Cow genome map
| Conread name: | rebs25c_m1.y1 |
| Conread position: | 142-400 |
| Cow position: | chr9:53109339-53109079 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 163-398 |
| Cow position: | chr9:27345519-27345759 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 167-313 |
| Cow position: | chr9:35793738-35793593 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 169-330 |
| Cow position: | chr9:59699489-59699647 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 173-313 |
| Cow position: | chr9:5219116-5219256 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 177-407 |
| Cow position: | chr9:5263548-5263325 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 178-402 |
| Cow position: | chr9:59997987-59998204 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 179-404 |
| Cow position: | chr9:9460031-9459812 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 179-404 |
| Cow position: | chr9:34374873-34375103 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 179-406 |
| Cow position: | chr9:30402374-30402608 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 180-330 |
| Cow position: | chr9:9406004-9406154 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-406 |
| Cow position: | chr9:57131542-57131320 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 181-408 |
| Cow position: | chr9:5456127-5456352 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 99 |
| Conread position: | 182-408 |
| Cow position: | chr9:13169616-13169845 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 182-408 |
| Cow position: | chr9:34024747-34024519 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 183-308 |
| Cow position: | chr9:32982026-32982154 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 183-400 |
| Cow position: | chr9:55256505-55256721 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 127 |
| Conread position: | 183-401 |
| Cow position: | chr9:56453382-56453173 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 183-407 |
| Cow position: | chr9:22440436-22440652 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 186-317 |
| Cow position: | chr9:32794165-32794035 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 186-375 |
| Cow position: | chr9:20637416-20637228 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 186-387 |
| Cow position: | chr9:44758888-44759086 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 186-403 |
| Cow position: | chr9:26344925-26345137 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 186-407 |
| Cow position: | chr9:51620485-51620265 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 187-307 |
| Cow position: | chr9:6685941-6685821 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-311 |
| Cow position: | chr9:34014207-34014331 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-311 |
| Cow position: | chr9:52828699-52828574 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 187-312 |
| Cow position: | chr9:39758560-39758435 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-317 |
| Cow position: | chr9:5763591-5763718 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 187-321 |
| Cow position: | chr9:28754859-28754725 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-324 |
| Cow position: | chr9:7634313-7634176 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-324 |
| Cow position: | chr9:19493424-19493561 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-325 |
| Cow position: | chr9:9686372-9686508 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 187-325 |
| Cow position: | chr9:18342775-18342637 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-325 |
| Cow position: | chr9:55354653-55354515 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-329 |
| Cow position: | chr9:50080998-50081140 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-330 |
| Cow position: | chr9:4267940-4268083 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-330 |
| Cow position: | chr9:6293637-6293493 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-330 |
| Cow position: | chr9:8562862-8562721 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 187-330 |
| Cow position: | chr9:11319592-11319735 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-330 |
| Cow position: | chr9:24243679-24243824 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 187-330 |
| Cow position: | chr9:64064321-64064464 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-331 |
| Cow position: | chr9:23797278-23797133 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-346 |
| Cow position: | chr9:3738182-3738341 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-348 |
| Cow position: | chr9:6596194-6596345 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 187-351 |
| Cow position: | chr9:45171180-45171346 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 187-362 |
| Cow position: | chr9:17740901-17741075 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 187-372 |
| Cow position: | chr9:57897068-57897247 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-373 |
| Cow position: | chr9:33119846-33120036 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 187-384 |
| Cow position: | chr9:29194982-29195188 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 187-384 |
| Cow position: | chr9:54493177-54492982 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 187-384 |
| Cow position: | chr9:58452036-58452226 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 187-385 |
| Cow position: | chr9:64105941-64105746 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 187-386 |
| Cow position: | chr9:21080603-21080415 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 187-386 |
| Cow position: | chr9:22165671-22165875 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 187-386 |
| Cow position: | chr9:22443585-22443781 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-386 |
| Cow position: | chr9:34958014-34958210 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 187-386 |
| Cow position: | chr9:55529837-55529645 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 187-387 |
| Cow position: | chr9:28726682-28726888 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 187-387 |
| Cow position: | chr9:59013300-59013497 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 187-388 |
| Cow position: | chr9:12225936-12226145 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 187-393 |
| Cow position: | chr9:33823160-33822952 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 116, 187 |
| Conread position: | 187-394 |
| Cow position: | chr9:49402693-49402481 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 187-397 |
| Cow position: | chr9:44396703-44396489 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 187-397 |
| Cow position: | chr9:47214503-47214720 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 187-398 |
| Cow position: | chr9:12910359-12910570 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-398 |
| Cow position: | chr9:13743888-13744104 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 187-398 |
| Cow position: | chr9:23955938-23956147 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-398 |
| Cow position: | chr9:56032273-56032487 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 102 |
| Conread position: | 187-399 |
| Cow position: | chr9:43757583-43757373 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 187-399 |
| Cow position: | chr9:48017023-48016818 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 122 |
| Conread position: | 187-400 |
| Cow position: | chr9:11098414-11098623 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 187-400 |
| Cow position: | chr9:12337944-12337728 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 151 |
| Conread position: | 187-400 |
| Cow position: | chr9:17840636-17840851 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 187-400 |
| Cow position: | chr9:25557014-25556811 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 187-400 |
| Cow position: | chr9:38793058-38792843 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 79, 118 |
| Conread position: | 187-401 |
| Cow position: | chr9:12786431-12786649 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 187-401 |
| Cow position: | chr9:39149121-39148908 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 202, 122 |
| Conread position: | 187-401 |
| Cow position: | chr9:41785252-41785048 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 187-402 |
| Cow position: | chr9:24887248-24887031 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 187-402 |
| Cow position: | chr9:41283057-41282838 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 187-402 |
| Cow position: | chr9:61303042-61302829 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-403 |
| Cow position: | chr9:33218913-33219132 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 187-403 |
| Cow position: | chr9:41728300-41728084 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 70 |
| Conread position: | 187-404 |
| Cow position: | chr9:5342206-5342422 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 187-404 |
| Cow position: | chr9:6192417-6192633 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 187-404 |
| Cow position: | chr9:7805919-7806130 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 187-404 |
| Cow position: | chr9:9595908-9596126 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 187-404 |
| Cow position: | chr9:13670676-13670460 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 187-404 |
| Cow position: | chr9:13742565-13742362 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-404 |
| Cow position: | chr9:25375694-25375909 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 140, 67 |
| Conread position: | 187-404 |
| Cow position: | chr9:31359645-31359430 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 187-404 |
| Cow position: | chr9:36490856-36491080 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 187-404 |
| Cow position: | chr9:45141558-45141772 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 187-404 |
| Cow position: | chr9:52763718-52763929 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 187-404 |
| Cow position: | chr9:58131911-58132124 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 187-405 |
| Cow position: | chr9:5433674-5433468 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 187-405 |
| Cow position: | chr9:7611750-7611965 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 187-405 |
| Cow position: | chr9:8998391-8998175 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 202, 101 |
| Conread position: | 187-405 |
| Cow position: | chr9:9311900-9311681 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 187-405 |
| Cow position: | chr9:26477258-26477034 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 112, 101 |
| Conread position: | 187-405 |
| Cow position: | chr9:34283995-34283778 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 141, 112 |
| Conread position: | 187-406 |
| Cow position: | chr9:3378793-3378584 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 187-406 |
| Cow position: | chr9:9552132-9551910 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 141, 117 |
| Conread position: | 187-406 |
| Cow position: | chr9:12281013-12280795 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 95 |
| Conread position: | 187-406 |
| Cow position: | chr9:15805881-15806104 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 111, 101 |
| Conread position: | 187-406 |
| Cow position: | chr9:17799668-17799456 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 187-406 |
| Cow position: | chr9:18380903-18380690 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 187-406 |
| Cow position: | chr9:20091089-20090881 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 187-406 |
| Cow position: | chr9:36458043-36457817 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 187-407 |
| Cow position: | chr9:7952943-7952723 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 182 |
| Conread position: | 187-407 |
| Cow position: | chr9:8628876-8629091 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 187-407 |
| Cow position: | chr9:21292365-21292588 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 187-407 |
| Cow position: | chr9:27279351-27279126 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 187-407 |
| Cow position: | chr9:51720858-51721067 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 202, 30 |
| Conread position: | 187-408 |
| Cow position: | chr9:5104361-5104590 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 187-408 |
| Cow position: | chr9:5110900-5110676 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 105, 92 |
| Conread position: | 187-408 |
| Cow position: | chr9:5500895-5500684 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 187-408 |
| Cow position: | chr9:6954207-6954434 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 94 |
| Conread position: | 187-408 |
| Cow position: | chr9:9403132-9403351 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 187-408 |
| Cow position: | chr9:11299648-11299853 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 187-408 |
| Cow position: | chr9:17872068-17872287 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-408 |
| Cow position: | chr9:19067824-19067589 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 187-408 |
| Cow position: | chr9:26279127-26279353 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 187-408 |
| Cow position: | chr9:28747478-28747698 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 187-408 |
| Cow position: | chr9:34279018-34279239 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 187-408 |
| Cow position: | chr9:34286841-34286618 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-408 |
| Cow position: | chr9:35832577-35832794 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 187-408 |
| Cow position: | chr9:40005516-40005297 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 107, 101 |
| Conread position: | 187-408 |
| Cow position: | chr9:40215285-40215067 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 187-408 |
| Cow position: | chr9:50310724-50310943 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 122, 24 |
| Conread position: | 187-408 |
| Cow position: | chr9:50382286-50382498 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 187-408 |
| Cow position: | chr9:58614533-58614317 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 177, 27 |
| Conread position: | 188-378 |
| Cow position: | chr9:58368956-58369143 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 188-382 |
| Cow position: | chr9:29006598-29006405 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 188-386 |
| Cow position: | chr9:52578497-52578696 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 132, 94 |
| Conread position: | 188-387 |
| Cow position: | chr9:23970855-23971052 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 188-388 |
| Cow position: | chr9:31346990-31346789 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 121, 37 |
| Conread position: | 188-398 |
| Cow position: | chr9:34410355-34410564 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 201, 121 |
| Conread position: | 188-398 |
| Cow position: | chr9:44584634-44584431 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 188-398 |
| Cow position: | chr9:52267717-52267932 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 188-401 |
| Cow position: | chr9:52518782-52518995 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 188-402 |
| Cow position: | chr9:4241447-4241233 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 146 |
| Conread position: | 188-403 |
| Cow position: | chr9:1877965-1878174 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 201, 33 |
| Conread position: | 188-403 |
| Cow position: | chr9:37199168-37198952 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 188-403 |
| Cow position: | chr9:48628069-48627848 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 132, 143 |
| Conread position: | 188-403 |
| Cow position: | chr9:63784873-63785085 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 201, 129 |
| Conread position: | 188-404 |
| Cow position: | chr9:3924484-3924280 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 53 |
| Conread position: | 188-405 |
| Cow position: | chr9:8901186-8901407 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 100 |
| Conread position: | 188-405 |
| Cow position: | chr9:36628159-36627945 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 188-406 |
| Cow position: | chr9:33584645-33584862 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 188-407 |
| Cow position: | chr9:44822283-44822501 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 188-408 |
| Cow position: | chr9:8834092-8834311 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 188-408 |
| Cow position: | chr9:33347449-33347661 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 188-408 |
| Cow position: | chr9:39011428-39011647 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 137, 178 |
| Conread position: | 189-323 |
| Cow position: | chr9:42445943-42446078 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 189-325 |
| Cow position: | chr9:16137302-16137438 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-330 |
| Cow position: | chr9:31079042-31079180 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 189-382 |
| Cow position: | chr9:55438395-55438586 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 189-387 |
| Cow position: | chr9:53762736-53762540 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 189-398 |
| Cow position: | chr9:45285495-45285710 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 189-399 |
| Cow position: | chr9:34484635-34484419 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 99 |
| Conread position: | 189-403 |
| Cow position: | chr9:8992139-8992355 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 146 |
| Conread position: | 189-403 |
| Cow position: | chr9:33151782-33151574 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 189-403 |
| Cow position: | chr9:63361679-63361886 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 189-405 |
| Cow position: | chr9:4341119-4341333 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 189-405 |
| Cow position: | chr9:6840033-6839814 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 189-405 |
| Cow position: | chr9:22466812-22466596 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 185, 113 |
| Conread position: | 189-406 |
| Cow position: | chr9:5327298-5327084 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 189-407 |
| Cow position: | chr9:42062141-42061915 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 189-408 |
| Cow position: | chr9:6952143-6951931 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 189-408 |
| Cow position: | chr9:39315890-39315684 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 202, 36 |
| Conread position: | 189-408 |
| Cow position: | chr9:42586516-42586728 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 191-376 |
| Cow position: | chr9:11030222-11030042 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 158, 53 |
| Conread position: | 191-402 |
| Cow position: | chr9:62631633-62631841 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 126 |
| Conread position: | 192-408 |
| Cow position: | chr9:6189328-6189543 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 192-408 |
| Cow position: | chr9:9723842-9724060 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 193-387 |
| Cow position: | chr9:60395012-60395208 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 193-399 |
| Cow position: | chr9:21460118-21460324 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 193-401 |
| Cow position: | chr9:43680156-43679947 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 193-406 |
| Cow position: | chr9:8636703-8636499 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 196, 123 |
| Conread position: | 193-408 |
| Cow position: | chr9:14738285-14738072 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 195-325 |
| Cow position: | chr9:19758754-19758623 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 195-387 |
| Cow position: | chr9:43159787-43159596 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 195-401 |
| Cow position: | chr9:18226701-18226923 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 120, 195 |
| Conread position: | 195-408 |
| Cow position: | chr9:35306312-35306529 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 120, 156 |
| Conread position: | 196-408 |
| Cow position: | chr9:54681540-54681341 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 198-329 |
| Cow position: | chr9:53750926-53751060 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 123 |
| Conread position: | 198-398 |
| Cow position: | chr9:43202365-43202168 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 201-405 |
| Cow position: | chr9:2397835-2397632 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 201-408 |
| Cow position: | chr9:19771394-19771180 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 203-386 |
| Cow position: | chr9:44944452-44944631 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 203-398 |
| Cow position: | chr9:12773716-12773524 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 203-398 |
| Cow position: | chr9:34707286-34707479 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 203-403 |
| Cow position: | chr9:42508858-42508653 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 57, 99 |
| Conread position: | 204-386 |
| Cow position: | chr9:26394325-26394506 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 204-399 |
| Cow position: | chr9:19718315-19718505 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 205-315 |
| Cow position: | chr9:26277852-26277744 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 205-398 |
| Cow position: | chr9:40603692-40603497 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 205-403 |
| Cow position: | chr9:7543235-7543433 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 108 |
| Conread position: | 205-407 |
| Cow position: | chr9:24079326-24079126 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 207-386 |
| Cow position: | chr9:64310757-64310937 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 209-389 |
| Cow position: | chr9:1712686-1712869 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 214-407 |
| Cow position: | chr9:32052291-32052097 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 216-387 |
| Cow position: | chr9:37955158-37955333 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 218-388 |
| Cow position: | chr9:32773224-32773062 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 218-408 |
| Cow position: | chr9:28315440-28315243 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 81, 69 |
| Conread position: | 219-391 |
| Cow position: | chr9:52998370-52998541 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 108, 44 |
| Conread position: | 219-400 |
| Cow position: | chr9:40984515-40984332 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 219-402 |
| Cow position: | chr9:4263080-4263263 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 219-403 |
| Cow position: | chr9:36401655-36401835 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 219-407 |
| Cow position: | chr9:22447284-22447473 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 104, 156 |
| Conread position: | 219-407 |
| Cow position: | chr9:48900826-48901014 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 148 |
| Conread position: | 219-408 |
| Cow position: | chr9:4256977-4257157 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 221-396 |
| Cow position: | chr9:64140551-64140732 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 222-401 |
| Cow position: | chr9:61022630-61022448 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 222-406 |
| Cow position: | chr9:34423629-34423439 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 222-408 |
| Cow position: | chr9:28722711-28722521 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 224-386 |
| Cow position: | chr9:61300972-61301135 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 224-400 |
| Cow position: | chr9:54630315-54630141 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 148, 92 |
| Conread position: | 225-398 |
| Cow position: | chr9:34276206-34276384 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 225-405 |
| Cow position: | chr9:16115604-16115782 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 226-404 |
| Cow position: | chr9:6237489-6237666 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 227-404 |
| Cow position: | chr9:57642509-57642337 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 228-408 |
| Cow position: | chr9:26388209-26388036 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 229-387 |
| Cow position: | chr9:11873304-11873454 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 229-387 |
| Cow position: | chr9:55807631-55807475 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 229-396 |
| Cow position: | chr9:45740142-45740312 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 229-402 |
| Cow position: | chr9:33101115-33101279 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 229-403 |
| Cow position: | chr9:34265095-34264908 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 147 |
| Conread position: | 229-407 |
| Cow position: | chr9:23840394-23840584 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 229-408 |
| Cow position: | chr9:11380646-11380825 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-405 |
| Cow position: | chr9:5172534-5172709 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 147 |
| Conread position: | 230-405 |
| Cow position: | chr9:11447809-11447984 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 230-408 |
| Cow position: | chr9:14519382-14519555 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 230-408 |
| Cow position: | chr9:20579595-20579768 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 231-396 |
| Cow position: | chr9:2037439-2037268 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 232-387 |
| Cow position: | chr9:17769315-17769162 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 232-399 |
| Cow position: | chr9:20406649-20406483 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 232-408 |
| Cow position: | chr9:44918283-44918458 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 130, 73 |
| Conread position: | 236-387 |
| Cow position: | chr9:30123922-30123771 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-398 |
| Cow position: | chr9:5186871-5187030 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 236-401 |
| Cow position: | chr9:34666437-34666279 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 236-408 |
| Cow position: | chr9:9495149-9494979 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 236-408 |
| Cow position: | chr9:12269023-12268855 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 236-408 |
| Cow position: | chr9:53323791-53323968 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 237-407 |
| Cow position: | chr9:28773131-28772962 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 241-405 |
| Cow position: | chr9:1917967-1917805 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 248-402 |
| Cow position: | chr9:30194992-30194837 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 263-408 |
| Cow position: | chr9:21816497-21816351 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 308-406 |
| Cow position: | chr9:26086643-26086545 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.