Cow genome map


           Conread name:
           rebs23c_e11.y1
        

               Conread position:
               170-578
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 41
               

               Conread position:
               170-633
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 87
               

               Conread position:
               171-507
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 117
               

               Conread position:
               171-558
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               276
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               171-558
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 284
               

               Conread position:
               171-563
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               222, 161
               

               Conread position:
               171-578
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 91
               

               Conread position:
               171-607
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               258, 86
               

               Conread position:
               171-611
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 436
               

               Conread position:
               171-618
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 223
               

               Conread position:
               171-619
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 15
               

               Conread position:
               171-620
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 38
               

               Conread position:
               171-622
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 29
               

               Conread position:
               171-623
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 59
               

               Conread position:
               171-623
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               228, 20
               

               Conread position:
               171-626
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 86
               

               Conread position:
               171-627
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 190
               

               Conread position:
               171-631
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               303
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               111, 147
               

               Conread position:
               171-632
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               171-632
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               219, 40
               

               Conread position:
               171-633
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 179
               

               Conread position:
               171-634
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 50
               

               Conread position:
               171-638
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               172-558
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               172-612
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               172-627
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               172-638
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               234, 39
               

               Conread position:
               173-563
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               173-625
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 130
               

               Conread position:
               175-625
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 56
               

               Conread position:
               178-627
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               179-626
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 133
               

               Conread position:
               180-618
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 49
               

               Conread position:
               183-556
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               80, 90
               

               Conread position:
               186-638
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 234
               

               Conread position:
               187-633
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               192-558
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               146, 174
               

               Conread position:
               198-568
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               198-625
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               198-627
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 285
               

               Conread position:
               212-558
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 15
               

               Conread position:
               212-576
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               216-622
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 9
               

               Conread position:
               225-522
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               107, 130
               

               Conread position:
               225-623
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               225-629
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               91, 248
               

               Conread position:
               225-631
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               163, 107
               

               Conread position:
               225-638
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               287
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               43, 85
               

               Conread position:
               225-638
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               155, 109
               

               Conread position:
               227-633
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 88
               

               Conread position:
               232-540
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               148, 116
               

               Conread position:
               232-557
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               233-533
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 101
               

               Conread position:
               235-633
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 100
               

               Conread position:
               235-638
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 51
               

               Conread position:
               241-591
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 68
               

               Conread position:
               243-618
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 95
               

               Conread position:
               254-558
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               226, 119
               

               Conread position:
               257-623
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               263-633
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 87
               

               Conread position:
               265-568
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               267-556
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               269-583
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 95
               

               Conread position:
               275-578
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               277-591
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 52
               

               Conread position:
               281-583
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               267, 59
               

               Conread position:
               282-633
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               136, 149
               

               Conread position:
               289-627
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               100, 51
               

               Conread position:
               293-638
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               294-631
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               296-619
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               299-629
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               301-562
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               117, 80
               

               Conread position:
               309-554
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               311-633
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               110, 36
               

               Conread position:
               316-629
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               102, 18
               

               Conread position:
               322-625
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               324-632
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               332-630
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               336-578
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               338-578
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               338-601
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               346-630
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               112, 75
               

               Conread position:
               348-591
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               357-577
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 50
               

               Conread position:
               385-629
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               387-634
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               389-644
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               390-618
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               415-627
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               429-627
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               433-633
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 167
               

               Conread position:
               436-625
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 164
               

               Conread position:
               437-625
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               459-627
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               463-633
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               465-629
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               99, 116
               
Show alignments to all cow chromosomes.