Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 145-330 |
| Cow position: | chr12:15984779-15984594 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 150-349 |
| Cow position: | chr12:34090098-34090299 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 151-323 |
| Cow position: | chr12:5497854-5497679 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 153-332 |
| Cow position: | chr12:36109291-36109102 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 154-324 |
| Cow position: | chr12:42477983-42478155 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 155-321 |
| Cow position: | chr12:34849879-34849711 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 155-321 |
| Cow position: | chr12:34852516-34852348 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 156-322 |
| Cow position: | chr12:11081124-11080950 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 159-309 |
| Cow position: | chr12:27055585-27055739 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 159-328 |
| Cow position: | chr12:29448625-29448799 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 162-328 |
| Cow position: | chr12:40931631-40931460 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 164-327 |
| Cow position: | chr12:15230832-15230667 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 165-285 |
| Cow position: | chr12:8981068-8980945 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 166-280 |
| Cow position: | chr12:10846661-10846551 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 166-288 |
| Cow position: | chr12:30596453-30596579 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 166-295 |
| Cow position: | chr12:32413502-32413633 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 166-297 |
| Cow position: | chr12:16850927-16850791 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 166-319 |
| Cow position: | chr12:5658758-5658600 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 166-319 |
| Cow position: | chr12:13657757-13657607 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 166-324 |
| Cow position: | chr12:39781353-39781189 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-328 |
| Cow position: | chr12:4582932-4583097 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 166-332 |
| Cow position: | chr12:24559344-24559512 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 166-336 |
| Cow position: | chr12:31198753-31198927 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 167-329 |
| Cow position: | chr12:18093877-18094046 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 170-287 |
| Cow position: | chr12:43671693-43671811 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 170-287 |
| Cow position: | chr12:44057506-44057624 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 170-318 |
| Cow position: | chr12:11520163-11520318 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 177-321 |
| Cow position: | chr12:24681816-24681961 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 180-321 |
| Cow position: | chr12:7996411-7996559 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 191-322 |
| Cow position: | chr12:42918478-42918612 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 198-330 |
| Cow position: | chr12:9780252-9780118 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 38 |
Show alignments to all cow chromosomes.