Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 140-330 |
| Cow position: | chr14:39058625-39058423 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 144-353 |
| Cow position: | chr14:20795814-20795601 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 148-328 |
| Cow position: | chr14:36080878-36081065 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 150-322 |
| Cow position: | chr14:37624736-37624914 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 152 |
| Conread position: | 153-289 |
| Cow position: | chr14:28565327-28565196 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 159-288 |
| Cow position: | chr14:47519727-47519858 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 159-289 |
| Cow position: | chr14:19022873-19023004 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 159-330 |
| Cow position: | chr14:21691250-21691429 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 163-289 |
| Cow position: | chr14:20045572-20045444 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 164-310 |
| Cow position: | chr14:8875028-8875177 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 164-310 |
| Cow position: | chr14:28605253-28605099 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 164-332 |
| Cow position: | chr14:47604279-47604452 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 166-286 |
| Cow position: | chr14:23107341-23107218 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-310 |
| Cow position: | chr14:26805033-26805185 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-310 |
| Cow position: | chr14:37678986-37679136 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-321 |
| Cow position: | chr14:44032053-44031891 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-322 |
| Cow position: | chr14:26108650-26108488 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 166-323 |
| Cow position: | chr14:26153253-26153415 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 166-324 |
| Cow position: | chr14:2189650-2189488 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 166-324 |
| Cow position: | chr14:7648001-7648167 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-325 |
| Cow position: | chr14:6441926-6441765 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 166-347 |
| Cow position: | chr14:44861219-44861401 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 168-291 |
| Cow position: | chr14:5400601-5400475 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 168-354 |
| Cow position: | chr14:43565863-43566047 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 124 |
| Conread position: | 169-289 |
| Cow position: | chr14:16969080-16969199 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 170-289 |
| Cow position: | chr14:20284168-20284046 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 170-327 |
| Cow position: | chr14:20701802-20701961 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 170-332 |
| Cow position: | chr14:6984948-6985107 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 173-319 |
| Cow position: | chr14:5677370-5677221 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 108, 66 |
| Conread position: | 182-328 |
| Cow position: | chr14:47693697-47693548 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 189-326 |
| Cow position: | chr14:22459864-22459999 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 47 |
Show alignments to all cow chromosomes.