position: chr24:20942894-20943273 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 169, 33

Conread position: 234-631
Cow position: chr24:7913716-7914118 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 359

Conread position: 239-623
Cow position: chr24:30314313-30313922 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 212

Conread position: 240-633
Cow position: chr24:19769222-19769609 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 67

Conread position: 242-514
Cow position: chr24:17363919-17363651 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 82, 24

Conread position: 253-552
Cow position: chr24:2970870-2970570 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 88

Conread position: 267-605
Cow position: chr24:27824215-27824550 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 54

Conread position: 268-597
Cow position: chr24:2096137-2095802 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 154, 66

Conread position: 270-579
Cow position: chr24:43927568-43927271 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 142, 70

Conread position: 277-631
Cow position: chr24:5633276-5632919 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 14, 25

Conread position: 280-567
Cow position: chr24:17285234-17284936 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 287-608
Cow position: chr24:34396402-34396088 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 10

Conread position: 289-644
Cow position: chr24:24457474-24457121 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 100, 35

Conread position: 291-558
Cow position: chr24:22224952-22225228 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 176

Conread position: 293-625
Cow position: chr24:31359099-31359427 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 170

Conread position: 297-550
Cow position: chr24:39833735-39833482 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 163

Conread position: 299-558
Cow position: chr24:39143388-39143653 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 13

Conread position: 303-644
Cow position: chr24:28990351-28990680 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 6, 59

Conread position: 304-630
Cow position: chr24:34008793-34008462 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 20

Conread position: 314-591
Cow position: chr24:6132079-6131798 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 113, 224

Conread position: 338-568
Cow position: chr24:16895618-16895386 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 109

Conread position: 338-626
Cow position: chr24:18017047-18017334 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 17

Conread position: 343-620
Cow position: chr24:18357230-18356951 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 94

Conread position: 344-578
Cow position: chr24:37037723-37037963 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 41

Conread position: 344-642
Cow position: chr24:6912527-6912239 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 121, 62

Conread position: 346-591
Cow position: chr24:19736502-19736260 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 24

Conread position: 388-621
Cow position: chr24:27713536-27713301 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 201

Conread position: 394-621
Cow position: chr24:29561700-29561469 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 74

Conread position: 404-633
Cow position: chr24:39791428-39791654 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 56, 9

Conread position: 410-630
Cow position: chr24:13948014-13948232 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 124

Conread position: 415-626
Cow position: chr24:230175-230392 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 417-633
Cow position: chr24:30308656-30308440 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 156

Conread position: 419-625
Cow position: chr24:14457820-14457618 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 79

Conread position: 422-627
Cow position: chr24:37823434-37823633 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 423-623
Cow position: chr24:20364503-20364306 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 20

Conread position: 427-644
Cow position: chr24:27284731-27284942 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 174, 89

Conread position: 428-620
Cow position: chr24:28042884-28043078 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 189

Conread position: 428-625
Cow position: chr24:15288732-15288936 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 155

Conread position: 428-630
Cow position: chr24:27349268-27349064 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 108

Conread position: 429-625
Cow position: chr24:37975070-37974875 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 152

Conread position: 464-625
Cow position: chr24:22133118-22133277 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 135, 0

Show alignments to all cow chromosomes.