Cow genome map
| Conread name: | rebs23c_e11.y1 |
| Conread position: | 164-558 |
| Cow position: | chr5:34463891-34463487 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 171-509 |
| Cow position: | chr5:27015397-27015722 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 64 |
| Conread position: | 171-538 |
| Cow position: | chr5:30486956-30487313 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 218, 40 |
| Conread position: | 171-550 |
| Cow position: | chr5:34638598-34638967 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 33 |
| Conread position: | 171-554 |
| Cow position: | chr5:15598528-15598148 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 15 |
| Conread position: | 171-557 |
| Cow position: | chr5:27103086-27102704 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 171-558 |
| Cow position: | chr5:5938029-5938413 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 165 |
| Conread position: | 171-558 |
| Cow position: | chr5:12873453-12873842 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 247, 38 |
| Conread position: | 171-563 |
| Cow position: | chr5:29903817-29903427 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 122 |
| Conread position: | 171-563 |
| Cow position: | chr5:64321455-64321850 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 30 |
| Conread position: | 171-578 |
| Cow position: | chr5:6044991-6045407 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 171-579 |
| Cow position: | chr5:52645375-52644968 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 165 |
| Conread position: | 171-617 |
| Cow position: | chr5:56523879-56524322 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 86 |
| Conread position: | 171-620 |
| Cow position: | chr5:61725676-61726112 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 18 |
| Conread position: | 171-622 |
| Cow position: | chr5:41546185-41545740 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 77 |
| Conread position: | 171-622 |
| Cow position: | chr5:66366239-66366668 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 40 |
| Conread position: | 171-625 |
| Cow position: | chr5:30276400-30276846 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 81 |
| Conread position: | 171-626 |
| Cow position: | chr5:5111372-5110912 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 193 |
| Conread position: | 171-627 |
| Cow position: | chr5:26467327-26467788 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 54 |
| Conread position: | 171-627 |
| Cow position: | chr5:44752607-44752149 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 171-627 |
| Cow position: | chr5:45845988-45845530 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 67 |
| Conread position: | 171-627 |
| Cow position: | chr5:68718595-68719028 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 425, 55 |
| Conread position: | 171-629 |
| Cow position: | chr5:9894419-9893964 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 171-629 |
| Cow position: | chr5:53055848-53055399 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 213, 122 |
| Conread position: | 171-630 |
| Cow position: | chr5:4166375-4166805 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 150 |
| Conread position: | 171-630 |
| Cow position: | chr5:47317263-47316812 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 86 |
| Conread position: | 171-630 |
| Cow position: | chr5:66338791-66339236 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 171-630 |
| Cow position: | chr5:67932759-67932309 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 171-633 |
| Cow position: | chr5:4710436-4709988 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 171-637 |
| Cow position: | chr5:50821493-50821962 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 136 |
| Conread position: | 171-638 |
| Cow position: | chr5:44797010-44796564 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 40 |
| Conread position: | 171-642 |
| Cow position: | chr5:34887493-34887022 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 106 |
| Conread position: | 172-509 |
| Cow position: | chr5:34915848-34916173 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 85 |
| Conread position: | 172-558 |
| Cow position: | chr5:33081083-33080701 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 172-591 |
| Cow position: | chr5:57935407-57934984 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 172-623 |
| Cow position: | chr5:12323088-12322651 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 39 |
| Conread position: | 173-606 |
| Cow position: | chr5:15363600-15364021 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 38 |
| Conread position: | 173-633 |
| Cow position: | chr5:46510161-46509698 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 176 |
| Conread position: | 174-558 |
| Cow position: | chr5:64524171-64523772 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 174-568 |
| Cow position: | chr5:58793907-58793506 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 184 |
| Conread position: | 178-629 |
| Cow position: | chr5:65941540-65941091 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 8 |
| Conread position: | 180-571 |
| Cow position: | chr5:24348830-24349210 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 22 |
| Conread position: | 180-623 |
| Cow position: | chr5:66257359-66257792 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 31 |
| Conread position: | 181-558 |
| Cow position: | chr5:61576255-61576636 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 10 |
| Conread position: | 181-615 |
| Cow position: | chr5:72564474-72564910 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 181-620 |
| Cow position: | chr5:14314237-14314679 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 74 |
| Conread position: | 181-627 |
| Cow position: | chr5:21617170-21617615 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 151 |
| Conread position: | 186-578 |
| Cow position: | chr5:20407943-20407567 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 77 |
| Conread position: | 196-558 |
| Cow position: | chr5:65601193-65601548 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 15 |
| Conread position: | 197-578 |
| Cow position: | chr5:41129498-41129853 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 197-632 |
| Cow position: | chr5:63987716-63987282 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 65 |
| Conread position: | 197-633 |
| Cow position: | chr5:43992056-43992490 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 204-568 |
| Cow position: | chr5:32697077-32696722 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 212-534 |
| Cow position: | chr5:26595357-26595036 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 148, 44 |
| Conread position: | 212-578 |
| Cow position: | chr5:31640173-31640536 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 172 |
| Conread position: | 215-627 |
| Cow position: | chr5:11668430-11668027 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 215-629 |
| Cow position: | chr5:458222-458648 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 218-630 |
| Cow position: | chr5:54311086-54311497 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 6 |
| Conread position: | 218-633 |
| Cow position: | chr5:49685530-49685112 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 265 |
| Conread position: | 220-638 |
| Cow position: | chr5:57074581-57074161 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 132 |
| Conread position: | 224-558 |
| Cow position: | chr5:34049867-34050209 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 118 |
| Conread position: | 224-604 |
| Cow position: | chr5:27306076-27306441 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 127 |
| Conread position: | 224-621 |
| Cow position: | chr5:40109259-40109644 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 83 |
| Conread position: | 224-625 |
| Cow position: | chr5:43929976-43929578 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 114 |
| Conread position: | 224-627 |
| Cow position: | chr5:35684692-35685095 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 314 |
| Conread position: | 224-627 |
| Cow position: | chr5:69337590-69337978 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 224-632 |
| Cow position: | chr5:55967125-55966720 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 242 |
| Conread position: | 225-629 |
| Cow position: | chr5:37814382-37814789 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 193, 96 |
| Conread position: | 225-630 |
| Cow position: | chr5:32339216-32338805 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 226-623 |
| Cow position: | chr5:37646792-37646388 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 227-575 |
| Cow position: | chr5:43738187-43737855 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 176, 23 |
| Conread position: | 231-629 |
| Cow position: | chr5:30253510-30253901 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 26 |
| Conread position: | 231-630 |
| Cow position: | chr5:29353364-29352965 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 26 |
| Conread position: | 232-630 |
| Cow position: | chr5:24996458-24996060 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 50 |
| Conread position: | 233-621 |
| Cow position: | chr5:41164855-41165242 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 235-644 |
| Cow position: | chr5:11229905-11229501 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 227 |
| Conread position: | 236-614 |
| Cow position: | chr5:22243015-22242618 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 39 |
| Conread position: | 236-630 |
| Cow position: | chr5:36868515-36868896 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 153, 98 |
| Conread position: | 237-627 |
| Cow position: | chr5:56070624-56071018 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 34 |
| Conread position: | 239-535 |
| Cow position: | chr5:64823540-64823243 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 116 |
| Conread position: | 239-618 |
| Cow position: | chr5:8821239-8820864 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 239-627 |
| Cow position: | chr5:72895465-72895846 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 172, 87 |
| Conread position: | 241-614 |
| Cow position: | chr5:5257522-5257143 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 241-625 |
| Cow position: | chr5:64176346-64175970 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 177 |
| Conread position: | 241-644 |
| Cow position: | chr5:25495563-25495181 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 64 |
| Conread position: | 244-623 |
| Cow position: | chr5:56028752-56028387 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 13 |
| Conread position: | 246-619 |
| Cow position: | chr5:44447109-44446715 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 357 |
| Conread position: | 248-602 |
| Cow position: | chr5:62142452-62142811 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 86 |
| Conread position: | 249-515 |
| Cow position: | chr5:60126156-60126421 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 80 |
| Conread position: | 253-633 |
| Cow position: | chr5:35969329-35969696 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 255-511 |
| Cow position: | chr5:71578963-71579220 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 255-557 |
| Cow position: | chr5:11427453-11427143 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 115, 218 |
| Conread position: | 257-622 |
| Cow position: | chr5:71494607-71494974 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 257-629 |
| Cow position: | chr5:57736905-57737261 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 258-624 |
| Cow position: | chr5:58320670-58320315 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 160, 76 |
| Conread position: | 267-632 |
| Cow position: | chr5:23169018-23168663 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 59 |
| Conread position: | 271-633 |
| Cow position: | chr5:7044905-7044546 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 9 |
| Conread position: | 273-620 |
| Cow position: | chr5:50215752-50215413 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 273-630 |
| Cow position: | chr5:34977031-34976680 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 276-629 |
| Cow position: | chr5:5855689-5856020 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 291, 56 |
| Conread position: | 280-505 |
| Cow position: | chr5:17644842-17644616 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 282-633 |
| Cow position: | chr5:61810608-61810935 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 282-644 |
| Cow position: | chr5:46512951-46512597 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 286-619 |
| Cow position: | chr5:14629996-14629655 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 288-633 |
| Cow position: | chr5:44028480-44028145 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 289-568 |
| Cow position: | chr5:6286604-6286332 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 290-631 |
| Cow position: | chr5:57266074-57265742 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 171, 93 |
| Conread position: | 291-616 |
| Cow position: | chr5:62638730-62639052 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 296-620 |
| Cow position: | chr5:56014564-56014881 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 164, 40 |
| Conread position: | 298-636 |
| Cow position: | chr5:30950088-30949748 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 135 |
| Conread position: | 300-633 |
| Cow position: | chr5:30629324-30628993 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 301-627 |
| Cow position: | chr5:55955740-55956070 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 117, 76 |
| Conread position: | 302-557 |
| Cow position: | chr5:61809854-61809596 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 303-575 |
| Cow position: | chr5:16214524-16214795 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 303-633 |
| Cow position: | chr5:54060110-54060442 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 306-607 |
| Cow position: | chr5:39874964-39875264 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 313-620 |
| Cow position: | chr5:56877335-56877633 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 317-631 |
| Cow position: | chr5:19523742-19524062 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 319-619 |
| Cow position: | chr5:63865644-63865958 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 103, 211 |
| Conread position: | 325-628 |
| Cow position: | chr5:70952021-70951731 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 81, 141 |
| Conread position: | 329-630 |
| Cow position: | chr5:64027149-64026856 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 135 |
| Conread position: | 330-578 |
| Cow position: | chr5:67540343-67540090 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 330-617 |
| Cow position: | chr5:57101916-57101635 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 40, 90 |
| Conread position: | 332-577 |
| Cow position: | chr5:72951701-72951954 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 335-642 |
| Cow position: | chr5:64592227-64591922 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 336-629 |
| Cow position: | chr5:991332-991634 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 71, 125 |
| Conread position: | 336-633 |
| Cow position: | chr5:40241918-40242208 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 337-627 |
| Cow position: | chr5:22666960-22667230 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 339-633 |
| Cow position: | chr5:63427137-63426836 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 340-633 |
| Cow position: | chr5:44726456-44726169 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 342-617 |
| Cow position: | chr5:49474670-49474394 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 343-621 |
| Cow position: | chr5:12434409-12434695 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 351-591 |
| Cow position: | chr5:26150535-26150297 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 351-619 |
| Cow position: | chr5:54375633-54375352 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 351-621 |
| Cow position: | chr5:45574497-45574772 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 5 |
| Conread position: | 351-633 |
| Cow position: | chr5:49440991-49440709 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 358-633 |
| Cow position: | chr5:7697893-7698164 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 60, 114 |
| Conread position: | 358-633 |
| Cow position: | chr5:58446691-58446972 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 248 |
| Conread position: | 360-623 |
| Cow position: | chr5:60183691-60183960 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 54, 251 |
| Conread position: | 364-623 |
| Cow position: | chr5:62378685-62378934 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 370-628 |
| Cow position: | chr5:36039104-36038841 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 378-630 |
| Cow position: | chr5:55019204-55019456 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 387-644 |
| Cow position: | chr5:43402817-43403078 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 201 |
| Conread position: | 398-634 |
| Cow position: | chr5:66551967-66551728 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 403-633 |
| Cow position: | chr5:45420196-45419971 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 404-627 |
| Cow position: | chr5:59627035-59626812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 405-621 |
| Cow position: | chr5:66530858-66531073 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 405-632 |
| Cow position: | chr5:49342111-49341886 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 410-629 |
| Cow position: | chr5:56339074-56338861 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 416-633 |
| Cow position: | chr5:24136663-24136880 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 428-612 |
| Cow position: | chr5:35982779-35982592 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 428-627 |
| Cow position: | chr5:17602239-17602047 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 428-630 |
| Cow position: | chr5:20288302-20288099 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 431-625 |
| Cow position: | chr5:57686776-57686581 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 171 |
| Conread position: | 432-644 |
| Cow position: | chr5:30232871-30233079 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 457-624 |
| Cow position: | chr5:9234000-9233833 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 147 |
Show alignments to all cow chromosomes.