Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 152-335 |
| Cow position: | chr2:20915979-20915795 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 152-337 |
| Cow position: | chr2:2690043-2690230 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 153-328 |
| Cow position: | chr2:304372-304196 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 157-320 |
| Cow position: | chr2:41313909-41314074 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 159-324 |
| Cow position: | chr2:62384666-62384492 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 159-326 |
| Cow position: | chr2:51062091-51062259 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 159-330 |
| Cow position: | chr2:33596640-33596461 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 159-330 |
| Cow position: | chr2:67759132-67758955 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 160-289 |
| Cow position: | chr2:62464163-62464035 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 161-321 |
| Cow position: | chr2:50515154-50515316 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 163-289 |
| Cow position: | chr2:33659680-33659551 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 164-329 |
| Cow position: | chr2:7720891-7720718 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 165-310 |
| Cow position: | chr2:72902264-72902112 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 166-286 |
| Cow position: | chr2:425840-425961 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-289 |
| Cow position: | chr2:56884446-56884570 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 166-289 |
| Cow position: | chr2:68981985-68981859 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-301 |
| Cow position: | chr2:24106421-24106558 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 121 |
| Conread position: | 166-309 |
| Cow position: | chr2:25084713-25084861 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 166-320 |
| Cow position: | chr2:48748701-48748544 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-321 |
| Cow position: | chr2:17427196-17427358 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 166-322 |
| Cow position: | chr2:29382654-29382488 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 166-323 |
| Cow position: | chr2:8245541-8245708 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-325 |
| Cow position: | chr2:15162770-15162929 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 166-326 |
| Cow position: | chr2:13604494-13604662 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 166-326 |
| Cow position: | chr2:41765515-41765671 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 166-326 |
| Cow position: | chr2:70664042-70664204 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 166-327 |
| Cow position: | chr2:46783541-46783702 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 166-327 |
| Cow position: | chr2:64226503-64226670 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 166-328 |
| Cow position: | chr2:56269589-56269423 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 166-329 |
| Cow position: | chr2:26042215-26042044 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 166-330 |
| Cow position: | chr2:51041590-51041417 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-330 |
| Cow position: | chr2:73999750-73999918 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-334 |
| Cow position: | chr2:41057498-41057325 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 166-336 |
| Cow position: | chr2:1651429-1651598 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 119, 37 |
| Conread position: | 166-345 |
| Cow position: | chr2:42925316-42925503 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 167-301 |
| Cow position: | chr2:17341911-17342045 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 170-282 |
| Cow position: | chr2:32453499-32453388 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 170-289 |
| Cow position: | chr2:2937589-2937708 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-324 |
| Cow position: | chr2:32836221-32836378 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 146 |
| Conread position: | 170-325 |
| Cow position: | chr2:36294853-36295019 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 170-326 |
| Cow position: | chr2:72583950-72584113 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 170-328 |
| Cow position: | chr2:77982118-77981961 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 170-329 |
| Cow position: | chr2:31155737-31155902 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-332 |
| Cow position: | chr2:45435127-45435295 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 170-358 |
| Cow position: | chr2:13466062-13466247 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 181-289 |
| Cow position: | chr2:68975888-68975994 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 196-327 |
| Cow position: | chr2:85460975-85460843 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 40 |
Show alignments to all cow chromosomes.