Cow genome map
| Conread name: | rebs25c_m1.y1 |
| Conread position: | 173-313 |
| Cow position: | chr29:23220526-23220390 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 177-385 |
| Cow position: | chr29:4480193-4479982 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 177-387 |
| Cow position: | chr29:34359001-34358792 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 137, 10 |
| Conread position: | 179-362 |
| Cow position: | chr29:32176657-32176830 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 179-383 |
| Cow position: | chr29:5892820-5893029 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 193 |
| Conread position: | 179-402 |
| Cow position: | chr29:43099770-43099547 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 111 |
| Conread position: | 179-408 |
| Cow position: | chr29:20770322-20770552 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 180-330 |
| Cow position: | chr29:17022127-17022278 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 180-387 |
| Cow position: | chr29:21443362-21443154 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 110 |
| Conread position: | 183-385 |
| Cow position: | chr29:44139262-44139060 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 81 |
| Conread position: | 183-407 |
| Cow position: | chr29:42364035-42363812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 111 |
| Conread position: | 184-389 |
| Cow position: | chr29:34359838-34359637 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 186-387 |
| Cow position: | chr29:1011596-1011406 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 53 |
| Conread position: | 186-401 |
| Cow position: | chr29:18450153-18449937 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 186-403 |
| Cow position: | chr29:38980090-38979877 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 186-405 |
| Cow position: | chr29:35292076-35292292 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 133 |
| Conread position: | 187-304 |
| Cow position: | chr29:24578848-24578965 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-308 |
| Cow position: | chr29:17154764-17154884 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 187-309 |
| Cow position: | chr29:18012543-18012665 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-314 |
| Cow position: | chr29:26615735-26615605 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 187-315 |
| Cow position: | chr29:5186508-5186380 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-319 |
| Cow position: | chr29:4002876-4003009 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 187-323 |
| Cow position: | chr29:28840141-28840277 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-323 |
| Cow position: | chr29:36217100-36217233 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 187-325 |
| Cow position: | chr29:4874898-4874755 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 187-325 |
| Cow position: | chr29:11527804-11527669 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 187-325 |
| Cow position: | chr29:30918534-30918672 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-328 |
| Cow position: | chr29:742664-742524 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-329 |
| Cow position: | chr29:10156316-10156179 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 187-329 |
| Cow position: | chr29:34687820-34687962 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-329 |
| Cow position: | chr29:43251182-43251036 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 187-330 |
| Cow position: | chr29:8926476-8926333 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-331 |
| Cow position: | chr29:40852913-40853057 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-332 |
| Cow position: | chr29:30708634-30708491 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 187-356 |
| Cow position: | chr29:28166233-28166068 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 187-368 |
| Cow position: | chr29:22723586-22723767 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-383 |
| Cow position: | chr29:44684088-44684281 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 187-385 |
| Cow position: | chr29:4070613-4070805 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 187-386 |
| Cow position: | chr29:32197682-32197880 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-386 |
| Cow position: | chr29:32894248-32894443 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-387 |
| Cow position: | chr29:4423454-4423263 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 187-387 |
| Cow position: | chr29:9310585-9310790 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 187-387 |
| Cow position: | chr29:10058550-10058356 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 187-387 |
| Cow position: | chr29:15947152-15947356 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 95 |
| Conread position: | 187-387 |
| Cow position: | chr29:17804520-17804717 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 187-387 |
| Cow position: | chr29:24188080-24187876 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 90 |
| Conread position: | 187-387 |
| Cow position: | chr29:28066476-28066667 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 187-387 |
| Cow position: | chr29:31928974-31929173 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 137, 70 |
| Conread position: | 187-391 |
| Cow position: | chr29:39111326-39111133 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 187-392 |
| Cow position: | chr29:29324435-29324228 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 147, 52 |
| Conread position: | 187-393 |
| Cow position: | chr29:30681725-30681509 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 131, 45 |
| Conread position: | 187-397 |
| Cow position: | chr29:5409156-5408944 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 126, 95 |
| Conread position: | 187-397 |
| Cow position: | chr29:5520500-5520286 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 187-397 |
| Cow position: | chr29:43544617-43544409 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 187-398 |
| Cow position: | chr29:396398-396600 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 187-398 |
| Cow position: | chr29:17109945-17110151 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 187-398 |
| Cow position: | chr29:36357114-36357326 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 136, 47 |
| Conread position: | 187-399 |
| Cow position: | chr29:1325428-1325645 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 187-399 |
| Cow position: | chr29:21196666-21196453 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 187-399 |
| Cow position: | chr29:26275595-26275800 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 187-399 |
| Cow position: | chr29:31943851-31944066 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 204 |
| Conread position: | 187-400 |
| Cow position: | chr29:20167409-20167624 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 180 |
| Conread position: | 187-400 |
| Cow position: | chr29:35677558-35677341 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 111, 95 |
| Conread position: | 187-400 |
| Cow position: | chr29:36952311-36952112 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 187-401 |
| Cow position: | chr29:5063130-5063345 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 187-401 |
| Cow position: | chr29:9378622-9378837 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 187-402 |
| Cow position: | chr29:9709679-9709895 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 187-402 |
| Cow position: | chr29:12680141-12680360 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 187-402 |
| Cow position: | chr29:17297121-17297340 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 112, 101 |
| Conread position: | 187-402 |
| Cow position: | chr29:19949294-19949507 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 187-402 |
| Cow position: | chr29:22162264-22162062 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 187-402 |
| Cow position: | chr29:35501669-35501463 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 187-403 |
| Cow position: | chr29:19762256-19762466 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 187-404 |
| Cow position: | chr29:16278973-16279182 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 202, 48 |
| Conread position: | 187-404 |
| Cow position: | chr29:25092099-25092308 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 187-404 |
| Cow position: | chr29:25737429-25737215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 122, 146 |
| Conread position: | 187-405 |
| Cow position: | chr29:16200493-16200271 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-405 |
| Cow position: | chr29:23874445-23874668 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 105, 94 |
| Conread position: | 187-405 |
| Cow position: | chr29:37618290-37618514 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 187-405 |
| Cow position: | chr29:41530835-41531057 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 122, 101 |
| Conread position: | 187-405 |
| Cow position: | chr29:42630106-42630323 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 202, 88 |
| Conread position: | 187-406 |
| Cow position: | chr29:38754954-38754731 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 187-407 |
| Cow position: | chr29:732606-732817 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 187-407 |
| Cow position: | chr29:16290711-16290931 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 112, 101 |
| Conread position: | 187-407 |
| Cow position: | chr29:23155213-23155442 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 187-407 |
| Cow position: | chr29:26017519-26017294 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 187-407 |
| Cow position: | chr29:31981816-31982029 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-407 |
| Cow position: | chr29:40791295-40791504 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 187-408 |
| Cow position: | chr29:22167093-22166879 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 187-408 |
| Cow position: | chr29:22613415-22613629 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 187-408 |
| Cow position: | chr29:29769366-29769146 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 187-408 |
| Cow position: | chr29:34773752-34773541 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 81, 123 |
| Conread position: | 187-408 |
| Cow position: | chr29:41112894-41112682 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 188-316 |
| Cow position: | chr29:26756685-26756558 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 188-329 |
| Cow position: | chr29:38978518-38978658 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 120, 78 |
| Conread position: | 188-377 |
| Cow position: | chr29:29057165-29057353 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 188-386 |
| Cow position: | chr29:7290762-7290955 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 188-387 |
| Cow position: | chr29:3292934-3293130 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 188-397 |
| Cow position: | chr29:40117558-40117762 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 188-400 |
| Cow position: | chr29:26540554-26540340 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 188-402 |
| Cow position: | chr29:26778869-26779078 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 188-404 |
| Cow position: | chr29:16657680-16657895 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 188-404 |
| Cow position: | chr29:28197020-28196816 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 188-404 |
| Cow position: | chr29:36530853-36531070 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 188-408 |
| Cow position: | chr29:29308586-29308374 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 188-408 |
| Cow position: | chr29:29923587-29923368 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 188-408 |
| Cow position: | chr29:31651397-31651610 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 103 |
| Conread position: | 189-377 |
| Cow position: | chr29:23825223-23825035 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-384 |
| Cow position: | chr29:30548763-30548957 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 120, 177 |
| Conread position: | 189-399 |
| Cow position: | chr29:35084235-35084024 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 172 |
| Conread position: | 189-400 |
| Cow position: | chr29:36781317-36781110 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 189-402 |
| Cow position: | chr29:4520327-4520536 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 198, 29 |
| Conread position: | 189-404 |
| Cow position: | chr29:7624166-7624369 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 189-405 |
| Cow position: | chr29:11434106-11434317 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 189-407 |
| Cow position: | chr29:21666074-21666293 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 189-407 |
| Cow position: | chr29:39038282-39038062 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 190-398 |
| Cow position: | chr29:5953871-5953658 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 191-400 |
| Cow position: | chr29:22735116-22734906 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 191-404 |
| Cow position: | chr29:2744278-2744064 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 91 |
| Conread position: | 192-398 |
| Cow position: | chr29:2056051-2056259 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 170, 128 |
| Conread position: | 192-399 |
| Cow position: | chr29:32656102-32655895 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 192-402 |
| Cow position: | chr29:22729558-22729767 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 193-344 |
| Cow position: | chr29:1556922-1557073 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-408 |
| Cow position: | chr29:31934370-31934584 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 194-401 |
| Cow position: | chr29:19125314-19125531 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 197-394 |
| Cow position: | chr29:15796481-15796677 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 46 |
| Conread position: | 197-397 |
| Cow position: | chr29:15797947-15798149 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 174 |
| Conread position: | 198-407 |
| Cow position: | chr29:12890681-12890883 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 199-402 |
| Cow position: | chr29:43088308-43088509 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 190, 40 |
| Conread position: | 201-387 |
| Cow position: | chr29:36697756-36697944 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 168 |
| Conread position: | 203-403 |
| Cow position: | chr29:22028951-22028758 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 204-408 |
| Cow position: | chr29:1614931-1615135 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-402 |
| Cow position: | chr29:14576862-14577060 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 205-403 |
| Cow position: | chr29:19420610-19420417 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 206-404 |
| Cow position: | chr29:25288919-25288715 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 208-408 |
| Cow position: | chr29:32215713-32215912 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 214-398 |
| Cow position: | chr29:40351063-40350883 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 215-398 |
| Cow position: | chr29:39638855-39639038 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 215-402 |
| Cow position: | chr29:7444048-7443865 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 219-399 |
| Cow position: | chr29:34274359-34274175 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 219-401 |
| Cow position: | chr29:40763677-40763495 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 219-405 |
| Cow position: | chr29:22577162-22576973 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 222-406 |
| Cow position: | chr29:936227-936409 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 223-406 |
| Cow position: | chr29:17282089-17282267 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 225-397 |
| Cow position: | chr29:4441181-4441008 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 54 |
| Conread position: | 226-408 |
| Cow position: | chr29:42797980-42798163 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 230-328 |
| Cow position: | chr29:18579811-18579713 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-392 |
| Cow position: | chr29:34688878-34688714 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 11 |
| Conread position: | 232-390 |
| Cow position: | chr29:30206839-30206689 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 232-407 |
| Cow position: | chr29:6774871-6774698 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 147, 132 |
| Conread position: | 233-375 |
| Cow position: | chr29:25846528-25846379 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 233-376 |
| Cow position: | chr29:41223196-41223340 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 234-405 |
| Cow position: | chr29:33143322-33143151 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-407 |
| Cow position: | chr29:23678742-23678908 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 236-408 |
| Cow position: | chr29:7414535-7414702 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 238-397 |
| Cow position: | chr29:42745047-42745211 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 245-400 |
| Cow position: | chr29:40112425-40112579 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 245-408 |
| Cow position: | chr29:36546739-36546573 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 248-406 |
| Cow position: | chr29:22776125-22776282 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 257-398 |
| Cow position: | chr29:10838996-10839137 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-403 |
| Cow position: | chr29:659357-659484 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 283-402 |
| Cow position: | chr29:38010526-38010646 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.