Cow genome map


           Conread name:
           rebs23c_e11.y1
        

               Conread position:
               167-619
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 94
               

               Conread position:
               171-506
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 39
               

               Conread position:
               171-524
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 40
               

               Conread position:
               171-575
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 15
               

               Conread position:
               171-578
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 86
               

               Conread position:
               171-591
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 172
               

               Conread position:
               171-617
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 51
               

               Conread position:
               171-619
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 45
               

               Conread position:
               171-621
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               171-625
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 90
               

               Conread position:
               171-631
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 15
               

               Conread position:
               171-633
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 147
               

               Conread position:
               172-537
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               172-626
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               415, 75
               

               Conread position:
               173-558
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 113
               

               Conread position:
               173-578
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 163
               

               Conread position:
               173-621
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 162
               

               Conread position:
               173-623
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 38
               

               Conread position:
               175-558
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 28
               

               Conread position:
               175-616
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 160
               

               Conread position:
               175-633
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               177-562
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               179-556
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               201, 7
               

               Conread position:
               186-624
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 153
               

               Conread position:
               186-629
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 49
               

               Conread position:
               187-638
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 199
               

               Conread position:
               191-562
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 145
               

               Conread position:
               192-578
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 43
               

               Conread position:
               194-628
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               198-629
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 128
               

               Conread position:
               212-558
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 129
               

               Conread position:
               215-625
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 7
               

               Conread position:
               219-644
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               224-629
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               225-568
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               169, 41
               

               Conread position:
               225-608
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 32
               

               Conread position:
               225-629
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               226-558
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               186, 100
               

               Conread position:
               227-627
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 30
               

               Conread position:
               229-568
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               231-622
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 45
               

               Conread position:
               235-578
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               150, 22
               

               Conread position:
               236-636
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 21
               

               Conread position:
               237-633
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 99
               

               Conread position:
               245-515
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               257-562
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               258-632
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               126, 76
               

               Conread position:
               262-568
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 210
               

               Conread position:
               266-558
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               267-578
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               150, 42
               

               Conread position:
               268-633
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               188, 10
               

               Conread position:
               280-600
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               281-627
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 182
               

               Conread position:
               282-630
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               288-558
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               288-621
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               288-627
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 116
               

               Conread position:
               292-625
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               297-583
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               302-633
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               309-633
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               102, 23
               

               Conread position:
               311-634
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 163
               

               Conread position:
               325-627
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 147
               

               Conread position:
               326-557
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 135
               

               Conread position:
               333-623
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               335-558
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               338-507
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               346-633
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               359-563
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               364-591
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               365-554
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               370-605
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               373-627
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               378-627
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 218
               

               Conread position:
               381-627
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 232
               

               Conread position:
               387-631
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               390-555
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               395-616
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               403-623
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 152
               

               Conread position:
               408-628
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               409-625
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               409-630
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               409-633
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 192
               

               Conread position:
               409-644
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               416-630
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               417-633
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 180
               

               Conread position:
               427-625
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 174
               

               Conread position:
               428-614
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               180, 34
               

               Conread position:
               428-629
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 143
               

               Conread position:
               429-633
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               452-644
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               457-634
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               142, 108
               

               Conread position:
               463-627
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               478-644
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 0
               
Show alignments to all cow chromosomes.