Cow genome map
| Conread name: | rebs23c_e11.y1 |
| Conread position: | 32-633 |
| Cow position: | chr6:18143771-18144375 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 383, 395 |
| Conread position: | 156-632 |
| Cow position: | chr6:7131168-7130699 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 170-558 |
| Cow position: | chr6:63272899-63272506 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 171-539 |
| Cow position: | chr6:11192733-11192378 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 121 |
| Conread position: | 171-555 |
| Cow position: | chr6:48169664-48170040 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 161, 147 |
| Conread position: | 171-561 |
| Cow position: | chr6:12337704-12338101 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 86 |
| Conread position: | 171-578 |
| Cow position: | chr6:24031094-24031501 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 254 |
| Conread position: | 171-583 |
| Cow position: | chr6:32121630-32122037 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 155 |
| Conread position: | 171-613 |
| Cow position: | chr6:24004266-24004696 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 171-618 |
| Cow position: | chr6:36652149-36652585 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 302 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 247, 15 |
| Conread position: | 171-620 |
| Cow position: | chr6:10176579-10176137 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 39 |
| Conread position: | 171-622 |
| Cow position: | chr6:16699981-16700430 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 39 |
| Conread position: | 171-627 |
| Cow position: | chr6:10106281-10105807 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 451 |
| Conread position: | 171-627 |
| Cow position: | chr6:13688092-13687643 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 161 |
| Conread position: | 171-627 |
| Cow position: | chr6:44078235-44078686 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 171-627 |
| Cow position: | chr6:65870743-65871208 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 395 |
| Conread position: | 171-629 |
| Cow position: | chr6:15305308-15305744 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 171-629 |
| Cow position: | chr6:54867231-54867691 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 40 |
| Conread position: | 171-633 |
| Cow position: | chr6:6343147-6343611 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 15 |
| Conread position: | 171-634 |
| Cow position: | chr6:18049306-18048838 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 86 |
| Conread position: | 171-634 |
| Cow position: | chr6:35181533-35181080 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 28 |
| Conread position: | 171-634 |
| Cow position: | chr6:67214461-67214932 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 86 |
| Conread position: | 171-644 |
| Cow position: | chr6:47305047-47305524 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 172-576 |
| Cow position: | chr6:28811275-28810875 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 62, 135 |
| Conread position: | 172-617 |
| Cow position: | chr6:49398897-49398456 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 155 |
| Conread position: | 172-628 |
| Cow position: | chr6:22332678-22332223 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 297 |
| Conread position: | 173-625 |
| Cow position: | chr6:46465549-46465991 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 169 |
| Conread position: | 173-627 |
| Cow position: | chr6:2546964-2547428 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 90 |
| Conread position: | 173-633 |
| Cow position: | chr6:66532081-66531644 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 175-629 |
| Cow position: | chr6:6060834-6060397 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 181 |
| Conread position: | 179-557 |
| Cow position: | chr6:59508075-59508460 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 180-563 |
| Cow position: | chr6:26728798-26728422 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 77 |
| Conread position: | 180-600 |
| Cow position: | chr6:4864810-4864400 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 186-525 |
| Cow position: | chr6:49410950-49410625 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 191-540 |
| Cow position: | chr6:18961783-18961430 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 205-568 |
| Cow position: | chr6:35613659-35613302 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 206-623 |
| Cow position: | chr6:53460816-53460399 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 19 |
| Conread position: | 212-629 |
| Cow position: | chr6:38853898-38853483 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 248 |
| Conread position: | 212-633 |
| Cow position: | chr6:54991232-54990822 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 45 |
| Conread position: | 213-577 |
| Cow position: | chr6:20098203-20097835 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 113 |
| Conread position: | 216-499 |
| Cow position: | chr6:48344093-48344379 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 9 |
| Conread position: | 216-620 |
| Cow position: | chr6:46860401-46860001 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 17 |
| Conread position: | 218-578 |
| Cow position: | chr6:15938081-15937730 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 7 |
| Conread position: | 218-633 |
| Cow position: | chr6:21869878-21869469 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 7 |
| Conread position: | 219-622 |
| Cow position: | chr6:63299262-63298865 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 5 |
| Conread position: | 219-625 |
| Cow position: | chr6:24468625-24468226 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 223-627 |
| Cow position: | chr6:52478656-52478238 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 224-578 |
| Cow position: | chr6:4383265-4383604 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 33 |
| Conread position: | 224-578 |
| Cow position: | chr6:60350527-60350167 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 224-623 |
| Cow position: | chr6:44194773-44194382 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 225-608 |
| Cow position: | chr6:28977258-28976885 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 225-611 |
| Cow position: | chr6:45065233-45064859 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 225-621 |
| Cow position: | chr6:38440955-38441338 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 181, 109 |
| Conread position: | 225-623 |
| Cow position: | chr6:15301044-15300667 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 225-625 |
| Cow position: | chr6:37148970-37149359 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 225-627 |
| Cow position: | chr6:51581486-51581082 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 209 |
| Conread position: | 226-553 |
| Cow position: | chr6:56376571-56376248 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 180, 11 |
| Conread position: | 227-530 |
| Cow position: | chr6:21542095-21542400 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 113 |
| Conread position: | 229-625 |
| Cow position: | chr6:55282513-55282122 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 230-644 |
| Cow position: | chr6:38207717-38207303 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 231-628 |
| Cow position: | chr6:53651818-53652214 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 111 |
| Conread position: | 232-632 |
| Cow position: | chr6:37199769-37199361 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 298 |
| Conread position: | 233-557 |
| Cow position: | chr6:35415740-35415411 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 233-578 |
| Cow position: | chr6:7190338-7189994 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 146, 101 |
| Conread position: | 235-619 |
| Cow position: | chr6:8965873-8966261 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 35 |
| Conread position: | 235-621 |
| Cow position: | chr6:45690810-45690444 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 235-630 |
| Cow position: | chr6:5609657-5609270 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 98 |
| Conread position: | 235-631 |
| Cow position: | chr6:50090423-50090818 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 33, 175 |
| Conread position: | 238-555 |
| Cow position: | chr6:68365759-68366074 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 142, 105 |
| Conread position: | 239-547 |
| Cow position: | chr6:24961932-24962239 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 163 |
| Conread position: | 240-621 |
| Cow position: | chr6:53025010-53024638 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 245-630 |
| Cow position: | chr6:54864873-54864485 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 144, 12 |
| Conread position: | 247-557 |
| Cow position: | chr6:15782730-15782410 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 137, 109 |
| Conread position: | 249-632 |
| Cow position: | chr6:6400745-6401127 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 121 |
| Conread position: | 249-632 |
| Cow position: | chr6:67456500-67456897 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 329 |
| Conread position: | 249-633 |
| Cow position: | chr6:66131105-66131486 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 130, 72 |
| Conread position: | 250-621 |
| Cow position: | chr6:528478-528117 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 251-558 |
| Cow position: | chr6:22503124-22502806 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 109, 229 |
| Conread position: | 251-568 |
| Cow position: | chr6:21231335-21231639 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 251-619 |
| Cow position: | chr6:59069829-59069456 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 253-578 |
| Cow position: | chr6:8788236-8787912 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 133, 97 |
| Conread position: | 255-619 |
| Cow position: | chr6:63720002-63720365 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 164, 65 |
| Conread position: | 257-530 |
| Cow position: | chr6:21456885-21456606 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 97 |
| Conread position: | 257-629 |
| Cow position: | chr6:7128597-7128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 264-634 |
| Cow position: | chr6:47574717-47575084 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 72 |
| Conread position: | 267-632 |
| Cow position: | chr6:47799113-47799470 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 274-579 |
| Cow position: | chr6:54936399-54936705 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 274-628 |
| Cow position: | chr6:1499460-1499821 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 80 |
| Conread position: | 280-627 |
| Cow position: | chr6:47355652-47355994 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 167, 54 |
| Conread position: | 281-557 |
| Cow position: | chr6:27888179-27888455 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 282-644 |
| Cow position: | chr6:15447378-15447011 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 80, 307 |
| Conread position: | 283-633 |
| Cow position: | chr6:35993408-35993763 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 97, 153 |
| Conread position: | 285-591 |
| Cow position: | chr6:47640604-47640294 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 187 |
| Conread position: | 289-642 |
| Cow position: | chr6:15243088-15243442 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 307 |
| Conread position: | 292-625 |
| Cow position: | chr6:120079-120415 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 292-629 |
| Cow position: | chr6:57546376-57546053 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 296-624 |
| Cow position: | chr6:60739859-60740185 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 297-563 |
| Cow position: | chr6:61608352-61608622 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 299-623 |
| Cow position: | chr6:67323163-67323477 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 300-624 |
| Cow position: | chr6:582428-582104 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 300-635 |
| Cow position: | chr6:4692136-4691796 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 241 |
| Conread position: | 301-625 |
| Cow position: | chr6:58370593-58370920 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 304-633 |
| Cow position: | chr6:46283146-46282827 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 309-638 |
| Cow position: | chr6:57571330-57571662 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 295 |
| Conread position: | 315-568 |
| Cow position: | chr6:15022698-15022432 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-621 |
| Cow position: | chr6:60118010-60118313 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 317-631 |
| Cow position: | chr6:21399892-21399580 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 104 |
| Conread position: | 319-629 |
| Cow position: | chr6:38640094-38640407 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 86, 219 |
| Conread position: | 320-547 |
| Cow position: | chr6:63011304-63011075 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 320-577 |
| Cow position: | chr6:29000058-28999815 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 210, 30 |
| Conread position: | 324-530 |
| Cow position: | chr6:12829354-12829148 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 324-638 |
| Cow position: | chr6:53841631-53841319 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 90 |
| Conread position: | 325-638 |
| Cow position: | chr6:14914375-14914049 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 326-558 |
| Cow position: | chr6:60667291-60667518 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 327-626 |
| Cow position: | chr6:62669745-62670038 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 328-644 |
| Cow position: | chr6:61168647-61168946 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 330-514 |
| Cow position: | chr6:38233834-38234020 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 24 |
| Conread position: | 330-529 |
| Cow position: | chr6:37376643-37376438 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 334-614 |
| Cow position: | chr6:50975936-50976209 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 336-627 |
| Cow position: | chr6:25615222-25614917 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 338-630 |
| Cow position: | chr6:22850363-22850080 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 340-633 |
| Cow position: | chr6:58597620-58597328 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 81, 91 |
| Conread position: | 344-627 |
| Cow position: | chr6:61524310-61524033 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 346-619 |
| Cow position: | chr6:59603317-59603044 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 352-578 |
| Cow position: | chr6:7119714-7119494 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 353-641 |
| Cow position: | chr6:60274109-60273823 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 357-633 |
| Cow position: | chr6:17794855-17794586 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 360-578 |
| Cow position: | chr6:66375426-66375208 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 370-632 |
| Cow position: | chr6:37332021-37332288 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 377-633 |
| Cow position: | chr6:23466108-23465855 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 387-619 |
| Cow position: | chr6:22985927-22985689 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 184 |
| Conread position: | 387-627 |
| Cow position: | chr6:694216-693972 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 190, 82 |
| Conread position: | 391-551 |
| Cow position: | chr6:67615496-67615332 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 402-630 |
| Cow position: | chr6:17068700-17068472 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 203 |
| Conread position: | 404-583 |
| Cow position: | chr6:60468190-60468367 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 404-644 |
| Cow position: | chr6:9302762-9302531 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 409-621 |
| Cow position: | chr6:2078863-2078647 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-634 |
| Cow position: | chr6:3350976-3351209 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 412-575 |
| Cow position: | chr6:32517140-32516987 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 417-619 |
| Cow position: | chr6:34119390-34119190 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 422-591 |
| Cow position: | chr6:32853156-32853325 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 423-563 |
| Cow position: | chr6:12197148-12197290 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 423-616 |
| Cow position: | chr6:19259374-19259179 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 424-618 |
| Cow position: | chr6:67451401-67451208 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 428-618 |
| Cow position: | chr6:62056588-62056779 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 428-633 |
| Cow position: | chr6:60266206-60266003 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 428-644 |
| Cow position: | chr6:49437308-49437526 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 188, 175 |
| Conread position: | 431-617 |
| Cow position: | chr6:53089986-53090172 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 434-628 |
| Cow position: | chr6:60516808-60516998 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 166, 27 |
| Conread position: | 435-628 |
| Cow position: | chr6:4702842-4702644 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 86 |
Show alignments to all cow chromosomes.