Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 145-348 |
| Cow position: | chr21:15742019-15741812 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 148-326 |
| Cow position: | chr21:33947184-33947001 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 170 |
| Conread position: | 148-345 |
| Cow position: | chr21:46242172-46241972 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 148-350 |
| Cow position: | chr21:4098938-4099141 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 150-292 |
| Cow position: | chr21:18941763-18941618 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 151-334 |
| Cow position: | chr21:11675980-11675789 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 154-329 |
| Cow position: | chr21:13358405-13358586 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 165 |
| Conread position: | 157-320 |
| Cow position: | chr21:23786110-23786274 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 159-318 |
| Cow position: | chr21:26147158-26147325 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 159-319 |
| Cow position: | chr21:22353157-22352989 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 159-322 |
| Cow position: | chr21:17428576-17428747 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 159-331 |
| Cow position: | chr21:2413133-2413309 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 159-332 |
| Cow position: | chr21:4276522-4276343 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 160-310 |
| Cow position: | chr21:41197964-41197813 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 163-328 |
| Cow position: | chr21:3254237-3254409 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 163-330 |
| Cow position: | chr21:30150156-30149989 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 166-290 |
| Cow position: | chr21:46607502-46607379 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 166-319 |
| Cow position: | chr21:44220451-44220613 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-321 |
| Cow position: | chr21:22398250-22398397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 166-324 |
| Cow position: | chr21:49661747-49661588 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 166-326 |
| Cow position: | chr21:47715454-47715290 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 166-327 |
| Cow position: | chr21:23801040-23800878 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-329 |
| Cow position: | chr21:25286605-25286772 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 166-339 |
| Cow position: | chr21:9353535-9353719 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 166-359 |
| Cow position: | chr21:8671485-8671679 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 166-359 |
| Cow position: | chr21:45355921-45356124 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 167-328 |
| Cow position: | chr21:9940099-9939938 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 61 |
| Conread position: | 167-330 |
| Cow position: | chr21:34565124-34564960 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 168-312 |
| Cow position: | chr21:13418145-13417998 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 75 |
| Conread position: | 168-320 |
| Cow position: | chr21:37121121-37120963 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 168-321 |
| Cow position: | chr21:25800490-25800644 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 169-320 |
| Cow position: | chr21:31662095-31662248 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 170-289 |
| Cow position: | chr21:35997264-35997385 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-323 |
| Cow position: | chr21:17807045-17806888 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 170-324 |
| Cow position: | chr21:31576584-31576741 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-326 |
| Cow position: | chr21:30053329-30053165 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 170-337 |
| Cow position: | chr21:31004584-31004408 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.