Cow genome map


           Conread name:
           rebs23c_e11.y1
        

               Conread position:
               164-557
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 33
               

               Conread position:
               170-567
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               289, 78
               

               Conread position:
               171-526
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               235, 44
               

               Conread position:
               171-553
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 38
               

               Conread position:
               171-558
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 40
               

               Conread position:
               171-558
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 181
               

               Conread position:
               171-563
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 178
               

               Conread position:
               171-578
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 40
               

               Conread position:
               171-579
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               214, 40
               

               Conread position:
               171-607
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 40
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               69, 163
               

               Conread position:
               171-616
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 52
               

               Conread position:
               171-623
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               171-629
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 148
               

               Conread position:
               171-630
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 95
               

               Conread position:
               171-631
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               171-631
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 11
               

               Conread position:
               171-632
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 93
               

               Conread position:
               171-633
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               247, 74
               

               Conread position:
               171-638
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 163
               

               Conread position:
               171-638
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               269, 28
               

               Conread position:
               171-644
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 29
               

               Conread position:
               172-621
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 47
               

               Conread position:
               173-556
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 168
               

               Conread position:
               173-568
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 240
               

               Conread position:
               174-547
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 5
               

               Conread position:
               174-638
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 10
               

               Conread position:
               175-562
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 215
               

               Conread position:
               178-532
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               178-566
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 125
               

               Conread position:
               179-634
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 40
               

               Conread position:
               179-644
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 32
               

               Conread position:
               181-509
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               237, 76
               

               Conread position:
               181-629
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 76
               

               Conread position:
               182-541
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 88
               

               Conread position:
               194-638
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 144
               

               Conread position:
               205-638
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               215-630
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 9
               

               Conread position:
               216-617
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 91
               

               Conread position:
               220-509
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               222-630
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 262
               

               Conread position:
               224-562
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               182, 33
               

               Conread position:
               224-627
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 162
               

               Conread position:
               224-631
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               225-591
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               226-628
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               161, 108
               

               Conread position:
               226-630
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               161, 89
               

               Conread position:
               227-557
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               159, 30
               

               Conread position:
               227-628
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               176, 30
               

               Conread position:
               229-611
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               187, 85
               

               Conread position:
               231-578
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               232-529
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 127
               

               Conread position:
               232-625
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 25
               

               Conread position:
               237-578
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               237-630
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 237
               

               Conread position:
               237-633
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 150
               

               Conread position:
               238-616
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 96
               

               Conread position:
               239-529
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               179, 81
               

               Conread position:
               241-627
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 95
               

               Conread position:
               242-578
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 114
               

               Conread position:
               243-628
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               245-616
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               245-625
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               193, 21
               

               Conread position:
               254-631
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               256-578
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               136, 94
               

               Conread position:
               257-578
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               28, 96
               

               Conread position:
               257-579
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               257-623
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 53
               

               Conread position:
               257-627
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 122
               

               Conread position:
               258-557
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 186
               

               Conread position:
               267-568
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               267-578
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 51
               

               Conread position:
               276-630
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               107, 75
               

               Conread position:
               288-631
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               92, 185
               

               Conread position:
               293-562
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               294-558
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               124, 113
               

               Conread position:
               302-630
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               115, 129
               

               Conread position:
               303-565
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               309-621
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               310-573
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               310-629
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 164
               

               Conread position:
               311-558
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               107, 120
               

               Conread position:
               316-557
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               316-632
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               321-577
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               88, 147
               

               Conread position:
               323-627
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               325-578
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               326-628
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 165
               

               Conread position:
               334-630
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 253
               

               Conread position:
               336-625
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               342-634
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               79, 255
               

               Conread position:
               370-627
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               51, 236
               

               Conread position:
               381-630
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               387-620
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               388-623
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               406-625
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               415-568
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               417-627
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               43, 188
               

               Conread position:
               417-632
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 183
               

               Conread position:
               422-630
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 142
               

               Conread position:
               428-619
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               428-625
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               428-625
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               430-627
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 54
               
Show alignments to all cow chromosomes.