Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 145-301 |
| Cow position: | chr25:5365533-5365696 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 146-329 |
| Cow position: | chr25:18448812-18448997 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 146-333 |
| Cow position: | chr25:18239509-18239701 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 149-289 |
| Cow position: | chr25:13560204-13560067 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 152-332 |
| Cow position: | chr25:27534676-27534502 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 152-336 |
| Cow position: | chr25:12932633-12932823 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 153-289 |
| Cow position: | chr25:40956976-40956840 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 153-444 |
| Cow position: | chr25:14570383-14570670 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 165-289 |
| Cow position: | chr25:20885064-20884941 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 165-290 |
| Cow position: | chr25:18161308-18161431 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 165-323 |
| Cow position: | chr25:9109363-9109525 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 120, 68 |
| Conread position: | 166-289 |
| Cow position: | chr25:8080750-8080873 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 166-289 |
| Cow position: | chr25:23248718-23248594 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 166-289 |
| Cow position: | chr25:26240561-26240686 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 166-296 |
| Cow position: | chr25:34379083-34378951 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 166-297 |
| Cow position: | chr25:10748478-10748347 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 166-300 |
| Cow position: | chr25:27504175-27504041 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 166-310 |
| Cow position: | chr25:8576716-8576866 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 166-312 |
| Cow position: | chr25:17911489-17911636 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 166-320 |
| Cow position: | chr25:26457655-26457495 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 166-321 |
| Cow position: | chr25:18000507-18000348 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 166-326 |
| Cow position: | chr25:20614747-20614911 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 166-327 |
| Cow position: | chr25:14075326-14075487 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 166-327 |
| Cow position: | chr25:33205056-33204895 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 166-330 |
| Cow position: | chr25:13321204-13321371 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 166-331 |
| Cow position: | chr25:22575502-22575335 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 166-335 |
| Cow position: | chr25:27534896-27534721 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 166-337 |
| Cow position: | chr25:8512065-8511891 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 166-339 |
| Cow position: | chr25:24405711-24405531 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-339 |
| Cow position: | chr25:41094113-41093941 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 168-323 |
| Cow position: | chr25:24136417-24136259 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 170-289 |
| Cow position: | chr25:18228204-18228323 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 170-327 |
| Cow position: | chr25:37372445-37372286 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 173-330 |
| Cow position: | chr25:11040968-11041127 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 189-376 |
| Cow position: | chr25:18810910-18811095 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 47 |
Show alignments to all cow chromosomes.