Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 145-323 |
| Cow position: | chr18:15831627-15831446 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 148-280 |
| Cow position: | chr18:23424891-23425026 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 148-319 |
| Cow position: | chr18:19363908-19364084 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 151-328 |
| Cow position: | chr18:30566582-30566410 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 153-331 |
| Cow position: | chr18:48717960-48717782 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 154-297 |
| Cow position: | chr18:7592639-7592790 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 159-310 |
| Cow position: | chr18:32909034-32909184 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 159-319 |
| Cow position: | chr18:43555091-43554930 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 159-353 |
| Cow position: | chr18:26372904-26373100 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 163-309 |
| Cow position: | chr18:44408405-44408552 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 163-323 |
| Cow position: | chr18:38126459-38126294 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 166-288 |
| Cow position: | chr18:16726640-16726764 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 166-288 |
| Cow position: | chr18:43113953-43113833 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 166-289 |
| Cow position: | chr18:248824-248698 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 166-289 |
| Cow position: | chr18:45961280-45961156 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 166-301 |
| Cow position: | chr18:15689277-15689415 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-310 |
| Cow position: | chr18:2438771-2438624 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 166-320 |
| Cow position: | chr18:21706192-21706038 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-320 |
| Cow position: | chr18:49940718-49940565 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 166-321 |
| Cow position: | chr18:33843093-33842931 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 166-321 |
| Cow position: | chr18:50700679-50700837 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 166-325 |
| Cow position: | chr18:20127114-20126951 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 151 |
| Conread position: | 166-327 |
| Cow position: | chr18:44493494-44493332 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 166-329 |
| Cow position: | chr18:42061068-42061226 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 166-335 |
| Cow position: | chr18:28297873-28297696 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 166-344 |
| Cow position: | chr18:51271761-51271569 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 167-319 |
| Cow position: | chr18:48458667-48458821 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 168-310 |
| Cow position: | chr18:51298476-51298622 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 169-340 |
| Cow position: | chr18:25970640-25970475 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 170-287 |
| Cow position: | chr18:44400442-44400561 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 170-318 |
| Cow position: | chr18:7409306-7409153 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-324 |
| Cow position: | chr18:6157909-6158065 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 177-332 |
| Cow position: | chr18:14520038-14520197 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 180-330 |
| Cow position: | chr18:39503691-39503538 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 180-333 |
| Cow position: | chr18:28794843-28795001 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 125 |
| Conread position: | 188-322 |
| Cow position: | chr18:16448557-16448692 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 48 |
Show alignments to all cow chromosomes.