Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 148-289 |
| Cow position: | chr17:9748789-9748934 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 148-323 |
| Cow position: | chr17:144133-143957 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 153-284 |
| Cow position: | chr17:21373729-21373859 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 154-327 |
| Cow position: | chr17:30236248-30236423 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 162-373 |
| Cow position: | chr17:27819355-27819571 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 164-328 |
| Cow position: | chr17:2271062-2271230 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 165-311 |
| Cow position: | chr17:728289-728144 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 43 |
| Conread position: | 166-287 |
| Cow position: | chr17:19891689-19891812 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 166-287 |
| Cow position: | chr17:24880805-24880928 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 166-289 |
| Cow position: | chr17:1328663-1328787 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 166-289 |
| Cow position: | chr17:10220916-10221039 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 67 |
| Conread position: | 166-289 |
| Cow position: | chr17:14278127-14278253 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 166-317 |
| Cow position: | chr17:13229443-13229600 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 166-318 |
| Cow position: | chr17:36173908-36173743 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 166-321 |
| Cow position: | chr17:8279642-8279488 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 166-322 |
| Cow position: | chr17:7205486-7205647 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 166-322 |
| Cow position: | chr17:31798383-31798222 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 166-324 |
| Cow position: | chr17:36400167-36400327 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 166-325 |
| Cow position: | chr17:10314486-10314652 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 166-325 |
| Cow position: | chr17:29270791-29270636 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 166-325 |
| Cow position: | chr17:36818105-36818267 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 67 |
| Conread position: | 166-329 |
| Cow position: | chr17:3620021-3619852 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 166-330 |
| Cow position: | chr17:10769446-10769274 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-330 |
| Cow position: | chr17:27505162-27505332 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 166-332 |
| Cow position: | chr17:8093912-8094078 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 166-334 |
| Cow position: | chr17:1525758-1525590 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-335 |
| Cow position: | chr17:8215257-8215428 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-340 |
| Cow position: | chr17:35387936-35387763 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-352 |
| Cow position: | chr17:11655442-11655630 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 168-322 |
| Cow position: | chr17:37043349-37043198 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 170-284 |
| Cow position: | chr17:27781135-27781251 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 170-292 |
| Cow position: | chr17:7595219-7595341 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-310 |
| Cow position: | chr17:37138830-37138969 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 170-328 |
| Cow position: | chr17:12768739-12768578 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 170-330 |
| Cow position: | chr17:6570071-6569912 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 115, 56 |
| Conread position: | 170-330 |
| Cow position: | chr17:32457500-32457335 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 181-329 |
| Cow position: | chr17:18173748-18173596 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 184-303 |
| Cow position: | chr17:35212440-35212565 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.